RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 KRTAP13-1Q8IUC0 172 aa11.42□□□□□ -0.58
TRAPPC9-210ENST00000521667 HAMPP81172 84 aa11.4□□□□□ -0.59
TRAPPC9-210ENST00000521667 A0A1W2PNM2 257 aa11.39□□□□□ -0.59
TRAPPC9-210ENST00000521667 DNAH11Q96DT5 4516 aa11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 SPRR1BP22528 89 aa11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 HIST1H4AP62805 103 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 A0A087WVE0 104 aa11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 A0A1B0GW54 56 aa11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 FAT2Q9NYQ8 4349 aa11.38□□□□□ -0.59
TRAPPC9-210ENST00000521667 Q8NBF4 154 aa11.37□□□□□ -0.59
TRAPPC9-210ENST00000521667 CXCL6P80162 114 aa11.36□□□□□ -0.59
TRAPPC9-210ENST00000521667 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
TRAPPC9-210ENST00000521667 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
TRAPPC9-210ENST00000521667 SS18L2Q9UHA2 77 aa11.35□□□□□ -0.59
TRAPPC9-210ENST00000521667 NREPQ16612 68 aa11.34□□□□□ -0.59
TRAPPC9-210ENST00000521667 PSORS1C2Q9UIG4 136 aa11.34□□□□□ -0.59
TRAPPC9-210ENST00000521667 SPRR4Q96PI1 79 aa11.33□□□□□ -0.6
TRAPPC9-210ENST00000521667 LCE6AA0A183 80 aa11.33□□□□□ -0.6
TRAPPC9-210ENST00000521667 IGFL1Q6UW32 110 aa11.32□□□□□ -0.6
TRAPPC9-210ENST00000521667 PKD1P98161 4303 aa11.32□□□□□ -0.6
TRAPPC9-210ENST00000521667 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
TRAPPC9-210ENST00000521667 CRYGAP11844 174 aa11.29□□□□□ -0.6
TRAPPC9-210ENST00000521667 SCXQ7RTU7 201 aa11.29□□□□□ -0.6
TRAPPC9-210ENST00000521667 KMT2CQ8NEZ4 4911 aaKnown RBP11.29□□□□□ -0.6
TRAPPC9-210ENST00000521667 A0A0G2JQZ4 141 aa11.28□□□□□ -0.6
TRAPPC9-210ENST00000521667 ATOX1O00244 68 aa11.28□□□□□ -0.6
TRAPPC9-210ENST00000521667 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
TRAPPC9-210ENST00000521667 RYR2Q92736 4967 aa11.26□□□□□ -0.61
TRAPPC9-210ENST00000521667 BPY2O14599 106 aa11.25□□□□□ -0.61
TRAPPC9-210ENST00000521667 ZNF861PO60384 105 aa11.25□□□□□ -0.61
TRAPPC9-210ENST00000521667 CIRBP-AS1Q8TBR5 109 aa11.25□□□□□ -0.61
TRAPPC9-210ENST00000521667 DNAH8Q96JB1 4490 aa11.24□□□□□ -0.61
TRAPPC9-210ENST00000521667 UQCRQO14949 82 aa11.24□□□□□ -0.61
TRAPPC9-210ENST00000521667 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-210ENST00000521667 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-210ENST00000521667 KRTAP10-1P60331 282 aa11.22□□□□□ -0.61
TRAPPC9-210ENST00000521667 LINC00483Q53H64 154 aa11.22□□□□□ -0.61
TRAPPC9-210ENST00000521667 Q6ZSA8 131 aa11.22□□□□□ -0.61
TRAPPC9-210ENST00000521667 IGLV7-43P04211 117 aa11.19□□□□□ -0.62
TRAPPC9-210ENST00000521667 COX7CP15954 63 aa11.19□□□□□ -0.62
TRAPPC9-210ENST00000521667 C9orf153Q5TBE3 101 aa11.18□□□□□ -0.62
TRAPPC9-210ENST00000521667 A0A087WSZ3 146 aa11.18□□□□□ -0.62
TRAPPC9-210ENST00000521667 Q8N9L7 120 aa11.18□□□□□ -0.62
TRAPPC9-210ENST00000521667 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
TRAPPC9-210ENST00000521667 IGLV9-49A0A0B4J1Y8 123 aa11.16□□□□□ -0.62
TRAPPC9-210ENST00000521667 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
TRAPPC9-210ENST00000521667 RPL37AP61513 92 aaKnown RBP11.12□□□□□ -0.63
TRAPPC9-210ENST00000521667 PKHD1P08F94 4074 aa11.11□□□□□ -0.63
TRAPPC9-210ENST00000521667 DSCR10P59022 87 aa11.1□□□□□ -0.63
TRAPPC9-210ENST00000521667 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
TRAPPC9-210ENST00000521667 LINC00336Q6ZUF6 198 aa11.09□□□□□ -0.63
TRAPPC9-210ENST00000521667 SMIM20Q8N5G0 67 aa11.08□□□□□ -0.64
TRAPPC9-210ENST00000521667 RYR3Q15413 4870 aa11.07□□□□□ -0.64
TRAPPC9-210ENST00000521667 MOBPQ13875 183 aa11.06□□□□□ -0.64
TRAPPC9-210ENST00000521667 DEFB116Q30KQ4 102 aa11.05□□□□□ -0.64
TRAPPC9-210ENST00000521667 K7EQZ3 153 aa11.04□□□□□ -0.64
TRAPPC9-210ENST00000521667 TRAV7A0A075B6U4 112 aa11.03□□□□□ -0.64
TRAPPC9-210ENST00000521667 A0A1B0GVY2 172 aa11.02□□□□□ -0.64
TRAPPC9-210ENST00000521667 LRP1BQ9NZR2 4599 aa11.02□□□□□ -0.64
TRAPPC9-210ENST00000521667 DYNC1H1Q14204 4646 aaKnown RBP11.02□□□□□ -0.65
TRAPPC9-210ENST00000521667 LINC00472Q9H8W2 130 aa11.01□□□□□ -0.65
TRAPPC9-210ENST00000521667 HRCT1Q6UXD1 115 aa10.99□□□□□ -0.65
TRAPPC9-210ENST00000521667 CYSTM1Q9H1C7 97 aa10.96□□□□□ -0.66
TRAPPC9-210ENST00000521667 J3KT08 172 aa10.94□□□□□ -0.66
TRAPPC9-210ENST00000521667 TMEM258P61165 79 aa10.94□□□□□ -0.66
TRAPPC9-210ENST00000521667 A8MWP4 228 aa10.93□□□□□ -0.66
TRAPPC9-210ENST00000521667 HCG22E2RYF7 251 aa10.93□□□□□ -0.66
TRAPPC9-210ENST00000521667 OCR1Q9BZK8 76 aa10.92□□□□□ -0.66
TRAPPC9-210ENST00000521667 SSBP3-AS1Q7Z2R9 100 aa10.92□□□□□ -0.66
TRAPPC9-210ENST00000521667 PRR15Q8IV56 129 aa10.91□□□□□ -0.66
TRAPPC9-210ENST00000521667 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
TRAPPC9-210ENST00000521667 Q96NJ1 140 aa10.91□□□□□ -0.66
TRAPPC9-210ENST00000521667 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-210ENST00000521667 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
TRAPPC9-210ENST00000521667 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-210ENST00000521667 A0A087X002 238 aa10.87□□□□□ -0.67
TRAPPC9-210ENST00000521667 CD164Q04900 197 aa10.87□□□□□ -0.67
TRAPPC9-210ENST00000521667 WFDC13Q8IUB5 93 aa10.85□□□□□ -0.67
TRAPPC9-210ENST00000521667 NDUFB1O75438 58 aa10.85□□□□□ -0.67
TRAPPC9-210ENST00000521667 KRTAP13-2Q52LG2 175 aa10.85□□□□□ -0.67
TRAPPC9-210ENST00000521667 KRTAP1-4P0C5Y4 121 aa10.84□□□□□ -0.67
TRAPPC9-210ENST00000521667 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
TRAPPC9-210ENST00000521667 KLKP1Q107X0 134 aa10.83□□□□□ -0.68
TRAPPC9-210ENST00000521667 KRTAP29-1A8MX34 341 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC9-210ENST00000521667 CASC2Q6XLA1 102 aa10.81□□□□□ -0.68
TRAPPC9-210ENST00000521667 TMEM254Q8TBM7 123 aa10.8□□□□□ -0.68
TRAPPC9-210ENST00000521667 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
TRAPPC9-210ENST00000521667 SMR3BP02814 79 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC9-210ENST00000521667 SPINK6Q6UWN8 80 aa10.79□□□□□ -0.68
TRAPPC9-210ENST00000521667 MMP24-AS1A0A0U1RRL7 71 aa10.78□□□□□ -0.68
TRAPPC9-210ENST00000521667 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
TRAPPC9-210ENST00000521667 PLA2G1BP04054 148 aaKnown RBP10.76□□□□□ -0.69
TRAPPC9-210ENST00000521667 A0A1B0GVX0 72 aa10.75□□□□□ -0.69
TRAPPC9-210ENST00000521667 ASB16-AS1Q495Z4 193 aa10.75□□□□□ -0.69
TRAPPC9-210ENST00000521667 FAT1Q14517 4588 aa10.74□□□□□ -0.69
TRAPPC9-210ENST00000521667 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
TRAPPC9-210ENST00000521667 H7BZZ5 65 aa10.73□□□□□ -0.69
TRAPPC9-210ENST00000521667 IGHV6-1A0A0B4J1U7 121 aa10.72□□□□□ -0.69
TRAPPC9-210ENST00000521667 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
TRAPPC9-210ENST00000521667 C8orf17Q9NRJ1 99 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms