RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 CORTO00230 105 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 IFNGP01579 166 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 MT2AP02795 61 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 CCL18P55774 89 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 C8orf59Q8N0T1 100 aaPredicted RBP0.27□□□□□ -2.37
SMN1-210ENST00000518504 TSLPQ969D9 159 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 TMEM203Q969S6 136 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 SPRR2FQ96RM1 72 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 SPANXDQ9BXN6 97 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 LINC00846Q9NV44 126 aa0.27□□□□□ -2.37
SMN1-210ENST00000518504 OOSP1A8MZH6 123 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 F6UZH7 168 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 UQCRHP07919 91 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 TPPP2P59282 170 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 MRPL54Q6P161 138 aaKnown RBP0.26□□□□□ -2.37
SMN1-210ENST00000518504 COMMD6Q7Z4G1 85 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 C5orf38Q86SI9 138 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 BAGE3Q86Y29 109 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 AQP10Q96PS8 301 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 CYP4F30PQ9H0H9 118 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 LENEPQ9Y5L5 61 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 IER3IP1Q9Y5U9 82 aa0.26□□□□□ -2.37
SMN1-210ENST00000518504 H0YGG7 62 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 H3BUX3 64 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 SSSCA1O60232 199 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 PPP1R17O96001 155 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 NMBP08949 121 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 GCHFRP30047 84 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 GNG4P50150 75 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 DEFB136Q30KP8 78 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 KRTAP21-1Q3LI58 79 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 KRTAP20-2Q3LI61 65 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 C9orf153Q5TBE3 101 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 TTC9CQ8N5M4 171 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 MYOZ3Q8TDC0 251 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 LCN9Q8WX39 176 aa0.25□□□□□ -2.37
SMN1-210ENST00000518504 H3BSH0 61 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 SNAPC5O75971 98 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 PPP3R1P63098 170 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 ZNF720Q7Z2F6 126 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 AMELXQ99217 191 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 NDUFA4L2Q9NRX3 87 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 LINC00474Q9P2X8 69 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 GNG8Q9UK08 70 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 R4GMQ9 66 aa0.24□□□□□ -2.37
SMN1-210ENST00000518504 TRBV7-3A0A075B6L6 115 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 UBE2L5PA0A1B0GUS4 154 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 PHGR1C9JFL3 82 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 M0R135 149 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 SMIM6P0DI80 62 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 UBE2L3P68036 154 aaKnown RBP0.23□□□□□ -2.37
SMN1-210ENST00000518504 SPAG11BQ08648 103 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 DEFB135Q30KP9 77 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 CFAP126Q5VTH2 177 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 SPAG11AQ6PDA7 123 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 DEFB106AQ8N104 65 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 MGST2Q99735 147 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 DPH3P1Q9H4G8 78 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 DYNLRB1Q9NP97 96 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 V9GYH0 126 aa0.23□□□□□ -2.37
SMN1-210ENST00000518504 SYNE1Q8NF91 8797 aaKnown RBP0.23□□□□□ -2.37
SMN1-210ENST00000518504 DEFB131BA0A096LNP1 70 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 M0R2T5 61 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 HMGN4O00479 90 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 DEFB4AO15263 64 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 MT1BP07438 61 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 S100A1P23297 94 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 ATP5EP56381 51 aaPredicted RBP0.22□□□□□ -2.37
SMN1-210ENST00000518504 MRPS10P82664 201 aaKnown RBP0.22□□□□□ -2.37
SMN1-210ENST00000518504 COX6A2Q02221 97 aa0.22□□□□□ -2.37
SMN1-210ENST00000518504 FAM24AA6NFZ4 105 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 ZNF815PA8K554 130 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 IFITM1P13164 125 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 WFDC2Q14508 124 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 WHAMMP3Q1A5X7 153 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 SPINK6Q6UWN8 80 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 UBE2DNLQ8IWF7 75 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 SVBPQ8N300 66 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 KAAG1Q9UBP8 84 aa0.21□□□□□ -2.38
SMN1-210ENST00000518504 CTXND1A0A1B0GTU2 59 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 IGLC7A0M8Q6 106 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 M0R1W7 72 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 S100PP25815 95 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 SSBP3-AS1Q7Z2R9 100 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 KRTAP8-1Q8IUC2 63 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 SMIM4Q8WVI0 70 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 CGREF1Q99674 301 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 CDC42SE2Q9NRR3 84 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 LINC01558Q9Y6Z2 57 aa0.2□□□□□ -2.38
SMN1-210ENST00000518504 LOC285095A0A1B0GVY8 99 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 C20orf202A1L168 122 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 F8VRH5 84 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 UQCR11O14957 56 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 SPINK8P0C7L1 97 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 SNRPFP62306 86 aaKnown RBP0.19□□□□□ -2.38
SMN1-210ENST00000518504 HSD52Q0P140 79 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 COX17Q14061 63 aa0.19□□□□□ -2.38
SMN1-210ENST00000518504 DEFB114Q30KQ6 69 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms