RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TRAV23DV6A0A075B6W5 121 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 J3QR89 54 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 K7ERJ3 54 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 NDUFC2O95298 119 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 TSPEAR-AS2P59090 65 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
PRKDC-204ENST00000521331 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
PRKDC-204ENST00000521331 J3QQQ9 107 aa8.15□□□□□ -1.1
PRKDC-204ENST00000521331 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
PRKDC-204ENST00000521331 LIMD2Q9BT23 127 aa8.15□□□□□ -1.1
PRKDC-204ENST00000521331 H3BMG7 143 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 HERVK_113P61574 105 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 LYRM7Q5U5X0 104 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 ST20-AS1Q8NBB2 130 aa8.14□□□□□ -1.11
PRKDC-204ENST00000521331 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
PRKDC-204ENST00000521331 SIGMAR1Q99720 223 aa8.13□□□□□ -1.11
PRKDC-204ENST00000521331 ZNF815PA8K554 130 aa8.12□□□□□ -1.11
PRKDC-204ENST00000521331 MT1HP80294 61 aa8.12□□□□□ -1.11
PRKDC-204ENST00000521331 PCOTHQ58A44 107 aa8.12□□□□□ -1.11
PRKDC-204ENST00000521331 IGLV8-61A0A075B6I0 122 aa8.11□□□□□ -1.11
PRKDC-204ENST00000521331 TRBV20-1A0A075B6N2 111 aa8.11□□□□□ -1.11
PRKDC-204ENST00000521331 SPRR1BP22528 89 aa8.1□□□□□ -1.11
PRKDC-204ENST00000521331 SOSTDC1Q6X4U4 206 aa8.09□□□□□ -1.11
PRKDC-204ENST00000521331 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 NPC2P61916 151 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 ETDBQ3ZM63 59 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 LAMTOR3Q9UHA4 124 aa8.08□□□□□ -1.12
PRKDC-204ENST00000521331 A0A0B4J2C4 111 aa8.07□□□□□ -1.12
PRKDC-204ENST00000521331 A0A0J9YXY3 114 aa8.06□□□□□ -1.12
PRKDC-204ENST00000521331 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
PRKDC-204ENST00000521331 CFC1P0CG37 223 aa8.06□□□□□ -1.12
PRKDC-204ENST00000521331 ADAMTSL4-AS1Q5T5F5 129 aa8.06□□□□□ -1.12
PRKDC-204ENST00000521331 SCGB1D4Q6XE38 83 aa8.06□□□□□ -1.12
PRKDC-204ENST00000521331 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
PRKDC-204ENST00000521331 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
PRKDC-204ENST00000521331 PRO1854Q9UHT4 67 aa8.05□□□□□ -1.12
PRKDC-204ENST00000521331 CD164Q04900 197 aa8.04□□□□□ -1.12
PRKDC-204ENST00000521331 SPANXCQ9NY87 97 aa8.04□□□□□ -1.12
PRKDC-204ENST00000521331 OR13C6PQ8NH95 151 aa8.03□□□□□ -1.12
PRKDC-204ENST00000521331 TCL1BO95988 128 aa8.01□□□□□ -1.13
PRKDC-204ENST00000521331 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
PRKDC-204ENST00000521331 MTURNQ8N3F0 131 aa8.01□□□□□ -1.13
PRKDC-204ENST00000521331 LINC00308Q8TCZ7 52 aa8.01□□□□□ -1.13
PRKDC-204ENST00000521331 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
PRKDC-204ENST00000521331 A0A1B0GV72 72 aa8□□□□□ -1.13
PRKDC-204ENST00000521331 TIMM17BO60830 172 aa8□□□□□ -1.13
PRKDC-204ENST00000521331 ELOF1P60002 83 aaKnown RBP8□□□□□ -1.13
PRKDC-204ENST00000521331 Q5XG85 94 aa8□□□□□ -1.13
PRKDC-204ENST00000521331 LITAFQ99732 161 aa8□□□□□ -1.13
PRKDC-204ENST00000521331 H7C2G1 150 aa7.99□□□□□ -1.13
PRKDC-204ENST00000521331 COX7BP24311 80 aa7.99□□□□□ -1.13
PRKDC-204ENST00000521331 PSMB2P49721 201 aa7.99□□□□□ -1.13
PRKDC-204ENST00000521331 A4D1N5 150 aa7.98□□□□□ -1.13
PRKDC-204ENST00000521331 M0R2T5 61 aa7.98□□□□□ -1.13
PRKDC-204ENST00000521331 Q1RN00 199 aa7.98□□□□□ -1.13
PRKDC-204ENST00000521331 TEX49A0A1B0GTD5 131 aa7.97□□□□□ -1.13
PRKDC-204ENST00000521331 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
PRKDC-204ENST00000521331 C6orf99Q4VX62 202 aa7.96□□□□□ -1.14
PRKDC-204ENST00000521331 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
PRKDC-204ENST00000521331 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
PRKDC-204ENST00000521331 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
PRKDC-204ENST00000521331 MUSTN1Q8IVN3 82 aa7.95□□□□□ -1.14
PRKDC-204ENST00000521331 IFITM1P13164 125 aa7.94□□□□□ -1.14
PRKDC-204ENST00000521331 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
PRKDC-204ENST00000521331 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
PRKDC-204ENST00000521331 TRBV7-6A0A0J9YX20 115 aa7.93□□□□□ -1.14
PRKDC-204ENST00000521331 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
PRKDC-204ENST00000521331 Q6Q795 121 aa7.92□□□□□ -1.14
PRKDC-204ENST00000521331 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
PRKDC-204ENST00000521331 H3BT86 120 aa7.91□□□□□ -1.14
PRKDC-204ENST00000521331 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
PRKDC-204ENST00000521331 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
PRKDC-204ENST00000521331 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
PRKDC-204ENST00000521331 C9JAW5 83 aa7.89□□□□□ -1.15
PRKDC-204ENST00000521331 TRIAP1O43715 76 aa7.88□□□□□ -1.15
PRKDC-204ENST00000521331 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
PRKDC-204ENST00000521331 LST1O00453 97 aa7.87□□□□□ -1.15
PRKDC-204ENST00000521331 COPS9Q8WXC6 57 aa7.87□□□□□ -1.15
PRKDC-204ENST00000521331 A0A0G2JQZ4 141 aa7.86□□□□□ -1.15
PRKDC-204ENST00000521331 COX6CP09669 75 aa7.85□□□□□ -1.15
PRKDC-204ENST00000521331 F8WEM9 126 aa7.8□□□□□ -1.16
PRKDC-204ENST00000521331 ACYP1P07311 99 aa7.8□□□□□ -1.16
PRKDC-204ENST00000521331 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
PRKDC-204ENST00000521331 TRBV7-7A0A0K0K1E9 115 aa7.78□□□□□ -1.16
PRKDC-204ENST00000521331 SNCGO76070 127 aa7.78□□□□□ -1.16
PRKDC-204ENST00000521331 TRACP01848 142 aa7.78□□□□□ -1.16
PRKDC-204ENST00000521331 NDUFV3P56181 108 aaKnown RBP7.77□□□□□ -1.17
PRKDC-204ENST00000521331 ATP11AUNQ6ZP68 121 aa7.77□□□□□ -1.17
PRKDC-204ENST00000521331 IMUPQ9GZP8 106 aa7.77□□□□□ -1.17
PRKDC-204ENST00000521331 Q6JHZ5 121 aa7.76□□□□□ -1.17
PRKDC-204ENST00000521331 SMIM11BQ8TCY0 68 aa7.76□□□□□ -1.17
PRKDC-204ENST00000521331 ANAPC13Q9BS18 74 aa7.76□□□□□ -1.17
PRKDC-204ENST00000521331 Q75L30 129 aa7.75□□□□□ -1.17
PRKDC-204ENST00000521331 CLEC2BQ92478 149 aa7.74□□□□□ -1.17
PRKDC-204ENST00000521331 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms