RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 BIN3Q9NQY0 253 aa2.88□□□□□ -1.95
NEDD8-203ENST00000524927 SPANXCQ9NY87 97 aa2.88□□□□□ -1.95
NEDD8-203ENST00000524927 MP68P56378 58 aa2.87□□□□□ -1.95
NEDD8-203ENST00000524927 ZNF625Q96I27 306 aaPredicted RBP2.87□□□□□ -1.95
NEDD8-203ENST00000524927 Q9BRP9 147 aa2.87□□□□□ -1.95
NEDD8-203ENST00000524927 C2orf88Q9BSF0 95 aa2.87□□□□□ -1.95
NEDD8-203ENST00000524927 LINC00587B1AMM8 73 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 C8orf87E5RJ46 101 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 ARPC5O15511 151 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 ATP6V0CP27449 155 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 SMIM3Q9BZL3 60 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 PRO1933Q9H354 126 aa2.86□□□□□ -1.95
NEDD8-203ENST00000524927 A0A087WXM4 84 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 TMEM250H0YL14 139 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 TCL1BO95988 128 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 PPP1R17O96001 155 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 SERF2P84101 59 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 VPS25Q9BRG1 176 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 PSMG3Q9BT73 122 aaPredicted RBP2.85□□□□□ -1.95
NEDD8-203ENST00000524927 TNFSF18Q9UNG2 199 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
NEDD8-203ENST00000524927 TRBV24-1A0A075B6N3 115 aa2.84□□□□□ -1.95
NEDD8-203ENST00000524927 PDE6DO43924 150 aa2.84□□□□□ -1.95
NEDD8-203ENST00000524927 IFI27P40305 119 aaPredicted RBP2.84□□□□□ -1.95
NEDD8-203ENST00000524927 OR13C6PQ8NH95 151 aa2.84□□□□□ -1.95
NEDD8-203ENST00000524927 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
NEDD8-203ENST00000524927 TMEM191AQ9H0A3 160 aa2.84□□□□□ -1.95
NEDD8-203ENST00000524927 NAP1L6A6NFF2 107 aa2.83□□□□□ -1.96
NEDD8-203ENST00000524927 SPRR1BP22528 89 aa2.83□□□□□ -1.96
NEDD8-203ENST00000524927 RBM3P98179 157 aaKnown RBP2.83□□□□□ -1.96
NEDD8-203ENST00000524927 Q6ZRX8 168 aa2.83□□□□□ -1.96
NEDD8-203ENST00000524927 TMEM141Q96I45 108 aa2.83□□□□□ -1.96
NEDD8-203ENST00000524927 CTXND1A0A1B0GTU2 59 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 A0A1B0GV90 55 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 AKR1D1P51857 326 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 SIGMAR1Q99720 223 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 MAP1LC3AQ9H492 121 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 LAMTOR3Q9UHA4 124 aa2.82□□□□□ -1.96
NEDD8-203ENST00000524927 TRBV20OR9-2A0A075B6H5 130 aa2.81□□□□□ -1.96
NEDD8-203ENST00000524927 K7ERU9 68 aa2.81□□□□□ -1.96
NEDD8-203ENST00000524927 DLEU1O43261 78 aa2.81□□□□□ -1.96
NEDD8-203ENST00000524927 HERVK_113P63121 156 aa2.81□□□□□ -1.96
NEDD8-203ENST00000524927 SEC11AP67812 179 aa2.81□□□□□ -1.96
NEDD8-203ENST00000524927 A0A1W2PNM2 257 aa2.8□□□□□ -1.96
NEDD8-203ENST00000524927 COX17Q14061 63 aa2.8□□□□□ -1.96
NEDD8-203ENST00000524927 A0A1B0GU33 70 aa2.79□□□□□ -1.96
NEDD8-203ENST00000524927 A0A1B0GV50 99 aa2.79□□□□□ -1.96
NEDD8-203ENST00000524927 TINCRA0A1B0GVN0 87 aa2.79□□□□□ -1.96
NEDD8-203ENST00000524927 RPL35P42766 123 aaKnown RBP2.79□□□□□ -1.96
NEDD8-203ENST00000524927 NDUFA6P56556 154 aa2.79□□□□□ -1.96
NEDD8-203ENST00000524927 JOSD1Q15040 202 aaPredicted RBP2.79□□□□□ -1.96
NEDD8-203ENST00000524927 CENPWQ5EE01 88 aa2.79□□□□□ -1.96
NEDD8-203ENST00000524927 AKR1C8PQ5T2L2 129 aa2.78□□□□□ -1.96
NEDD8-203ENST00000524927 AMELXQ99217 191 aa2.78□□□□□ -1.96
NEDD8-203ENST00000524927 C20orf78Q9BR46 151 aa2.78□□□□□ -1.96
NEDD8-203ENST00000524927 ERG28Q9UKR5 140 aa2.78□□□□□ -1.96
NEDD8-203ENST00000524927 V9GYH0 126 aa2.78□□□□□ -1.96
NEDD8-203ENST00000524927 BORCS7-ASMTA0A0B4J1R7 106 aa2.77□□□□□ -1.97
NEDD8-203ENST00000524927 TRBV10-3A0A0K0K1G6 114 aa2.77□□□□□ -1.97
NEDD8-203ENST00000524927 COMMD7Q86VX2 200 aa2.77□□□□□ -1.97
NEDD8-203ENST00000524927 SMIM20Q8N5G0 67 aa2.77□□□□□ -1.97
NEDD8-203ENST00000524927 BORCS7Q96B45 105 aa2.77□□□□□ -1.97
NEDD8-203ENST00000524927 MAP1LC3B2A6NCE7 125 aa2.76□□□□□ -1.97
NEDD8-203ENST00000524927 ZNF22P17026 224 aaPredicted RBP2.76□□□□□ -1.97
NEDD8-203ENST00000524927 BATFQ16520 125 aa2.76□□□□□ -1.97
NEDD8-203ENST00000524927 C14orf144Q96I85 54 aa2.76□□□□□ -1.97
NEDD8-203ENST00000524927 MAP1LC3BQ9GZQ8 125 aa2.76□□□□□ -1.97
NEDD8-203ENST00000524927 FAM236AA0A1B0GUQ0 79 aa2.75□□□□□ -1.97
NEDD8-203ENST00000524927 FAM236BA0A1B0GV22 79 aa2.75□□□□□ -1.97
NEDD8-203ENST00000524927 MBD3L1Q8WWY6 194 aa2.75□□□□□ -1.97
NEDD8-203ENST00000524927 PPP1R1CQ8WVI7 109 aa2.74□□□□□ -1.97
NEDD8-203ENST00000524927 SMIM2Q9BVW6 85 aa2.74□□□□□ -1.97
NEDD8-203ENST00000524927 M0R143 59 aa2.73□□□□□ -1.97
NEDD8-203ENST00000524927 NCR3O14931 201 aa2.73□□□□□ -1.97
NEDD8-203ENST00000524927 DDTP30046 118 aa2.73□□□□□ -1.97
NEDD8-203ENST00000524927 LYRM1O43325 122 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 NDUFC2O95298 119 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 MPC2O95563 127 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 IL7P13232 177 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 GNG4P50150 75 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 MT1XP80297 61 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 C4orf26Q17RF5 130 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 HSPB8Q9UJY1 196 aa2.72□□□□□ -1.97
NEDD8-203ENST00000524927 LINC00862A6NCI5 91 aa2.71□□□□□ -1.98
NEDD8-203ENST00000524927 J3QR89 54 aa2.71□□□□□ -1.98
NEDD8-203ENST00000524927 RPS28P62857 69 aaKnown RBP2.71□□□□□ -1.98
NEDD8-203ENST00000524927 CCL20P78556 96 aa2.71□□□□□ -1.98
NEDD8-203ENST00000524927 RHEBQ15382 184 aa2.71□□□□□ -1.98
NEDD8-203ENST00000524927 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
NEDD8-203ENST00000524927 A0A1B0GUT8 65 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 D6R8Y8 96 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 J3KT08 172 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 PLA2G10O15496 165 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 OCIAD2Q56VL3 154 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 SCGB1D4Q6XE38 83 aa2.7□□□□□ -1.98
NEDD8-203ENST00000524927 A0A1B0GX51 115 aa2.69□□□□□ -1.98
NEDD8-203ENST00000524927 TMEM218A2RU14 115 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms