RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 NMSQ5H8A3 153 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 MRPL54Q6P161 138 aaKnown RBP1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 WFDC10BQ8IUB3 73 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 ORMDL1Q9P0S3 153 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
HMGB1P1-201ENST00000522557 TMEM262E9PQX1 116 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 S100A8P05109 93 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 SFTA3P0C7M3 94 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 IL7P13232 177 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 COX7CP15954 63 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 IQCJQ1A5X6 159 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 LELP1Q5T871 98 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 CYP2G1PQ6ZSU1 146 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 ODF3Q96PU9 254 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 AGPAT4-IT1Q9H0P7 198 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 CDC42SE1Q9NRR8 79 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 TMEM242Q9NWH2 141 aa1.23□□□□□ -2.21
HMGB1P1-201ENST00000522557 PKHD1P08F94 4074 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 A0A087WWC5 75 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 TMEM218A2RU14 115 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 CCL25O15444 150 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 NUPR1O60356 82 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 DNAL4O96015 105 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 NMBP08949 121 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 MT1HL1P0DM35 61 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 IAPPP10997 89 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 Q0VG73 95 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 S100A7L2Q5SY68 101 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 C9orf153Q5TBE3 101 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 C10orf113Q5VZT2 155 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 RPL7L1Q6DKI1 246 aaKnown RBP1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 SVBPQ8N300 66 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 OR10AG1Q8NH19 301 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 LINC01600Q96MT4 127 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 FXYD6Q9H0Q3 95 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 NPVFQ9HCQ7 196 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 PSENENQ9NZ42 101 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 SCP2D1Q9UJQ7 156 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 DNAH5Q8TE73 4624 aa1.22□□□□□ -2.21
HMGB1P1-201ENST00000522557 TRBV6-4A0A1B0GX49 114 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 NDUFB6O95139 128 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 IGKCP01834 107 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 WFDC2Q14508 124 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 RHOHQ15669 191 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 SPANXN1Q5VSR9 72 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 NMES1Q9C002 83 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 Q9H521 79 aa1.21□□□□□ -2.22
HMGB1P1-201ENST00000522557 DNAH2Q9P225 4427 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 APOBP04114 4563 aaKnown RBP1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 H3BQ15 152 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 M0R143 59 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 M0R3E3 92 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 SLC25A6P12236 298 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 PKIAP61925 76 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 SSBP1Q04837 148 aaKnown RBP1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 HSD52Q0P140 79 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 Q6AWC8 147 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 SPINK6Q6UWN8 80 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 SPANXDQ9BXN6 97 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 NDUFA12Q9UI09 145 aa1.2□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRAV23DV6A0A075B6W5 121 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRAV21A0A0B4J279 112 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 RBAKDNA6NC62 111 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 IGLC2P0DOY2 106 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 IFITM1P13164 125 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAUP35544 74 aaKnown RBP1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 S100A10P60903 97 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 NPC2P61916 151 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 CFAP126Q5VTH2 177 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 CSAG1Q6PB30 78 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 PPDPFLQ8WWR9 84 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 TMEM14CQ9P0S9 112 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 C22orf24Q9Y442 160 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 LENEPQ9Y5L5 61 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 PKD1P98161 4303 aa1.19□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAT1Q14517 4588 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 RNF213Q63HN8 5207 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 VPS13BQ7Z7G8 4022 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 A0A087WXM4 84 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 FAM24AA6NFZ4 105 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 JMJD7-PLA2G4BH0Y9G9 81 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 SSSCA1O60232 199 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 SFT2D2O95562 160 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 SPINK8P0C7L1 97 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 UBE2G1P62253 170 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 RBM3P98179 157 aaKnown RBP1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 COX6A2Q02221 97 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 ENHOQ6UWT2 76 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 LINC00299Q6ZSB3 139 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 SPTSSBQ8NFR3 76 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 TSKUQ8WUA8 353 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 TMEM141Q96I45 108 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 PLAC8Q9NZF1 115 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 LINC00474Q9P2X8 69 aa1.18□□□□□ -2.22
HMGB1P1-201ENST00000522557 MYCBP2O75592 4640 aa1.17□□□□□ -2.22
HMGB1P1-201ENST00000522557 TRBV7-3A0A075B6L6 115 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms