RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
VEGFA-223ENST00000523125 DLEU1O43261 78 aa6.65□□□□□ -1.34
VEGFA-223ENST00000523125 F8WEM9 126 aa6.64□□□□□ -1.35
VEGFA-223ENST00000523125 IGFL1Q6UW32 110 aa6.64□□□□□ -1.35
VEGFA-223ENST00000523125 TCL1BO95988 128 aa6.63□□□□□ -1.35
VEGFA-223ENST00000523125 OCIAD2Q56VL3 154 aa6.63□□□□□ -1.35
VEGFA-223ENST00000523125 Q6JHZ5 121 aa6.63□□□□□ -1.35
VEGFA-223ENST00000523125 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
VEGFA-223ENST00000523125 CFC1BP0CG36 223 aa6.62□□□□□ -1.35
VEGFA-223ENST00000523125 CFC1P0CG37 223 aa6.62□□□□□ -1.35
VEGFA-223ENST00000523125 BVES-AS1Q5T3Y7 98 aa6.62□□□□□ -1.35
VEGFA-223ENST00000523125 CLEC2BQ92478 149 aa6.62□□□□□ -1.35
VEGFA-223ENST00000523125 C14orf144Q96I85 54 aa6.62□□□□□ -1.35
VEGFA-223ENST00000523125 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
VEGFA-223ENST00000523125 RPL37P61927 97 aaKnown RBP6.61□□□□□ -1.35
VEGFA-223ENST00000523125 PPDPFLQ8WWR9 84 aa6.6□□□□□ -1.35
VEGFA-223ENST00000523125 HIGD1BQ9P298 99 aa6.6□□□□□ -1.35
VEGFA-223ENST00000523125 MT1HP80294 61 aa6.59□□□□□ -1.35
VEGFA-223ENST00000523125 C2orf91Q6ZV80 131 aa6.59□□□□□ -1.35
VEGFA-223ENST00000523125 PAM16Q9Y3D7 125 aa6.59□□□□□ -1.35
VEGFA-223ENST00000523125 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
VEGFA-223ENST00000523125 A0A0B4J2C4 111 aa6.57□□□□□ -1.36
VEGFA-223ENST00000523125 H3BUT2 72 aa6.57□□□□□ -1.36
VEGFA-223ENST00000523125 FAM218AQ96MZ4 157 aa6.57□□□□□ -1.36
VEGFA-223ENST00000523125 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
VEGFA-223ENST00000523125 LCE2DQ5TA82 110 aaPredicted RBP6.56□□□□□ -1.36
VEGFA-223ENST00000523125 RAB37Q96AX2 223 aa6.56□□□□□ -1.36
VEGFA-223ENST00000523125 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
VEGFA-223ENST00000523125 H0YGX0 51 aa6.55□□□□□ -1.36
VEGFA-223ENST00000523125 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
VEGFA-223ENST00000523125 CEND1Q8N111 149 aa6.53□□□□□ -1.36
VEGFA-223ENST00000523125 NDUFV3P56181 108 aaKnown RBP6.52□□□□□ -1.37
VEGFA-223ENST00000523125 Q6Q795 121 aa6.52□□□□□ -1.37
VEGFA-223ENST00000523125 FXYD2P54710 66 aa6.51□□□□□ -1.37
VEGFA-223ENST00000523125 OBSCN-AS1Q96MR7 158 aa6.51□□□□□ -1.37
VEGFA-223ENST00000523125 PRO1854Q9UHT4 67 aa6.51□□□□□ -1.37
VEGFA-223ENST00000523125 LST1O00453 97 aa6.5□□□□□ -1.37
VEGFA-223ENST00000523125 SNCGO76070 127 aa6.5□□□□□ -1.37
VEGFA-223ENST00000523125 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
VEGFA-223ENST00000523125 Q75L30 129 aa6.49□□□□□ -1.37
VEGFA-223ENST00000523125 TEN1Q86WV5 123 aa6.49□□□□□ -1.37
VEGFA-223ENST00000523125 A0A1B0GX51 115 aa6.48□□□□□ -1.37
VEGFA-223ENST00000523125 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
VEGFA-223ENST00000523125 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
VEGFA-223ENST00000523125 A6NJY4 79 aa6.47□□□□□ -1.37
VEGFA-223ENST00000523125 H3BMG7 143 aa6.47□□□□□ -1.37
VEGFA-223ENST00000523125 TRIAP1O43715 76 aa6.47□□□□□ -1.37
VEGFA-223ENST00000523125 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
VEGFA-223ENST00000523125 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
VEGFA-223ENST00000523125 Q96NJ1 140 aa6.46□□□□□ -1.38
VEGFA-223ENST00000523125 SS18L2Q9UHA2 77 aa6.46□□□□□ -1.38
VEGFA-223ENST00000523125 A0A087WSZ3 146 aa6.45□□□□□ -1.38
VEGFA-223ENST00000523125 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
VEGFA-223ENST00000523125 FABP2P12104 132 aa6.44□□□□□ -1.38
VEGFA-223ENST00000523125 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
VEGFA-223ENST00000523125 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
VEGFA-223ENST00000523125 GHRHP01286 108 aa6.43□□□□□ -1.38
VEGFA-223ENST00000523125 HSD52Q0P140 79 aa6.42□□□□□ -1.38
VEGFA-223ENST00000523125 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
VEGFA-223ENST00000523125 A8MUU9 505 aa6.41□□□□□ -1.38
VEGFA-223ENST00000523125 K7ERJ3 54 aa6.41□□□□□ -1.38
VEGFA-223ENST00000523125 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
VEGFA-223ENST00000523125 M0R2T5 61 aa6.4□□□□□ -1.38
VEGFA-223ENST00000523125 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
VEGFA-223ENST00000523125 ORMDL1Q9P0S3 153 aa6.39□□□□□ -1.39
VEGFA-223ENST00000523125 PSMB2P49721 201 aa6.38□□□□□ -1.39
VEGFA-223ENST00000523125 TRBV7-4A0A0J9YYF1 115 aa6.37□□□□□ -1.39
VEGFA-223ENST00000523125 A0A1B0GV72 72 aa6.37□□□□□ -1.39
VEGFA-223ENST00000523125 DNAL4O96015 105 aa6.37□□□□□ -1.39
VEGFA-223ENST00000523125 DSCR10P59022 87 aa6.37□□□□□ -1.39
VEGFA-223ENST00000523125 ANKRD29Q8N6D5 301 aa6.37□□□□□ -1.39
VEGFA-223ENST00000523125 H3BQ85 93 aa6.36□□□□□ -1.39
VEGFA-223ENST00000523125 TMEM256-PLSCR3K7ERE1 68 aa6.35□□□□□ -1.39
VEGFA-223ENST00000523125 COX6CP09669 75 aa6.35□□□□□ -1.39
VEGFA-223ENST00000523125 UQCR10Q9UDW1 63 aa6.35□□□□□ -1.39
VEGFA-223ENST00000523125 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
VEGFA-223ENST00000523125 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
VEGFA-223ENST00000523125 IGKV4-1P06312 121 aa6.33□□□□□ -1.4
VEGFA-223ENST00000523125 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
VEGFA-223ENST00000523125 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
VEGFA-223ENST00000523125 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
VEGFA-223ENST00000523125 CCKP06307 115 aa6.32□□□□□ -1.4
VEGFA-223ENST00000523125 LINC00313P59037 77 aa6.32□□□□□ -1.4
VEGFA-223ENST00000523125 UBE2V1Q13404 147 aa6.32□□□□□ -1.4
VEGFA-223ENST00000523125 DEFB116Q30KQ4 102 aa6.32□□□□□ -1.4
VEGFA-223ENST00000523125 TRACP01848 142 aa6.31□□□□□ -1.4
VEGFA-223ENST00000523125 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
VEGFA-223ENST00000523125 TRBV20-1A0A075B6N2 111 aa6.26□□□□□ -1.41
VEGFA-223ENST00000523125 RBM3P98179 157 aaKnown RBP6.26□□□□□ -1.41
VEGFA-223ENST00000523125 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
VEGFA-223ENST00000523125 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
VEGFA-223ENST00000523125 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
VEGFA-223ENST00000523125 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
VEGFA-223ENST00000523125 MPLKIPQ8TAP9 179 aa6.23□□□□□ -1.41
VEGFA-223ENST00000523125 DSCR8Q96T75 97 aa6.23□□□□□ -1.41
VEGFA-223ENST00000523125 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
VEGFA-223ENST00000523125 HRES1P13985 223 aa6.22□□□□□ -1.41
VEGFA-223ENST00000523125 C9JAW5 83 aa6.2□□□□□ -1.42
VEGFA-223ENST00000523125 C8orf87E5RJ46 101 aa6.2□□□□□ -1.42
VEGFA-223ENST00000523125 Q6ZQT0 140 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms