RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 H7C423 109 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 LEPROTO15243 131 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 TCL1BO95988 128 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 UBE2AP49459 152 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 LINC01547P58512 204 aaPredicted RBP2.95□□□□□ -1.94
SDCBP-207ENST00000520168 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
SDCBP-207ENST00000520168 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 C5orf38Q86SI9 138 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 C15orf56Q8N910 161 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 Q8N9P0 234 aaPredicted RBP2.95□□□□□ -1.94
SDCBP-207ENST00000520168 DSCR8Q96T75 97 aa2.95□□□□□ -1.94
SDCBP-207ENST00000520168 GVQW2A0A096LPI5 108 aaPredicted RBP2.94□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV9-49A0A0B4J1Y8 123 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 TMEM223A0PJW6 202 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 ZNF815PA8K554 130 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 C1orf137Q5JT78 98 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 C7orf65Q6ZTY9 151 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 CHCHD10Q8WYQ3 142 aaPredicted RBP2.94□□□□□ -1.94
SDCBP-207ENST00000520168 OPRPNQ99935 248 aaPredicted RBP2.94□□□□□ -1.94
SDCBP-207ENST00000520168 PRO0461Q9UI25 63 aa2.94□□□□□ -1.94
SDCBP-207ENST00000520168 TIMM17BO60830 172 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 PRSS2P07478 247 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 ZNF22P17026 224 aaPredicted RBP2.93□□□□□ -1.94
SDCBP-207ENST00000520168 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 NTM-AS1Q6ZSK4 140 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 LINC00337Q8N6G1 96 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 TTTY13Q9BZ97 58 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 TP73-AS1Q9UF72 201 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 UBE2D4Q9Y2X8 147 aa2.93□□□□□ -1.94
SDCBP-207ENST00000520168 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.92□□□□□ -1.94
SDCBP-207ENST00000520168 hADV29S1A0JD25 119 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 IGKV2-29A2NJV5 120 aaPredicted RBP2.92□□□□□ -1.94
SDCBP-207ENST00000520168 BCE1O60756 84 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV7-43P04211 117 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 FXYD2P54710 66 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 LINC00313P59037 77 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 HIST1H4AP62805 103 aaKnown RBP2.92□□□□□ -1.94
SDCBP-207ENST00000520168 HIGD2BQ4VC39 106 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 LINC00643Q86TS7 51 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 FAM104AQ969W3 186 aa2.92□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV4-60A0A075B6I1 120 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 IGLV5-45A0A087WSX0 123 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 K7ERJ3 54 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 ATP11AUNQ6ZP68 121 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 CDC42SE2Q9NRR3 84 aa2.91□□□□□ -1.94
SDCBP-207ENST00000520168 NHP2Q9NX24 153 aaKnown RBP2.91□□□□□ -1.94
SDCBP-207ENST00000520168 ZNF706Q9Y5V0 76 aaPredicted RBP2.91□□□□□ -1.94
SDCBP-207ENST00000520168 A0A0J9YXY3 114 aa2.9□□□□□ -1.95
SDCBP-207ENST00000520168 SYCNQ0VAF6 134 aa2.9□□□□□ -1.95
SDCBP-207ENST00000520168 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
SDCBP-207ENST00000520168 LINC01554Q52M75 96 aa2.9□□□□□ -1.95
SDCBP-207ENST00000520168 NDUFA12Q9UI09 145 aa2.9□□□□□ -1.95
SDCBP-207ENST00000520168 A0A087X002 238 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 IGLV5-39A0A0G2JS06 123 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 NDUFA1O15239 70 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 TSPEAR-AS2P59090 65 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 KRTAP10-6P60371 365 aaPredicted RBP2.89□□□□□ -1.95
SDCBP-207ENST00000520168 C9orf116Q5BN46 136 aaPredicted RBP2.89□□□□□ -1.95
SDCBP-207ENST00000520168 XAGE1AQ9HD64 81 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 CDKN2A-AS1Q9UH64 79 aa2.89□□□□□ -1.95
SDCBP-207ENST00000520168 A0A0B4J2C4 111 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 A0A1W2PNN7 141 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 CFC1BP0CG36 223 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 CFC1P0CG37 223 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 RBM3P98179 157 aaKnown RBP2.88□□□□□ -1.95
SDCBP-207ENST00000520168 RNASE13Q5GAN3 156 aaKnown RBP2.88□□□□□ -1.95
SDCBP-207ENST00000520168 SFTA2Q6UW10 78 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 FP248Q71RG6 208 aaPredicted RBP2.88□□□□□ -1.95
SDCBP-207ENST00000520168 MUSTN1Q8IVN3 82 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 PRO1854Q9UHT4 67 aa2.88□□□□□ -1.95
SDCBP-207ENST00000520168 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
SDCBP-207ENST00000520168 SMIM1B2RUZ4 78 aa2.87□□□□□ -1.95
SDCBP-207ENST00000520168 CCKP06307 115 aa2.87□□□□□ -1.95
SDCBP-207ENST00000520168 SS18Q15532 418 aa2.87□□□□□ -1.95
SDCBP-207ENST00000520168 LITAFQ99732 161 aa2.87□□□□□ -1.95
SDCBP-207ENST00000520168 LINC00959A0A1B0GUT2 108 aa2.86□□□□□ -1.95
SDCBP-207ENST00000520168 COX6CP09669 75 aa2.86□□□□□ -1.95
SDCBP-207ENST00000520168 TYMSOSQ8TAI1 123 aa2.86□□□□□ -1.95
SDCBP-207ENST00000520168 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
SDCBP-207ENST00000520168 FAM218AQ96MZ4 157 aa2.86□□□□□ -1.95
SDCBP-207ENST00000520168 CAMK2N2Q96S95 79 aa2.86□□□□□ -1.95
SDCBP-207ENST00000520168 IGLV7-46A0A075B6I9 117 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 LOC107984156A0A0G2JMH3 177 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 TRBV30A0A0K0K1B3 111 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 ZNF861PO60384 105 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 XCL1P47992 114 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 Q1T7F1 81 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 ADAMTSL4-AS1Q5T5F5 129 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 ARL17AQ8IVW1 177 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 DAND5Q8N907 189 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 COX7B2Q8TF08 81 aa2.85□□□□□ -1.95
SDCBP-207ENST00000520168 TRAV13-2A0A0B4J235 113 aa2.84□□□□□ -1.95
SDCBP-207ENST00000520168 SLC25A20O43772 301 aa2.84□□□□□ -1.95
SDCBP-207ENST00000520168 TLX1NBP0CAT3 122 aa2.84□□□□□ -1.95
SDCBP-207ENST00000520168 C10orf25Q5T742 122 aa2.84□□□□□ -1.95
SDCBP-207ENST00000520168 LINC00308Q8TCZ7 52 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms