RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 M0R3E3 92 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 C10orf113Q5VZT2 155 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 TMEM263Q8WUH6 116 aaKnown RBP1.58□□□□□ -2.16
VPS13B-207ENST00000518569 LINC00208Q96KT6 92 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 CMC2Q9NRP2 79 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 KIAA2026Q5HYC2 2103 aa1.58□□□□□ -2.16
VPS13B-207ENST00000518569 LOC110117498A0A087WWA1 95 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 TRGV4A0A0C4DH28 118 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 IGKV3D-7A0A0C4DH55 119 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 IGKV3OR2-268A0A0C4DH90 116 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 FXYD3Q14802 87 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 NREPQ16612 68 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 FDCSPQ8NFU4 85 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 WFDC6Q9BQY6 131 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 TTTY12Q9BZ98 90 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 MEGF8Q7Z7M0 2845 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 MED12LQ86YW9 2145 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 DOCK10Q96BY6 2186 aa1.57□□□□□ -2.16
VPS13B-207ENST00000518569 KIAA1549Q9HCM3 1950 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 SONP18583 2426 aaKnown RBP1.56□□□□□ -2.16
VPS13B-207ENST00000518569 MGAM2Q2M2H8 2515 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 IGKV2-29A2NJV5 120 aaPredicted RBP1.56□□□□□ -2.16
VPS13B-207ENST00000518569 J3QRE1 110 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 M0R2N4 97 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 INE1O15225 51 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 FCER1GP30273 86 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 ZNF137PP52743 207 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 WFDC9Q8NEX5 89 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 ANK2Q01484 3957 aa1.56□□□□□ -2.16
VPS13B-207ENST00000518569 HEATR5BQ9P2D3 2071 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 TRAV1-2A0A0B4J238 106 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 TRBV6-1A0A0K0K1D8 114 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 C10orf142B7Z368 130 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 IFI6P09912 130 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 RNASE3P12724 160 aaKnown RBP1.55□□□□□ -2.16
VPS13B-207ENST00000518569 PLNP26678 52 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 S100A3P33764 101 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 CAV3P56539 151 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 RPL38P63173 70 aaKnown RBP1.55□□□□□ -2.16
VPS13B-207ENST00000518569 NCBP2-AS2Q69YL0 99 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 C5orf56Q8N8D9 126 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 SPRR4Q96PI1 79 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 ABRACLQ9P1F3 81 aa1.55□□□□□ -2.16
VPS13B-207ENST00000518569 NCOA6Q14686 2063 aaPredicted RBP1.54□□□□□ -2.16
VPS13B-207ENST00000518569 DOCK11Q5JSL3 2073 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.54□□□□□ -2.16
VPS13B-207ENST00000518569 TRAV21A0A0B4J279 112 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 NBDYA0A0U1RRE5 68 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 ACYP2P14621 99 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 TPRXLQ17RH7 258 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 SPATA8Q6RVD6 105 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 COA5Q86WW8 74 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 SPACA4Q8TDM5 124 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 PLAC8Q9NZF1 115 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 MPDZO75970 2070 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 SPTBP11277 2137 aa1.54□□□□□ -2.16
VPS13B-207ENST00000518569 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.54□□□□□ -2.16
VPS13B-207ENST00000518569 A0A087WTM6 91 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 NCR3O14931 201 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 COX6B1P14854 86 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 FXYD4P59646 89 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 DEFB112Q30KQ8 113 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 DEFB109BQ30KR1 87 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 Q6ZQY7 126 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 GAFA1Q96PS6 74 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 SMR3AQ99954 134 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 TENM1Q9UKZ4 2725 aa1.53□□□□□ -2.16
VPS13B-207ENST00000518569 CR1P17927 2039 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 TRGV2A0A075B6R0 118 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 LCE6AA0A183 80 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 K7EMI3 77 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 DNAJC13O75165 2243 aa1.52□□□□□ -2.17
VPS13B-207ENST00000518569 SVEP1Q4LDE5 3571 aa1.51□□□□□ -2.17
VPS13B-207ENST00000518569 DEFB133Q30KQ1 61 aa1.51□□□□□ -2.17
VPS13B-207ENST00000518569 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
VPS13B-207ENST00000518569 NINQ8N4C6 2090 aa1.51□□□□□ -2.17
VPS13B-207ENST00000518569 WNK1Q9H4A3 2382 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 A0A1B0GU69 56 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 PIN1P1O15428 100 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 HCRTO43612 131 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 DEFB114Q30KQ6 69 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 Q96NJ1 140 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 U3KQA8 63 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 ABCA1O95477 2261 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 USF3Q68DE3 2245 aa1.5□□□□□ -2.17
VPS13B-207ENST00000518569 PRR14LQ5THK1 2151 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 HEATR1Q9H583 2144 aaKnown RBP1.49□□□□□ -2.17
VPS13B-207ENST00000518569 VWFP04275 2813 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 SMIM27A0A1W2PRY6 76 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 NDUFA4O00483 81 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 MRPL33O75394 65 aaKnown RBP1.49□□□□□ -2.17
VPS13B-207ENST00000518569 SPINK7P58062 85 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 C10orf99Q6UWK7 81 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.49□□□□□ -2.17
VPS13B-207ENST00000518569 SMIM11BQ8TCY0 68 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms