RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 RPL37AP61513 92 aaKnown RBP2.44□□□□□ -2.02
SREK1-204ENST00000518110 PCOTHQ58A44 107 aa2.44□□□□□ -2.02
SREK1-204ENST00000518110 C10orf99Q6UWK7 81 aa2.44□□□□□ -2.02
SREK1-204ENST00000518110 LAMA2P24043 3122 aaKnown RBP2.44□□□□□ -2.02
SREK1-204ENST00000518110 ANKHD1Q8IWZ3 2542 aaKnown RBP2.44□□□□□ -2.02
SREK1-204ENST00000518110 KALRNO60229 2985 aa2.44□□□□□ -2.02
SREK1-204ENST00000518110 CACNA1HO95180 2353 aa2.44□□□□□ -2.02
SREK1-204ENST00000518110 PIEZO2Q9H5I5 2752 aa2.44□□□□□ -2.02
SREK1-204ENST00000518110 MKI67P46013 3256 aaKnown RBP2.43□□□□□ -2.02
SREK1-204ENST00000518110 H3BNG1 76 aa2.43□□□□□ -2.02
SREK1-204ENST00000518110 TRIOO75962 3097 aa2.43□□□□□ -2.02
SREK1-204ENST00000518110 BRCA2P51587 3418 aa2.43□□□□□ -2.02
SREK1-204ENST00000518110 AKAP6Q13023 2319 aa2.42□□□□□ -2.02
SREK1-204ENST00000518110 FRYLO94915 3013 aa2.42□□□□□ -2.02
SREK1-204ENST00000518110 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
SREK1-204ENST00000518110 C8orf17Q9NRJ1 99 aa2.42□□□□□ -2.02
SREK1-204ENST00000518110 DSPP15924 2871 aaKnown RBP2.42□□□□□ -2.02
SREK1-204ENST00000518110 CREBBPQ92793 2442 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 USP34Q70CQ2 3546 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 A8MUU9 505 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 P0C880 135 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 DEFB130BP0DP73 79 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 DEFB130AP0DP74 79 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 CFAP47Q6ZTR5 3102 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 C2CD3Q4AC94 2353 aa2.41□□□□□ -2.02
SREK1-204ENST00000518110 KMT2BQ9UMN6 2715 aaPredicted RBP2.4□□□□□ -2.02
SREK1-204ENST00000518110 PTPRZ1P23471 2315 aaPredicted RBP2.4□□□□□ -2.02
SREK1-204ENST00000518110 LAMA1P25391 3075 aa2.4□□□□□ -2.03
SREK1-204ENST00000518110 NCOR1O75376 2440 aa2.4□□□□□ -2.03
SREK1-204ENST00000518110 AKAP13Q12802 2813 aa2.4□□□□□ -2.03
SREK1-204ENST00000518110 NUPR2A6NF83 97 aa2.39□□□□□ -2.03
SREK1-204ENST00000518110 DEFB136Q30KP8 78 aa2.39□□□□□ -2.03
SREK1-204ENST00000518110 LAMA3Q16787 3333 aa2.39□□□□□ -2.03
SREK1-204ENST00000518110 A0A096LPF7 62 aa2.38□□□□□ -2.03
SREK1-204ENST00000518110 LY6G6CO95867 125 aa2.38□□□□□ -2.03
SREK1-204ENST00000518110 Q96NJ1 140 aa2.38□□□□□ -2.03
SREK1-204ENST00000518110 FREM2Q5SZK8 3169 aa2.38□□□□□ -2.03
SREK1-204ENST00000518110 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.37□□□□□ -2.031e-6■■■□□ 17.9
SREK1-204ENST00000518110 VCANP13611 3396 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 SPART-AS1P0CW21 52 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 LINC01556Q5JQF7 62 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 LINC00304Q8N9R0 145 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 C20orf166-AS1Q96NR2 134 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 CCL19Q99731 98 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 PRRC2CQ9Y520 2896 aaKnown RBP2.37□□□□□ -2.03
SREK1-204ENST00000518110 PRUNE2Q8WUY3 3088 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 REV3LO60673 3130 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 ABCA2Q9BZC7 2435 aa2.37□□□□□ -2.03
SREK1-204ENST00000518110 CEP290O15078 2479 aa2.36□□□□□ -2.03
SREK1-204ENST00000518110 DEFB124Q8NES8 71 aa2.36□□□□□ -2.03
SREK1-204ENST00000518110 TACC2O95359 2948 aa2.36□□□□□ -2.03
SREK1-204ENST00000518110 WDFY4Q6ZS81 3184 aa2.36□□□□□ -2.03
SREK1-204ENST00000518110 HIVEP2P31629 2446 aa2.36□□□□□ -2.03
SREK1-204ENST00000518110 CDH23Q9H251 3354 aa2.35□□□□□ -2.03
SREK1-204ENST00000518110 ZDBF2Q9HCK1 2354 aa2.35□□□□□ -2.03
SREK1-204ENST00000518110 SPTAN1Q13813 2472 aaKnown RBP2.34□□□□□ -2.03
SREK1-204ENST00000518110 MAP1AP78559 2803 aaPredicted RBP2.34□□□□□ -2.03
SREK1-204ENST00000518110 SPTBN5Q9NRC6 3674 aaKnown RBP2.34□□□□□ -2.03
SREK1-204ENST00000518110 ACACAQ13085 2346 aa2.34□□□□□ -2.03
SREK1-204ENST00000518110 K7ERS5 55 aa2.34□□□□□ -2.03
SREK1-204ENST00000518110 ALMS1Q8TCU4 4167 aa2.34□□□□□ -2.03
SREK1-204ENST00000518110 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
SREK1-204ENST00000518110 A0A087WTM6 91 aa2.33□□□□□ -2.04
SREK1-204ENST00000518110 SPTA1P02549 2419 aa2.33□□□□□ -2.04
SREK1-204ENST00000518110 WDFY3Q8IZQ1 3526 aa2.33□□□□□ -2.04
SREK1-204ENST00000518110 DMXL2Q8TDJ6 3036 aa2.32□□□□□ -2.04
SREK1-204ENST00000518110 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
SREK1-204ENST00000518110 A0A1W2PNN7 141 aa2.32□□□□□ -2.04
SREK1-204ENST00000518110 DEFB113Q30KQ7 82 aa2.32□□□□□ -2.04
SREK1-204ENST00000518110 ANKRD17O75179 2603 aaKnown RBP2.32□□□□□ -2.04
SREK1-204ENST00000518110 CHD6Q8TD26 2715 aa2.32□□□□□ -2.04
SREK1-204ENST00000518110 COX6B2Q6YFQ2 88 aa2.31□□□□□ -2.04
SREK1-204ENST00000518110 SPEGQ15772 3267 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 H0YAA0 97 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 Q6ZSA8 131 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 ITPR1Q14643 2758 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 DMDP11532 3685 aa2.3□□□□□ -2.04
SREK1-204ENST00000518110 A0A1B0GU33 70 aa2.29□□□□□ -2.04
SREK1-204ENST00000518110 PRLHP81277 87 aa2.29□□□□□ -2.04
SREK1-204ENST00000518110 DCHS1Q96JQ0 3298 aa2.29□□□□□ -2.04
SREK1-204ENST00000518110 NCOR2Q9Y618 2525 aa2.28□□□□□ -2.04
SREK1-204ENST00000518110 SPG11Q96JI7 2443 aa2.28□□□□□ -2.04
SREK1-204ENST00000518110 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
SREK1-204ENST00000518110 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
SREK1-204ENST00000518110 HRNRQ86YZ3 2850 aaPredicted RBP2.28□□□□□ -2.04
SREK1-204ENST00000518110 CELSR3Q9NYQ7 3312 aa2.27□□□□□ -2.05
SREK1-204ENST00000518110 K7EIL1 84 aa2.27□□□□□ -2.05
SREK1-204ENST00000518110 H1FX-AS1Q4G0G2 97 aa2.27□□□□□ -2.05
SREK1-204ENST00000518110 DCHS2Q6V1P9 2916 aa2.27□□□□□ -2.05
SREK1-204ENST00000518110 NBASA2RRP1 2371 aa2.27□□□□□ -2.05
SREK1-204ENST00000518110 DEFB135Q30KP9 77 aa2.26□□□□□ -2.05
SREK1-204ENST00000518110 PSORS1C2Q9UIG4 136 aa2.26□□□□□ -2.05
SREK1-204ENST00000518110 TENM2Q9NT68 2774 aa2.26□□□□□ -2.05
SREK1-204ENST00000518110 ADGRG4Q8IZF6 3080 aa2.26□□□□□ -2.05
SREK1-204ENST00000518110 HTN3P15516 51 aa2.25□□□□□ -2.05
SREK1-204ENST00000518110 SSBP3-AS1Q7Z2R9 100 aa2.25□□□□□ -2.05
SREK1-204ENST00000518110 CSPG4Q6UVK1 2322 aa2.25□□□□□ -2.05
SREK1-204ENST00000518110 GVINP1Q7Z2Y8 2422 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms