RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 Q5VSD8 79 aa1.01□□□□□ -2.25
HMGB1P46-201ENST00000520062 ALMS1Q8TCU4 4167 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 CREBBPQ92793 2442 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 MEGF8Q7Z7M0 2845 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 NOTCH1P46531 2555 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 H0YAA0 97 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 PRO0255Q9UI72 69 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 TRANK1O15050 2925 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 PCNX1Q96RV3 2341 aa1□□□□□ -2.25
HMGB1P46-201ENST00000520062 TFF3Q07654 80 aa0.99□□□□□ -2.25
HMGB1P46-201ENST00000520062 CHD9Q3L8U1 2897 aa0.99□□□□□ -2.25
HMGB1P46-201ENST00000520062 ABCA2Q9BZC7 2435 aa0.98□□□□□ -2.25
HMGB1P46-201ENST00000520062 LOC730098B7Z3J9 87 aa0.98□□□□□ -2.25
HMGB1P46-201ENST00000520062 SPRR1AP35321 89 aa0.98□□□□□ -2.25
HMGB1P46-201ENST00000520062 SPTA1P02549 2419 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 IGLV5-48A0A075B6I7 105 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 H3BUA1 57 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 IAPPP10997 89 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 UBR5O95071 2799 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 POLQO75417 2590 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 AKAP6Q13023 2319 aa0.97□□□□□ -2.25
HMGB1P46-201ENST00000520062 CEP290O15078 2479 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 POLR2KP53803 58 aaKnown RBP0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 DEFB131AP59861 70 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 H1FX-AS1Q4G0G2 97 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 WFDC13Q8IUB5 93 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 DEFB105AQ8NG35 78 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 APLNQ9ULZ1 77 aa0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 SRRM2Q9UQ35 2752 aaKnown RBP0.96□□□□□ -2.26
HMGB1P46-201ENST00000520062 DEFB130BP0DP73 79 aa0.95□□□□□ -2.26
HMGB1P46-201ENST00000520062 DEFB130AP0DP74 79 aa0.95□□□□□ -2.26
HMGB1P46-201ENST00000520062 RPS27P42677 84 aaKnown RBP0.95□□□□□ -2.26
HMGB1P46-201ENST00000520062 RPS27LQ71UM5 84 aaKnown RBP0.95□□□□□ -2.26
HMGB1P46-201ENST00000520062 SPRR1BP22528 89 aa0.94□□□□□ -2.26
HMGB1P46-201ENST00000520062 WT1-ASQ06250 92 aa0.94□□□□□ -2.26
HMGB1P46-201ENST00000520062 ARHGAP5-AS1Q96IT6 56 aa0.94□□□□□ -2.26
HMGB1P46-201ENST00000520062 CELSR2Q9HCU4 2923 aa0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 ATRQ13535 2644 aa0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 ZNF469Q96JG9 3925 aaPredicted RBP0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 ACACAQ13085 2346 aa0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 PRRC2CQ9Y520 2896 aaKnown RBP0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 WFDC10BQ8IUB3 73 aa0.93□□□□□ -2.26
HMGB1P46-201ENST00000520062 DEFB109BQ30KR1 87 aa0.92□□□□□ -2.26
HMGB1P46-201ENST00000520062 LELP1Q5T871 98 aa0.92□□□□□ -2.26
HMGB1P46-201ENST00000520062 KRTAP5-10Q6L8G5 202 aa0.92□□□□□ -2.26
HMGB1P46-201ENST00000520062 TTC28Q96AY4 2481 aa0.92□□□□□ -2.26
HMGB1P46-201ENST00000520062 PKD1L2Q7Z442 2459 aa0.91□□□□□ -2.26
HMGB1P46-201ENST00000520062 CHD7Q9P2D1 2997 aa0.9□□□□□ -2.26
HMGB1P46-201ENST00000520062 VWFP04275 2813 aa0.9□□□□□ -2.26
HMGB1P46-201ENST00000520062 KAAG1Q9UBP8 84 aa0.9□□□□□ -2.27
HMGB1P46-201ENST00000520062 PIEZO1Q92508 2521 aa0.89□□□□□ -2.27
HMGB1P46-201ENST00000520062 RPL39P62891 51 aaKnown RBP0.89□□□□□ -2.27
HMGB1P46-201ENST00000520062 BDP1A6H8Y1 2624 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 NCOR1O75376 2440 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 NOP10Q9NPE3 64 aaKnown RBP0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 HECTD1Q9ULT8 2610 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 CHD8Q9HCK8 2581 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 NAV2Q8IVL1 2488 aa0.88□□□□□ -2.27
HMGB1P46-201ENST00000520062 CHD6Q8TD26 2715 aa0.87□□□□□ -2.27
HMGB1P46-201ENST00000520062 MMP24-AS1A0A0U1RRL7 71 aa0.87□□□□□ -2.27
HMGB1P46-201ENST00000520062 AKAP13Q12802 2813 aa0.86□□□□□ -2.27
HMGB1P46-201ENST00000520062 RPL39LQ96EH5 51 aaKnown RBP0.86□□□□□ -2.27
HMGB1P46-201ENST00000520062 S4R3F8 94 aa0.86□□□□□ -2.27
HMGB1P46-201ENST00000520062 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
HMGB1P46-201ENST00000520062 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 APCP25054 2843 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 PRLHP81277 87 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 KLK9Q2XQG4 91 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 TENM2Q9NT68 2774 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 WNK1Q9H4A3 2382 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 MGAQ8IWI9 3026 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 OTOGQ6ZRI0 2925 aa0.85□□□□□ -2.27
HMGB1P46-201ENST00000520062 SETD2Q9BYW2 2564 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P46-201ENST00000520062 A8MTW9 85 aa0.84□□□□□ -2.27
HMGB1P46-201ENST00000520062 PRCDQ00LT1 54 aa0.84□□□□□ -2.27
HMGB1P46-201ENST00000520062 TENM4Q6N022 2769 aa0.84□□□□□ -2.28
HMGB1P46-201ENST00000520062 M0QY20 66 aa0.83□□□□□ -2.28
HMGB1P46-201ENST00000520062 TTTY10Q9BZA0 68 aa0.83□□□□□ -2.28
HMGB1P46-201ENST00000520062 SPTBN4Q9H254 2564 aa0.83□□□□□ -2.28
HMGB1P46-201ENST00000520062 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
HMGB1P46-201ENST00000520062 FLNCQ14315 2725 aa0.82□□□□□ -2.28
HMGB1P46-201ENST00000520062 EP300Q09472 2414 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P46-201ENST00000520062 CLPSL2Q6UWE3 100 aa0.82□□□□□ -2.28
HMGB1P46-201ENST00000520062 DEFB106AQ8N104 65 aa0.82□□□□□ -2.28
HMGB1P46-201ENST00000520062 CCDC168Q8NDH2 2452 aa0.82□□□□□ -2.28
HMGB1P46-201ENST00000520062 SMR3AQ99954 134 aa0.81□□□□□ -2.28
HMGB1P46-201ENST00000520062 RIF1Q5UIP0 2472 aaKnown RBP0.81□□□□□ -2.28
HMGB1P46-201ENST00000520062 CELSR1Q9NYQ6 3014 aa0.81□□□□□ -2.28
HMGB1P46-201ENST00000520062 HIVEP3Q5T1R4 2406 aa0.8□□□□□ -2.28
HMGB1P46-201ENST00000520062 ZZEF1O43149 2961 aa0.8□□□□□ -2.28
HMGB1P46-201ENST00000520062 USP24Q9UPU5 2620 aa0.8□□□□□ -2.28
HMGB1P46-201ENST00000520062 LRRK2Q5S007 2527 aa0.8□□□□□ -2.28
HMGB1P46-201ENST00000520062 FAM186AA6NE01 2351 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 NF1P21359 2839 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 CEP250Q9BV73 2442 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 MAP1BP46821 2468 aaKnown RBP0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 FRYQ5TBA9 3013 aa0.79□□□□□ -2.28
HMGB1P46-201ENST00000520062 H0YGG7 62 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 439.4 ms