RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
CPNE3-205ENST00000522240 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
CPNE3-205ENST00000522240 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
CPNE3-205ENST00000522240 LINC01547P58512 204 aaPredicted RBP7.91□□□□□ -1.14
CPNE3-205ENST00000522240 LINC01600Q96MT4 127 aa7.91□□□□□ -1.14
CPNE3-205ENST00000522240 VPS13BQ7Z7G8 4022 aa7.9□□□□□ -1.14
CPNE3-205ENST00000522240 TMEM256-PLSCR3K7ERE1 68 aa7.9□□□□□ -1.14
CPNE3-205ENST00000522240 SPRR1BP22528 89 aa7.9□□□□□ -1.14
CPNE3-205ENST00000522240 ST20-AS1Q8NBB2 130 aa7.9□□□□□ -1.14
CPNE3-205ENST00000522240 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
CPNE3-205ENST00000522240 TEX49A0A1B0GTD5 131 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 F8W1H4 67 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 BAALC-AS2P0C853 105 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 SPINK6Q6UWN8 80 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 SPRR4Q96PI1 79 aa7.89□□□□□ -1.15
CPNE3-205ENST00000522240 LINC00483Q53H64 154 aa7.88□□□□□ -1.15
CPNE3-205ENST00000522240 Q5VSD8 79 aa7.88□□□□□ -1.15
CPNE3-205ENST00000522240 Q8N377 158 aa7.88□□□□□ -1.15
CPNE3-205ENST00000522240 ANKRD29Q8N6D5 301 aa7.88□□□□□ -1.15
CPNE3-205ENST00000522240 DEFB105AQ8NG35 78 aa7.86□□□□□ -1.15
CPNE3-205ENST00000522240 GAGE2AQ6NT46 116 aa7.85□□□□□ -1.15
CPNE3-205ENST00000522240 FAT1Q14517 4588 aa7.84□□□□□ -1.15
CPNE3-205ENST00000522240 KRTAP23-1A1A580 65 aa7.83□□□□□ -1.16
CPNE3-205ENST00000522240 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
CPNE3-205ENST00000522240 FAM229BQ4G0N7 80 aa7.82□□□□□ -1.16
CPNE3-205ENST00000522240 SMIM29Q86T20 159 aa7.82□□□□□ -1.16
CPNE3-205ENST00000522240 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
CPNE3-205ENST00000522240 FLG2Q5D862 2391 aaPredicted RBP7.81□□□□□ -1.16
CPNE3-205ENST00000522240 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
CPNE3-205ENST00000522240 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 PKHD1L1Q86WI1 4243 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 F8WEM9 126 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 KRTAP1-4P0C5Y4 121 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 XP32Q5T750 250 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 C3orf22Q8N5N4 141 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 OBSCN-AS1Q96MR7 158 aa7.8□□□□□ -1.16
CPNE3-205ENST00000522240 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
CPNE3-205ENST00000522240 ETDBQ3ZM63 59 aa7.77□□□□□ -1.17
CPNE3-205ENST00000522240 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
CPNE3-205ENST00000522240 Q8NBF4 154 aa7.76□□□□□ -1.17
CPNE3-205ENST00000522240 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
CPNE3-205ENST00000522240 CRYGAP11844 174 aa7.75□□□□□ -1.17
CPNE3-205ENST00000522240 A0A087X002 238 aa7.74□□□□□ -1.17
CPNE3-205ENST00000522240 IGLV9-49A0A0B4J1Y8 123 aa7.74□□□□□ -1.17
CPNE3-205ENST00000522240 TRBV7-4A0A0J9YYF1 115 aa7.74□□□□□ -1.17
CPNE3-205ENST00000522240 Q6JHZ5 121 aa7.74□□□□□ -1.17
CPNE3-205ENST00000522240 LOC110117498A0A087WWA1 95 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 A0A1B0GV72 72 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 PDE6GP18545 87 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 KRTAP19-4Q3LI73 84 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 C9orf153Q5TBE3 101 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
CPNE3-205ENST00000522240 MOBPQ13875 183 aa7.72□□□□□ -1.17
CPNE3-205ENST00000522240 C14orf132Q9NPU4 83 aa7.72□□□□□ -1.17
CPNE3-205ENST00000522240 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
CPNE3-205ENST00000522240 KRTAP13-2Q52LG2 175 aa7.71□□□□□ -1.18
CPNE3-205ENST00000522240 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
CPNE3-205ENST00000522240 IGFL1Q6UW32 110 aa7.7□□□□□ -1.18
CPNE3-205ENST00000522240 Q6ZQT0 140 aa7.7□□□□□ -1.18
CPNE3-205ENST00000522240 PRR26Q8N8Z3 221 aa7.67□□□□□ -1.18
CPNE3-205ENST00000522240 TYMSOSQ8TAI1 123 aa7.67□□□□□ -1.18
CPNE3-205ENST00000522240 CCKP06307 115 aa7.66□□□□□ -1.18
CPNE3-205ENST00000522240 Q6Q795 121 aa7.66□□□□□ -1.18
CPNE3-205ENST00000522240 A0A1B0GW54 56 aa7.64□□□□□ -1.19
CPNE3-205ENST00000522240 A0A1W2PNM2 257 aa7.64□□□□□ -1.19
CPNE3-205ENST00000522240 CD164Q04900 197 aa7.64□□□□□ -1.19
CPNE3-205ENST00000522240 J3QR89 54 aa7.63□□□□□ -1.19
CPNE3-205ENST00000522240 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
CPNE3-205ENST00000522240 VPS25Q9BRG1 176 aa7.62□□□□□ -1.19
CPNE3-205ENST00000522240 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
CPNE3-205ENST00000522240 FAM240AA0A1B0GVK7 77 aa7.61□□□□□ -1.19
CPNE3-205ENST00000522240 OXTP01178 125 aa7.61□□□□□ -1.19
CPNE3-205ENST00000522240 KRTAP4-6Q9BYQ5 205 aa7.61□□□□□ -1.19
CPNE3-205ENST00000522240 KRTAP10-8P60410 259 aa7.6□□□□□ -1.19
CPNE3-205ENST00000522240 TRBV7-7A0A0K0K1E9 115 aa7.59□□□□□ -1.19
CPNE3-205ENST00000522240 KRTAP29-1A8MX34 341 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-205ENST00000522240 K7ERU9 68 aa7.59□□□□□ -1.19
CPNE3-205ENST00000522240 ACYP1P07311 99 aa7.59□□□□□ -1.19
CPNE3-205ENST00000522240 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
CPNE3-205ENST00000522240 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
CPNE3-205ENST00000522240 PCP4P48539 62 aa7.58□□□□□ -1.2
CPNE3-205ENST00000522240 RPS29P62273 56 aaKnown RBP7.57□□□□□ -1.2
CPNE3-205ENST00000522240 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
CPNE3-205ENST00000522240 A0A087WSZ3 146 aa7.56□□□□□ -1.2
CPNE3-205ENST00000522240 SPINK1P00995 79 aa7.56□□□□□ -1.2
CPNE3-205ENST00000522240 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
CPNE3-205ENST00000522240 MT1HL1P0DM35 61 aa7.55□□□□□ -1.2
CPNE3-205ENST00000522240 Q5XG85 94 aa7.55□□□□□ -1.2
CPNE3-205ENST00000522240 HRCT1Q6UXD1 115 aa7.55□□□□□ -1.2
CPNE3-205ENST00000522240 LIMD2Q9BT23 127 aa7.54□□□□□ -1.2
CPNE3-205ENST00000522240 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
CPNE3-205ENST00000522240 LINC00846Q9NV44 126 aa7.53□□□□□ -1.2
CPNE3-205ENST00000522240 TNXBP22105 4242 aa7.53□□□□□ -1.2
CPNE3-205ENST00000522240 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
CPNE3-205ENST00000522240 ASB16-AS1Q495Z4 193 aa7.52□□□□□ -1.21
CPNE3-205ENST00000522240 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
CPNE3-205ENST00000522240 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
CPNE3-205ENST00000522240 NREPQ16612 68 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms