RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TEX49A0A1B0GTD5 131 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 ACYP1P07311 99 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 FAM19A1Q7Z5A9 133 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 CIRBP-AS1Q8TBR5 109 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 VPS25Q9BRG1 176 aa5.31□□□□□ -1.56
VAPB-206ENST00000520497 UBE2AP49459 152 aa5.3□□□□□ -1.56
VAPB-206ENST00000520497 FAM240AA0A1B0GVK7 77 aa5.29□□□□□ -1.56
VAPB-206ENST00000520497 H0Y9J4 135 aa5.29□□□□□ -1.56
VAPB-206ENST00000520497 PDE6GP18545 87 aa5.29□□□□□ -1.56
VAPB-206ENST00000520497 BCE1O60756 84 aa5.28□□□□□ -1.56
VAPB-206ENST00000520497 RBM3P98179 157 aaKnown RBP5.28□□□□□ -1.56
VAPB-206ENST00000520497 DSCR8Q96T75 97 aa5.28□□□□□ -1.56
VAPB-206ENST00000520497 F8WEM9 126 aa5.27□□□□□ -1.57
VAPB-206ENST00000520497 HAMPP81172 84 aa5.27□□□□□ -1.57
VAPB-206ENST00000520497 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
VAPB-206ENST00000520497 HIGD2AQ9BW72 106 aa5.27□□□□□ -1.57
VAPB-206ENST00000520497 APOBP04114 4563 aaKnown RBP5.26□□□□□ -1.57
VAPB-206ENST00000520497 XGP55808 180 aa5.26□□□□□ -1.57
VAPB-206ENST00000520497 NDUFV3P56181 108 aaKnown RBP5.26□□□□□ -1.57
VAPB-206ENST00000520497 GAGE2AQ6NT46 116 aa5.26□□□□□ -1.57
VAPB-206ENST00000520497 Q9BRP9 147 aa5.26□□□□□ -1.57
VAPB-206ENST00000520497 C14orf132Q9NPU4 83 aa5.26□□□□□ -1.57
VAPB-206ENST00000520497 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
VAPB-206ENST00000520497 ZNF706Q9Y5V0 76 aaPredicted RBP5.26□□□□□ -1.57
VAPB-206ENST00000520497 PRLHP81277 87 aa5.25□□□□□ -1.57
VAPB-206ENST00000520497 KRTAP13-1Q8IUC0 172 aa5.25□□□□□ -1.57
VAPB-206ENST00000520497 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
VAPB-206ENST00000520497 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
VAPB-206ENST00000520497 IGLV5-48A0A075B6I7 105 aa5.24□□□□□ -1.57
VAPB-206ENST00000520497 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
VAPB-206ENST00000520497 CCKP06307 115 aa5.24□□□□□ -1.57
VAPB-206ENST00000520497 SMCR5Q8TEV8 140 aa5.24□□□□□ -1.57
VAPB-206ENST00000520497 SRRM2Q9UQ35 2752 aaKnown RBP5.24□□□□□ -1.57
VAPB-206ENST00000520497 A0A1B0GV72 72 aa5.23□□□□□ -1.57
VAPB-206ENST00000520497 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
VAPB-206ENST00000520497 Q8N377 158 aa5.22□□□□□ -1.57
VAPB-206ENST00000520497 A0A1B0GW54 56 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 CDK2AP2O75956 126 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 ERC2-IT1O76042 136 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 IGLV7-43P04211 117 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 Q6ZQT0 140 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 ST20-AS1Q8NBB2 130 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
VAPB-206ENST00000520497 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
VAPB-206ENST00000520497 ZNF861PO60384 105 aa5.19□□□□□ -1.58
VAPB-206ENST00000520497 SPRR1BP22528 89 aa5.19□□□□□ -1.58
VAPB-206ENST00000520497 LINC01547P58512 204 aaPredicted RBP5.19□□□□□ -1.58
VAPB-206ENST00000520497 UBL5Q9BZL1 73 aa5.19□□□□□ -1.58
VAPB-206ENST00000520497 Q6JHZ5 121 aa5.18□□□□□ -1.58
VAPB-206ENST00000520497 LINC00643Q86TS7 51 aa5.18□□□□□ -1.58
VAPB-206ENST00000520497 Q8N1X5 172 aa5.18□□□□□ -1.58
VAPB-206ENST00000520497 KRTAP10-4P60372 401 aaPredicted RBP5.17□□□□□ -1.58
VAPB-206ENST00000520497 CDIP1Q9H305 208 aa5.17□□□□□ -1.58
VAPB-206ENST00000520497 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
VAPB-206ENST00000520497 RPL37AP61513 92 aaKnown RBP5.16□□□□□ -1.58
VAPB-206ENST00000520497 ATP5EP2Q5VTU8 51 aa5.16□□□□□ -1.58
VAPB-206ENST00000520497 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
VAPB-206ENST00000520497 C3orf22Q8N5N4 141 aa5.15□□□□□ -1.59
VAPB-206ENST00000520497 SPRR4Q96PI1 79 aa5.15□□□□□ -1.59
VAPB-206ENST00000520497 LINC00483Q53H64 154 aa5.14□□□□□ -1.59
VAPB-206ENST00000520497 SMIM29Q86T20 159 aa5.14□□□□□ -1.59
VAPB-206ENST00000520497 HERC1Q15751 4861 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 FAT1Q14517 4588 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 C9orf153Q5TBE3 101 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 Q8NBF4 154 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 IMUPQ9GZP8 106 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 LINC00846Q9NV44 126 aa5.13□□□□□ -1.59
VAPB-206ENST00000520497 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
VAPB-206ENST00000520497 MT-ATP8P03928 68 aa5.11□□□□□ -1.59
VAPB-206ENST00000520497 NREPQ16612 68 aa5.11□□□□□ -1.59
VAPB-206ENST00000520497 Q6Q795 121 aa5.11□□□□□ -1.59
VAPB-206ENST00000520497 IGFL1Q6UW32 110 aa5.11□□□□□ -1.59
VAPB-206ENST00000520497 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
VAPB-206ENST00000520497 TRBV7-7A0A0K0K1E9 115 aa5.1□□□□□ -1.59
VAPB-206ENST00000520497 SPINK6Q6UWN8 80 aa5.1□□□□□ -1.59
VAPB-206ENST00000520497 Q6ZVQ6 151 aa5.1□□□□□ -1.59
VAPB-206ENST00000520497 IGLV9-49A0A0B4J1Y8 123 aa5.09□□□□□ -1.59
VAPB-206ENST00000520497 PLA2G1BP04054 148 aaKnown RBP5.09□□□□□ -1.59
VAPB-206ENST00000520497 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
VAPB-206ENST00000520497 CRYGAP11844 174 aa5.09□□□□□ -1.59
VAPB-206ENST00000520497 Q5VSD8 79 aa5.09□□□□□ -1.59
VAPB-206ENST00000520497 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
VAPB-206ENST00000520497 CXCL6P80162 114 aa5.08□□□□□ -1.6
VAPB-206ENST00000520497 FAM229BQ4G0N7 80 aa5.08□□□□□ -1.6
VAPB-206ENST00000520497 FLG2Q5D862 2391 aaPredicted RBP5.07□□□□□ -1.6
VAPB-206ENST00000520497 MOBPQ13875 183 aa5.07□□□□□ -1.6
VAPB-206ENST00000520497 ANAPC11Q9NYG5 84 aa5.07□□□□□ -1.6
VAPB-206ENST00000520497 SS18L2Q9UHA2 77 aa5.07□□□□□ -1.6
VAPB-206ENST00000520497 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
VAPB-206ENST00000520497 IGKV3D-7A0A0C4DH55 119 aa5.06□□□□□ -1.6
VAPB-206ENST00000520497 A0A087X002 238 aa5.05□□□□□ -1.6
VAPB-206ENST00000520497 BPY2O14599 106 aa5.05□□□□□ -1.6
VAPB-206ENST00000520497 HIST1H4AP62805 103 aaKnown RBP5.05□□□□□ -1.6
VAPB-206ENST00000520497 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
VAPB-206ENST00000520497 A0A087WSZ3 146 aa5.04□□□□□ -1.6
VAPB-206ENST00000520497 CD164Q04900 197 aa5.04□□□□□ -1.6
VAPB-206ENST00000520497 KRTAP13-2Q52LG2 175 aa5.04□□□□□ -1.6
VAPB-206ENST00000520497 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms