RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 Q6ZQT0 140 aa12.5□□□□□ -0.41
SMCO4-203ENST00000526869 SMIM29Q86T20 159 aa12.5□□□□□ -0.41
SMCO4-203ENST00000526869 BIRC6Q9NR09 4857 aa12.49□□□□□ -0.41
SMCO4-203ENST00000526869 GAGE2AQ6NT46 116 aa12.49□□□□□ -0.41
SMCO4-203ENST00000526869 HAMPP81172 84 aa12.48□□□□□ -0.41
SMCO4-203ENST00000526869 SPRR4Q96PI1 79 aa12.47□□□□□ -0.41
SMCO4-203ENST00000526869 F8WEM9 126 aa12.46□□□□□ -0.41
SMCO4-203ENST00000526869 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
SMCO4-203ENST00000526869 IGLV8-61A0A075B6I0 122 aa12.45□□□□□ -0.42
SMCO4-203ENST00000526869 LINC00483Q53H64 154 aa12.45□□□□□ -0.42
SMCO4-203ENST00000526869 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
SMCO4-203ENST00000526869 SRRM2Q9UQ35 2752 aaKnown RBP12.44□□□□□ -0.42
SMCO4-203ENST00000526869 XGP55808 180 aa12.43□□□□□ -0.42
SMCO4-203ENST00000526869 CDIP1Q9H305 208 aa12.43□□□□□ -0.42
SMCO4-203ENST00000526869 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
SMCO4-203ENST00000526869 A0A1B0GW54 56 aa12.36□□□□□ -0.43
SMCO4-203ENST00000526869 Q6JHZ5 121 aa12.36□□□□□ -0.43
SMCO4-203ENST00000526869 RPL37AP61513 92 aaKnown RBP12.35□□□□□ -0.43
SMCO4-203ENST00000526869 Q8NBF4 154 aa12.33□□□□□ -0.44
SMCO4-203ENST00000526869 LINC00846Q9NV44 126 aa12.33□□□□□ -0.44
SMCO4-203ENST00000526869 EPPK1P58107 5090 aaKnown RBP12.32□□□□□ -0.44
SMCO4-203ENST00000526869 IGFL1Q6UW32 110 aa12.31□□□□□ -0.44
SMCO4-203ENST00000526869 A0A1W2PNM2 257 aa12.3□□□□□ -0.44
SMCO4-203ENST00000526869 LINC00643Q86TS7 51 aa12.29□□□□□ -0.44
SMCO4-203ENST00000526869 UBL5Q9BZL1 73 aa12.27□□□□□ -0.45
SMCO4-203ENST00000526869 SIGMAR1Q99720 223 aa12.26□□□□□ -0.45
SMCO4-203ENST00000526869 CDK2AP2O75956 126 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 CRYGAP11844 174 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 FAM229BQ4G0N7 80 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 Q6Q795 121 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 VPS13BQ7Z7G8 4022 aa12.25□□□□□ -0.45
SMCO4-203ENST00000526869 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
SMCO4-203ENST00000526869 SMR3BP02814 79 aaPredicted RBP12.24□□□□□ -0.45
SMCO4-203ENST00000526869 C9orf153Q5TBE3 101 aa12.23□□□□□ -0.45
SMCO4-203ENST00000526869 MT-ATP8P03928 68 aa12.21□□□□□ -0.45
SMCO4-203ENST00000526869 ANAPC11Q9NYG5 84 aa12.21□□□□□ -0.45
SMCO4-203ENST00000526869 KRTAP10-4P60372 401 aaPredicted RBP12.2□□□□□ -0.46
SMCO4-203ENST00000526869 Q6ZVQ6 151 aa12.2□□□□□ -0.46
SMCO4-203ENST00000526869 TRBV7-7A0A0K0K1E9 115 aa12.19□□□□□ -0.46
SMCO4-203ENST00000526869 MOBPQ13875 183 aa12.19□□□□□ -0.46
SMCO4-203ENST00000526869 ATP5EP2Q5VTU8 51 aa12.19□□□□□ -0.46
SMCO4-203ENST00000526869 A0A0G2JQZ4 141 aa12.17□□□□□ -0.46
SMCO4-203ENST00000526869 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
SMCO4-203ENST00000526869 SSBP3-AS1Q7Z2R9 100 aa12.16□□□□□ -0.46
SMCO4-203ENST00000526869 PLA2G1BP04054 148 aaKnown RBP12.14□□□□□ -0.47
SMCO4-203ENST00000526869 NREPQ16612 68 aa12.14□□□□□ -0.47
SMCO4-203ENST00000526869 FAM229AH3BQW9 127 aa12.13□□□□□ -0.47
SMCO4-203ENST00000526869 IMUPQ9GZP8 106 aa12.13□□□□□ -0.47
SMCO4-203ENST00000526869 FAT1Q14517 4588 aa12.11□□□□□ -0.47
SMCO4-203ENST00000526869 A0A087WSZ3 146 aa12.1□□□□□ -0.47
SMCO4-203ENST00000526869 A0A087X002 238 aa12.1□□□□□ -0.47
SMCO4-203ENST00000526869 CXCL6P80162 114 aa12.1□□□□□ -0.47
SMCO4-203ENST00000526869 CD164Q04900 197 aa12.1□□□□□ -0.47
SMCO4-203ENST00000526869 KRTAP13-2Q52LG2 175 aa12.09□□□□□ -0.47
SMCO4-203ENST00000526869 IGKV3D-7A0A0C4DH55 119 aa12.07□□□□□ -0.48
SMCO4-203ENST00000526869 HSPG2P98160 4391 aa12.06□□□□□ -0.48
SMCO4-203ENST00000526869 PKHD1L1Q86WI1 4243 aa12.05□□□□□ -0.48
SMCO4-203ENST00000526869 SCGB1A1P11684 91 aa12.04□□□□□ -0.48
SMCO4-203ENST00000526869 SS18L2Q9UHA2 77 aa12.04□□□□□ -0.48
SMCO4-203ENST00000526869 BPY2O14599 106 aa12.02□□□□□ -0.49
SMCO4-203ENST00000526869 Q5VSD8 79 aa12.02□□□□□ -0.49
SMCO4-203ENST00000526869 RYR1P21817 5038 aa12.02□□□□□ -0.49
SMCO4-203ENST00000526869 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
SMCO4-203ENST00000526869 TYMSOSQ8TAI1 123 aa11.97□□□□□ -0.49
SMCO4-203ENST00000526869 LINC00472Q9H8W2 130 aa11.96□□□□□ -0.49
SMCO4-203ENST00000526869 J3KT08 172 aa11.93□□□□□ -0.5
SMCO4-203ENST00000526869 HIST1H4AP62805 103 aaKnown RBP11.93□□□□□ -0.5
SMCO4-203ENST00000526869 Q5XG85 94 aa11.93□□□□□ -0.5
SMCO4-203ENST00000526869 Q8N1X5 172 aa11.93□□□□□ -0.5
SMCO4-203ENST00000526869 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
SMCO4-203ENST00000526869 ASB16-AS1Q495Z4 193 aa11.92□□□□□ -0.5
SMCO4-203ENST00000526869 PCLOQ9Y6V0 5065 aa11.91□□□□□ -0.5
SMCO4-203ENST00000526869 DSCR10P59022 87 aa11.91□□□□□ -0.5
SMCO4-203ENST00000526869 Q96NJ1 140 aa11.89□□□□□ -0.51
SMCO4-203ENST00000526869 IGKV4-1P06312 121 aa11.88□□□□□ -0.51
SMCO4-203ENST00000526869 C4orf48Q5BLP8 95 aa11.88□□□□□ -0.51
SMCO4-203ENST00000526869 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
SMCO4-203ENST00000526869 A0A087WVE0 104 aa11.87□□□□□ -0.51
SMCO4-203ENST00000526869 SPINK1P00995 79 aa11.87□□□□□ -0.51
SMCO4-203ENST00000526869 LIMD2Q9BT23 127 aa11.87□□□□□ -0.51
SMCO4-203ENST00000526869 RPS29P62273 56 aaKnown RBP11.86□□□□□ -0.51
SMCO4-203ENST00000526869 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
SMCO4-203ENST00000526869 FAM236AA0A1B0GUQ0 79 aa11.85□□□□□ -0.51
SMCO4-203ENST00000526869 FAM236BA0A1B0GV22 79 aa11.85□□□□□ -0.51
SMCO4-203ENST00000526869 DEFB116Q30KQ4 102 aa11.85□□□□□ -0.51
SMCO4-203ENST00000526869 LINC00304Q8N9R0 145 aa11.85□□□□□ -0.51
SMCO4-203ENST00000526869 Q8N9L7 120 aa11.84□□□□□ -0.51
SMCO4-203ENST00000526869 A8MWP4 228 aa11.83□□□□□ -0.52
SMCO4-203ENST00000526869 K7EQZ3 153 aa11.82□□□□□ -0.52
SMCO4-203ENST00000526869 NDUFB1O75438 58 aa11.78□□□□□ -0.52
SMCO4-203ENST00000526869 PRR15Q8IV56 129 aa11.78□□□□□ -0.52
SMCO4-203ENST00000526869 ATOX1O00244 68 aa11.75□□□□□ -0.53
SMCO4-203ENST00000526869 KRTAP10-8P60410 259 aa11.74□□□□□ -0.53
SMCO4-203ENST00000526869 HERC2O95714 4834 aa11.74□□□□□ -0.53
SMCO4-203ENST00000526869 C1orf195Q5TG92 126 aa11.73□□□□□ -0.53
SMCO4-203ENST00000526869 A0A1B0GVX0 72 aa11.7□□□□□ -0.54
SMCO4-203ENST00000526869 HCG22E2RYF7 251 aa11.7□□□□□ -0.54
SMCO4-203ENST00000526869 ANAPC13Q9BS18 74 aa11.69□□□□□ -0.54
SMCO4-203ENST00000526869 PCP4P48539 62 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms