RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 UBE2BP63146 152 aa4.2□□□□□ -1.74
CTNNA1-228ENST00000521640 IGKV2-24A0A0C4DH68 120 aa4.19□□□□□ -1.74
CTNNA1-228ENST00000521640 FUSP35637 526 aaKnown RBP eCLIP4.19□□□□□ -1.74
CTNNA1-228ENST00000521640 SPACA4Q8TDM5 124 aa4.19□□□□□ -1.74
CTNNA1-228ENST00000521640 SPRR4Q96PI1 79 aa4.19□□□□□ -1.74
CTNNA1-228ENST00000521640 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
CTNNA1-228ENST00000521640 F8WEM9 126 aa4.18□□□□□ -1.74
CTNNA1-228ENST00000521640 FAM19A1Q7Z5A9 133 aa4.18□□□□□ -1.74
CTNNA1-228ENST00000521640 Q8NBF4 154 aa4.18□□□□□ -1.74
CTNNA1-228ENST00000521640 M0R2N4 97 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 UQCRQO14949 82 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 C1orf137Q5JT78 98 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 C1orf134Q5TEV5 83 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 SMIM29Q86T20 159 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 SMIM20Q8N5G0 67 aa4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CTNNA1-228ENST00000521640 ERC2-IT1O76042 136 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 CHTF8P0CG12 524 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 CRYGAP11844 174 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 COX7CP15954 63 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 PHF5AQ7RTV0 110 aaKnown RBP4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 KRTAP13-1Q8IUC0 172 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 DEFB105AQ8NG35 78 aa4.16□□□□□ -1.74
CTNNA1-228ENST00000521640 C3orf84H3BNL1 204 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 RTL8CO15255 209 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 RPL37AP61513 92 aaKnown RBP4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 HAMPP81172 84 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 NREPQ16612 68 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 C3orf22Q8N5N4 141 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 PLAC8Q9NZF1 115 aa4.15□□□□□ -1.75
CTNNA1-228ENST00000521640 VPS13DQ5THJ4 4388 aa4.14□□□□□ -1.75
CTNNA1-228ENST00000521640 A0A1W2PNM2 257 aa4.14□□□□□ -1.75
CTNNA1-228ENST00000521640 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
CTNNA1-228ENST00000521640 UBE2AP49459 152 aa4.14□□□□□ -1.75
CTNNA1-228ENST00000521640 PRLHP81277 87 aa4.14□□□□□ -1.75
CTNNA1-228ENST00000521640 A0A087WVE0 104 aa4.13□□□□□ -1.75
CTNNA1-228ENST00000521640 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
CTNNA1-228ENST00000521640 HIGD2AQ9BW72 106 aa4.13□□□□□ -1.75
CTNNA1-228ENST00000521640 ZNF706Q9Y5V0 76 aaPredicted RBP4.13□□□□□ -1.75
CTNNA1-228ENST00000521640 DNAH7Q8WXX0 4024 aa4.13□□□□□ -1.75
CTNNA1-228ENST00000521640 MEGF8Q7Z7M0 2845 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 IGLV5-52A0A0A0MRZ9 124 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 PANO1I0J062 215 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 BPY2O14599 106 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 KRTAP11-1Q8IUC1 163 aa4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
CTNNA1-228ENST00000521640 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 C9orf153Q5TBE3 101 aa4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 IGFL1Q6UW32 110 aa4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
CTNNA1-228ENST00000521640 LY6G6CO95867 125 aa4.1□□□□□ -1.75
CTNNA1-228ENST00000521640 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
CTNNA1-228ENST00000521640 STARD9Q9P2P6 4700 aa4.1□□□□□ -1.75
CTNNA1-228ENST00000521640 DPH3Q96FX2 82 aa4.09□□□□□ -1.75
CTNNA1-228ENST00000521640 DNAH6Q9C0G6 4158 aa4.09□□□□□ -1.75
CTNNA1-228ENST00000521640 ZNF861PO60384 105 aa4.08□□□□□ -1.76
CTNNA1-228ENST00000521640 Q6ZSA8 131 aa4.08□□□□□ -1.76
CTNNA1-228ENST00000521640 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
CTNNA1-228ENST00000521640 J3KT08 172 aa4.07□□□□□ -1.76
CTNNA1-228ENST00000521640 MPLKIPQ8TAP9 179 aa4.07□□□□□ -1.76
CTNNA1-228ENST00000521640 PSORS1C2Q9UIG4 136 aa4.07□□□□□ -1.76
CTNNA1-228ENST00000521640 DNAH10Q8IVF4 4471 aa4.07□□□□□ -1.76
CTNNA1-228ENST00000521640 FBN3Q75N90 2809 aa4.07□□□□□ -1.76
CTNNA1-228ENST00000521640 TMEM258P61165 79 aa4.06□□□□□ -1.76
CTNNA1-228ENST00000521640 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 A0A087WSZ3 146 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 NDUFC1O43677 76 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 IGLV7-43P04211 117 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 DSCR10P59022 87 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 KLKP1Q107X0 134 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 SCXQ7RTU7 201 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 SS18L2Q9UHA2 77 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 ALMS1Q8TCU4 4167 aa4.05□□□□□ -1.76
CTNNA1-228ENST00000521640 LYSTQ99698 3801 aa4.04□□□□□ -1.76
CTNNA1-228ENST00000521640 OCR1Q9BZK8 76 aa4.04□□□□□ -1.76
CTNNA1-228ENST00000521640 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
CTNNA1-228ENST00000521640 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-228ENST00000521640 CD164Q04900 197 aa4.03□□□□□ -1.76
CTNNA1-228ENST00000521640 LINC00472Q9H8W2 130 aa4.03□□□□□ -1.76
CTNNA1-228ENST00000521640 LCE6AA0A183 80 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 A8MWP4 228 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 HCG22E2RYF7 251 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 LINC00336Q6ZUF6 198 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 Q8N9L7 120 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 CIRBP-AS1Q8TBR5 109 aa4.02□□□□□ -1.77
CTNNA1-228ENST00000521640 K7EQZ3 153 aa4.01□□□□□ -1.77
CTNNA1-228ENST00000521640 FAM229BQ4G0N7 80 aa4.01□□□□□ -1.77
CTNNA1-228ENST00000521640 Q75L30 129 aa4.01□□□□□ -1.77
CTNNA1-228ENST00000521640 SSBP3-AS1Q7Z2R9 100 aa4.01□□□□□ -1.77
CTNNA1-228ENST00000521640 C20orf197Q8N268 126 aa4.01□□□□□ -1.77
CTNNA1-228ENST00000521640 KRTAP29-1A8MX34 341 aaPredicted RBP4□□□□□ -1.77
CTNNA1-228ENST00000521640 ATP5EP56381 51 aaPredicted RBP4□□□□□ -1.77
CTNNA1-228ENST00000521640 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
CTNNA1-228ENST00000521640 PRR15Q8IV56 129 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms