RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 COX6A2Q02221 97 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 COX17Q14061 63 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 DEFB136Q30KP8 78 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 DEFB114Q30KQ6 69 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 C10orf99Q6UWK7 81 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 LINC00575Q6W349 94 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 SSBP3-AS1Q7Z2R9 100 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 Q8IZM0 81 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 C5orf56Q8N8D9 126 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 DMAC1Q96GE9 116 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 RHPN1-AS1Q9BWJ2 59 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 PRO3102Q9H379 93 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 KCNQ1DNQ9H478 68 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 C6orf48Q9UBA6 75 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 Q9Y3F1 56 aa0.24□□□□□ -2.37
CLK4-213ENST00000523013 GOLGA4Q13439 2230 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 TRIOO75962 3097 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 IGF2RP11717 2491 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 A0A096LNI7 61 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 A0A096LNT2 108 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 NBDYA0A0U1RRE5 68 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 MMP24-AS1A0A0U1RRL7 71 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 LCE6AA0A183 80 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 C10orf142B7Z368 130 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 H3BUA1 57 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 K7EIL1 84 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 LY6G6CO95867 125 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 SPINK1P00995 79 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 POLR2KP53803 58 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 PRLHP81277 87 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 DEFB109BQ30KR1 87 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 SPINK6Q6UWN8 80 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 Q6ZRX8 168 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 PLAC4Q8WY50 150 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 USMG5Q96IX5 58 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 CCL19Q99731 98 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 TP53AIP1Q9HCN2 124 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 NOP10Q9NPE3 64 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 CRIPTQ9P021 101 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 LINC01558Q9Y6Z2 57 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 GOLGB1Q14789 3259 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 SPENQ96T58 3664 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 EP400Q96L91 3159 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 CFAP47Q6ZTR5 3102 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 FRAS1Q86XX4 4008 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 WDFY3Q8IZQ1 3526 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 ANK2Q01484 3957 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 RELNP78509 3460 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 SZT2Q5T011 3432 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 ZFHX3Q15911 3703 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 TPRP12270 2363 aaKnown RBP0.23□□□□□ -2.37
CLK4-213ENST00000523013 PIEZO2Q9H5I5 2752 aa0.23□□□□□ -2.37
CLK4-213ENST00000523013 ABCA12Q86UK0 2595 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 PI4KAP42356 2102 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 WDR87Q6ZQQ6 2873 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 LOC400499M0QZD8 3231 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 COL6A3P12111 3177 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 C5orf42Q9H799 3197 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 IGLV5-48A0A075B6I7 105 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 A0A087WTM6 91 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 DEFB131BA0A096LNP1 70 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 GVQW2A0A096LPI5 108 aaPredicted RBP0.22□□□□□ -2.37
CLK4-213ENST00000523013 H0YAA0 97 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 DEFB4AO15263 64 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 DEFB135Q30KP9 77 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 H1FX-AS1Q4G0G2 97 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 LELP1Q5T871 98 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 UBE2DNLQ8IWF7 75 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 DEFB124Q8NES8 71 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 Q96NJ1 140 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 SPRR4Q96PI1 79 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 MRPL34Q9BQ48 92 aaKnown RBP0.22□□□□□ -2.37
CLK4-213ENST00000523013 PLAC8Q9NZF1 115 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 PRO0255Q9UI72 69 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 APLNQ9ULZ1 77 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 U3KQA8 63 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 PLCE1Q9P212 2302 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 SPEGQ15772 3267 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 PIEZO1Q92508 2521 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 FREM2Q5SZK8 3169 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 NAV2Q8IVL1 2488 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 HTTP42858 3142 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 CFAP54Q96N23 3096 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 XIRP2A4UGR9 3374 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 DMDP11532 3685 aa0.22□□□□□ -2.37
CLK4-213ENST00000523013 SPTBN5Q9NRC6 3674 aaKnown RBP0.22□□□□□ -2.37
CLK4-213ENST00000523013 LAMA3Q16787 3333 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 C2CD3Q4AC94 2353 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 KALRNO60229 2985 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 USP34Q70CQ2 3546 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 TTC28Q96AY4 2481 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 ZFHX4Q86UP3 3567 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 UNC80Q8N2C7 3258 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 A0A0D9SG42 100 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 SPART-AS1P0CW21 52 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 SPRR1AP35321 89 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 LINC01556Q5JQF7 62 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 SPATA8Q6RVD6 105 aa0.21□□□□□ -2.38
CLK4-213ENST00000523013 C10orf95Q9H7T3 257 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms