RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 FAM24AA6NFZ4 105 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 K7EP34 96 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 SMR3BP02814 79 aaPredicted RBP-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 IGLC2P0DOY2 106 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 IGLC3P0DOY3 106 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 C1orf54Q8WWF1 131 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 CFAP43Q8NDM7 1665 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 MAGI3Q5TCQ9 1506 aa-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 VPS13CQ709C8 3753 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 PPLO60437 1756 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 TLN1Q9Y490 2541 aaKnown RBP-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 FREM2Q5SZK8 3169 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 COX7BP24311 80 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 VAMP8Q9BV40 100 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 DIP2BQ9P265 1576 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 ATP7BP35670 1465 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 ITPR2Q14571 2701 aa-0.8□□□□□ -2.54
CSDE1-210ENST00000525878 RNF17Q9BXT8 1623 aaKnown RBP-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 MPC2O95563 127 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 MT1EP04732 61 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 KRTDAPP60985 99 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 PMCHL1Q16048 86 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 TRGV9Q99603 122 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 PSENENQ9NZ42 101 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 UBE2D4Q9Y2X8 147 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 AP4S1Q9Y587 144 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 EPRSP07814 1512 aaKnown RBP-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 FANCAO15360 1455 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 KIF1AQ12756 1690 aa-0.81□□□□□ -2.54
CSDE1-210ENST00000525878 NDUFC1O43677 76 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 SNAPC5O75971 98 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 MT1HL1P0DM35 61 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 GNG4P50150 75 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 PPP3R1P63098 170 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 CCDC58Q4VC31 144 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 SVBPQ8N300 66 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 PRO3102Q9H379 93 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 ZFHX4Q86UP3 3567 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 RICTORQ6R327 1708 aa-0.82□□□□□ -2.54
CSDE1-210ENST00000525878 ANKRD36BQ8N2N9 1353 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 LRRIQ1Q96JM4 1722 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 BOD1L1Q8NFC6 3051 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 NHSQ6T4R5 1651 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 FYCO1Q9BQS8 1478 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 LCE6AA0A183 80 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 F8WEM9 126 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 LYNX1G3V0Z9 82 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 CORTO00230 105 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 DLEU1O43261 78 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 UQCRHP07919 91 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 HMGN3Q15651 99 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 KRTAP8-1Q8IUC2 63 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 MT1LQ93083 61 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 PIK3C2BO00750 1634 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 PRUNE2Q8WUY3 3088 aa-0.83□□□□□ -2.54
CSDE1-210ENST00000525878 NRAPQ86VF7 1730 aa-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 C3orf79P0CE67 100 aa-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 LINC00158P58513 81 aa-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 ETDBQ3ZM63 59 aa-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 A0A1B0GUL6 1792 aa-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 THOC2Q8NI27 1593 aaKnown RBP-0.84□□□□□ -2.54
CSDE1-210ENST00000525878 MYO15AQ9UKN7 3530 aa-0.85□□□□□ -2.54
CSDE1-210ENST00000525878 A0A1B0GV90 55 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 D6R8Y8 96 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 LEPROTL1O95214 131 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 MT-ATP8P03928 68 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 DEFB130BP0DP73 79 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 DEFB130AP0DP74 79 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 RPL38P63173 70 aaKnown RBP-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 S100A12P80511 92 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 ALKAL2Q6UX46 152 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 MUSTN1Q8IVN3 82 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 DEFB106AQ8N104 65 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 SERP2Q8N6R1 65 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 TSC22D3Q99576 134 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 FAM107BQ9H098 131 aa-0.85□□□□□ -2.55
CSDE1-210ENST00000525878 ATP10BO94823 1461 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 ABCC10Q5T3U5 1492 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 TMEM218A2RU14 115 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 ATOX1O00244 68 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 GNGT2O14610 69 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 HMGN1P05114 100 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 IAPPP10997 89 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 MT1GP13640 62 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 RPL13AP3Q6NVV1 102 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 PMCHL2Q9BQD1 86 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 NEXMIFQ5QGS0 1516 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 MAP3K4Q9Y6R4 1608 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 TEX14Q8IWB6 1497 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 MYO5CQ9NQX4 1742 aa-0.86□□□□□ -2.55
CSDE1-210ENST00000525878 CFAP54Q96N23 3096 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 CEP162Q5TB80 1403 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 KIAA0586Q9BVV6 1533 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 TRAV21A0A0B4J279 112 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 A0A1B0GUT8 65 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 S100A1P23297 94 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 CLPSL2Q6UWE3 100 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 ZNF720Q7Z2F6 126 aa-0.87□□□□□ -2.55
CSDE1-210ENST00000525878 GAFA1Q96PS6 74 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms