RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 APCP25054 2843 aa5.42□□□□□ -1.54
CSMD1-213ENST00000523488 BAHCC1Q9P281 2608 aa5.42□□□□□ -1.54
CSMD1-213ENST00000523488 DHRS4-AS1Q9P1J3 65 aa5.42□□□□□ -1.54
CSMD1-213ENST00000523488 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
CSMD1-213ENST00000523488 MXRA5Q9NR99 2828 aa5.4□□□□□ -1.54
CSMD1-213ENST00000523488 NSD1Q96L73 2696 aaPredicted RBP5.4□□□□□ -1.54
CSMD1-213ENST00000523488 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
CSMD1-213ENST00000523488 TRRAPQ9Y4A5 3859 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 IGLV1-51P01701 117 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 LELP1Q5T871 98 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 COA5Q86WW8 74 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 SPAG11AQ6PDA7 123 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 RPL37AP8A6NKH3 93 aa5.39□□□□□ -1.55
CSMD1-213ENST00000523488 X6R8D5 127 aa5.38□□□□□ -1.55
CSMD1-213ENST00000523488 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
CSMD1-213ENST00000523488 CASC2Q6XLA1 102 aa5.38□□□□□ -1.55
CSMD1-213ENST00000523488 HIVEP1P15822 2718 aa5.37□□□□□ -1.55
CSMD1-213ENST00000523488 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
CSMD1-213ENST00000523488 C7orf33Q8WU49 177 aa5.37□□□□□ -1.55
CSMD1-213ENST00000523488 LINC01558Q9Y6Z2 57 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 CSMD2Q7Z408 3487 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 A0A087WSZ3 146 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 MOBPQ13875 183 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 PCOTHQ58A44 107 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 DYNC2H1Q8NCM8 4307 aaKnown RBP5.36□□□□□ -1.55
CSMD1-213ENST00000523488 IGKV2D-24A0A075B6R9 120 aa5.36□□□□□ -1.55
CSMD1-213ENST00000523488 H3BS24 57 aa5.35□□□□□ -1.55
CSMD1-213ENST00000523488 RPL37AP61513 92 aaKnown RBP5.35□□□□□ -1.55
CSMD1-213ENST00000523488 Q6ZRX8 168 aa5.35□□□□□ -1.55
CSMD1-213ENST00000523488 IGLV7-46A0A075B6I9 117 aa5.34□□□□□ -1.55
CSMD1-213ENST00000523488 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
CSMD1-213ENST00000523488 A0A1W2PNN7 141 aa5.33□□□□□ -1.56
CSMD1-213ENST00000523488 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
CSMD1-213ENST00000523488 H0Y9J4 135 aa5.33□□□□□ -1.56
CSMD1-213ENST00000523488 CMYA5Q8N3K9 4069 aa5.32□□□□□ -1.56
CSMD1-213ENST00000523488 H3BNG1 76 aa5.32□□□□□ -1.56
CSMD1-213ENST00000523488 SPART-AS1P0CW21 52 aa5.32□□□□□ -1.56
CSMD1-213ENST00000523488 SERTAD4-AS1Q5TG53 156 aa5.32□□□□□ -1.56
CSMD1-213ENST00000523488 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
CSMD1-213ENST00000523488 LYSTQ99698 3801 aa5.31□□□□□ -1.56
CSMD1-213ENST00000523488 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
CSMD1-213ENST00000523488 PRKDCP78527 4128 aaKnown RBP5.31□□□□□ -1.56
CSMD1-213ENST00000523488 MDFIQ99750 246 aa5.3□□□□□ -1.56
CSMD1-213ENST00000523488 SPINK7P58062 85 aa5.3□□□□□ -1.56
CSMD1-213ENST00000523488 Q6ZR54 194 aa5.3□□□□□ -1.56
CSMD1-213ENST00000523488 LINC00313P59037 77 aa5.3□□□□□ -1.56
CSMD1-213ENST00000523488 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
CSMD1-213ENST00000523488 KRTAP7-1Q8IUC3 87 aa5.29□□□□□ -1.56
CSMD1-213ENST00000523488 SPRR1BP22528 89 aa5.29□□□□□ -1.56
CSMD1-213ENST00000523488 VPS13DQ5THJ4 4388 aa5.29□□□□□ -1.56
CSMD1-213ENST00000523488 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
CSMD1-213ENST00000523488 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
CSMD1-213ENST00000523488 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
CSMD1-213ENST00000523488 UBE2DNLQ8IWF7 75 aa5.27□□□□□ -1.57
CSMD1-213ENST00000523488 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-213ENST00000523488 KRTAP1-3Q8IUG1 177 aa5.27□□□□□ -1.57
CSMD1-213ENST00000523488 PLA2G1BP04054 148 aaKnown RBP5.26□□□□□ -1.57
CSMD1-213ENST00000523488 FAM168BA1KXE4 195 aa5.25□□□□□ -1.57
CSMD1-213ENST00000523488 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
CSMD1-213ENST00000523488 A0A096LNI7 61 aa5.24□□□□□ -1.57
CSMD1-213ENST00000523488 A8MWP4 228 aa5.24□□□□□ -1.57
CSMD1-213ENST00000523488 Q8NAQ8 132 aa5.24□□□□□ -1.57
CSMD1-213ENST00000523488 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
CSMD1-213ENST00000523488 KMT2BQ9UMN6 2715 aaPredicted RBP5.23□□□□□ -1.57
CSMD1-213ENST00000523488 KRTAP13-3Q3SY46 172 aa5.23□□□□□ -1.57
CSMD1-213ENST00000523488 PRLHP81277 87 aa5.22□□□□□ -1.57
CSMD1-213ENST00000523488 TENM4Q6N022 2769 aa5.21□□□□□ -1.58
CSMD1-213ENST00000523488 RTL8CO15255 209 aa5.21□□□□□ -1.58
CSMD1-213ENST00000523488 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
CSMD1-213ENST00000523488 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
CSMD1-213ENST00000523488 FBN1P35555 2871 aaKnown RBP5.21□□□□□ -1.58
CSMD1-213ENST00000523488 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 TENM2Q9NT68 2774 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 DEFB131BA0A096LNP1 70 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 MMP24-AS1A0A0U1RRL7 71 aa5.2□□□□□ -1.58
CSMD1-213ENST00000523488 HRES1P13985 223 aa5.19□□□□□ -1.58
CSMD1-213ENST00000523488 Q96NJ1 140 aa5.19□□□□□ -1.58
CSMD1-213ENST00000523488 IGKV2-24A0A0C4DH68 120 aa5.18□□□□□ -1.58
CSMD1-213ENST00000523488 RETNLBQ9BQ08 111 aa5.18□□□□□ -1.58
CSMD1-213ENST00000523488 DNAH17Q9UFH2 4485 aa5.18□□□□□ -1.58
CSMD1-213ENST00000523488 FRAS1Q86XX4 4008 aa5.17□□□□□ -1.58
CSMD1-213ENST00000523488 OTOGQ6ZRI0 2925 aa5.17□□□□□ -1.58
CSMD1-213ENST00000523488 KRTAP10-3P60369 221 aa5.17□□□□□ -1.58
CSMD1-213ENST00000523488 DNAH8Q96JB1 4490 aa5.16□□□□□ -1.58
CSMD1-213ENST00000523488 VWFP04275 2813 aa5.16□□□□□ -1.58
CSMD1-213ENST00000523488 TENM1Q9UKZ4 2725 aa5.16□□□□□ -1.58
CSMD1-213ENST00000523488 PDZD2O15018 2839 aa5.16□□□□□ -1.58
CSMD1-213ENST00000523488 LINC01556Q5JQF7 62 aa5.15□□□□□ -1.58
CSMD1-213ENST00000523488 A0A1B0GU69 56 aa5.15□□□□□ -1.59
CSMD1-213ENST00000523488 KRTAP1-1Q07627 177 aa5.15□□□□□ -1.59
CSMD1-213ENST00000523488 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
CSMD1-213ENST00000523488 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
CSMD1-213ENST00000523488 STAB2Q8WWQ8 2551 aa5.13□□□□□ -1.59
CSMD1-213ENST00000523488 ACYP2P14621 99 aa5.13□□□□□ -1.59
CSMD1-213ENST00000523488 SPATA8Q6RVD6 105 aa5.13□□□□□ -1.59
CSMD1-213ENST00000523488 DNAH9Q9NYC9 4486 aa5.12□□□□□ -1.59
CSMD1-213ENST00000523488 DNAH10OSP0CZ25 163 aa5.11□□□□□ -1.59
CSMD1-213ENST00000523488 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms