RNA–Protein interactions for RNA: ENST00000517924.5

LAPTM4B-202, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 5

Gene LAPTM4B, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-202ENST00000517924 F8WEM9 126 aa13.39□□□□□ -0.27
LAPTM4B-202ENST00000517924 SPATA45Q537H7 98 aa13.39□□□□□ -0.27
LAPTM4B-202ENST00000517924 CFC1BP0CG36 223 aa13.38□□□□□ -0.27
LAPTM4B-202ENST00000517924 CFC1P0CG37 223 aa13.38□□□□□ -0.27
LAPTM4B-202ENST00000517924 PCOTHQ58A44 107 aa13.37□□□□□ -0.27
LAPTM4B-202ENST00000517924 BVES-AS1Q5T3Y7 98 aa13.35□□□□□ -0.27
LAPTM4B-202ENST00000517924 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
LAPTM4B-202ENST00000517924 IGFL1Q6UW32 110 aa13.34□□□□□ -0.27
LAPTM4B-202ENST00000517924 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.34□□□□□ -0.27
LAPTM4B-202ENST00000517924 KRTAP9-2Q9BYQ4 174 aa13.34□□□□□ -0.27
LAPTM4B-202ENST00000517924 IGLV8-61A0A075B6I0 122 aa13.33□□□□□ -0.28
LAPTM4B-202ENST00000517924 VAMP8Q9BV40 100 aa13.33□□□□□ -0.28
LAPTM4B-202ENST00000517924 HIGD1BQ9P298 99 aa13.33□□□□□ -0.28
LAPTM4B-202ENST00000517924 OCIAD2Q56VL3 154 aa13.31□□□□□ -0.28
LAPTM4B-202ENST00000517924 TCL1BO95988 128 aa13.3□□□□□ -0.28
LAPTM4B-202ENST00000517924 Q6JHZ5 121 aa13.3□□□□□ -0.28
LAPTM4B-202ENST00000517924 CLEC2BQ92478 149 aa13.3□□□□□ -0.28
LAPTM4B-202ENST00000517924 RAB37Q96AX2 223 aa13.3□□□□□ -0.28
LAPTM4B-202ENST00000517924 A0A0B4J2C4 111 aa13.27□□□□□ -0.29
LAPTM4B-202ENST00000517924 TRBV7-7A0A0K0K1E9 115 aa13.27□□□□□ -0.29
LAPTM4B-202ENST00000517924 FAM218AQ96MZ4 157 aa13.27□□□□□ -0.29
LAPTM4B-202ENST00000517924 H3BUT2 72 aa13.26□□□□□ -0.29
LAPTM4B-202ENST00000517924 LCE2CQ5TA81 110 aa13.25□□□□□ -0.29
LAPTM4B-202ENST00000517924 SNHG12Q9BXW3 62 aa13.25□□□□□ -0.29
LAPTM4B-202ENST00000517924 KRTAP19-2Q3LHN2 52 aa13.24□□□□□ -0.29
LAPTM4B-202ENST00000517924 CEND1Q8N111 149 aa13.24□□□□□ -0.29
LAPTM4B-202ENST00000517924 PPDPFLQ8WWR9 84 aa13.24□□□□□ -0.29
LAPTM4B-202ENST00000517924 FXYD2P54710 66 aa13.2□□□□□ -0.3
LAPTM4B-202ENST00000517924 RPL37P61927 97 aaKnown RBP13.19□□□□□ -0.3
LAPTM4B-202ENST00000517924 H0YGX0 51 aa13.18□□□□□ -0.3
LAPTM4B-202ENST00000517924 PYY3Q5JQD4 70 aa13.16□□□□□ -0.3
LAPTM4B-202ENST00000517924 PRO1854Q9UHT4 67 aa13.16□□□□□ -0.3
LAPTM4B-202ENST00000517924 TMEM238LA0A1B0GVL6 79 aa13.12□□□□□ -0.31
LAPTM4B-202ENST00000517924 A6NJY4 79 aa13.12□□□□□ -0.31
LAPTM4B-202ENST00000517924 NDUFV3P56181 108 aaKnown RBP13.12□□□□□ -0.31
LAPTM4B-202ENST00000517924 TRIAP1O43715 76 aa13.11□□□□□ -0.31
LAPTM4B-202ENST00000517924 SNCGO76070 127 aa13.1□□□□□ -0.31
LAPTM4B-202ENST00000517924 OBSCN-AS1Q96MR7 158 aa13.07□□□□□ -0.32
LAPTM4B-202ENST00000517924 K7ERJ3 54 aa13.06□□□□□ -0.32
LAPTM4B-202ENST00000517924 LST1O00453 97 aa13.06□□□□□ -0.32
LAPTM4B-202ENST00000517924 MT1HP80294 61 aa13.06□□□□□ -0.32
LAPTM4B-202ENST00000517924 FABP2P12104 132 aa13.05□□□□□ -0.32
LAPTM4B-202ENST00000517924 Q6Q795 121 aa13.05□□□□□ -0.32
LAPTM4B-202ENST00000517924 TMA7Q9Y2S6 64 aaKnown RBP13.05□□□□□ -0.32
LAPTM4B-202ENST00000517924 A0A1B0GX51 115 aa13.04□□□□□ -0.32
LAPTM4B-202ENST00000517924 H3BMG7 143 aa13.03□□□□□ -0.32
LAPTM4B-202ENST00000517924 HSD52Q0P140 79 aa13.03□□□□□ -0.32
LAPTM4B-202ENST00000517924 TEN1Q86WV5 123 aa13.02□□□□□ -0.33
LAPTM4B-202ENST00000517924 A0A087WSZ3 146 aa12.99□□□□□ -0.33
LAPTM4B-202ENST00000517924 SS18L2Q9UHA2 77 aa12.98□□□□□ -0.33
LAPTM4B-202ENST00000517924 A0A1W2PNM2 257 aa12.96□□□□□ -0.33
LAPTM4B-202ENST00000517924 PSMB2P49721 201 aa12.96□□□□□ -0.33
LAPTM4B-202ENST00000517924 Q96NJ1 140 aa12.96□□□□□ -0.33
LAPTM4B-202ENST00000517924 A0A1B0GV72 72 aa12.95□□□□□ -0.34
LAPTM4B-202ENST00000517924 Q75L30 129 aa12.95□□□□□ -0.34
LAPTM4B-202ENST00000517924 GHRHP01286 108 aa12.92□□□□□ -0.34
LAPTM4B-202ENST00000517924 UQCR10Q9UDW1 63 aa12.92□□□□□ -0.34
LAPTM4B-202ENST00000517924 ORMDL1Q9P0S3 153 aa12.91□□□□□ -0.34
LAPTM4B-202ENST00000517924 DNAL4O96015 105 aa12.9□□□□□ -0.34
LAPTM4B-202ENST00000517924 LCE2DQ5TA82 110 aaPredicted RBP12.88□□□□□ -0.35
LAPTM4B-202ENST00000517924 ATP11AUNQ6ZP68 121 aa12.88□□□□□ -0.35
LAPTM4B-202ENST00000517924 KRTAP9-6A0A140TA67 174 aa12.87□□□□□ -0.35
LAPTM4B-202ENST00000517924 COX6B2Q6YFQ2 88 aa12.86□□□□□ -0.35
LAPTM4B-202ENST00000517924 ANKRD29Q8N6D5 301 aa12.86□□□□□ -0.35
LAPTM4B-202ENST00000517924 COX6CP09669 75 aa12.85□□□□□ -0.35
LAPTM4B-202ENST00000517924 DSCR10P59022 87 aa12.83□□□□□ -0.36
LAPTM4B-202ENST00000517924 C20orf166-AS1Q96NR2 134 aa12.83□□□□□ -0.36
LAPTM4B-202ENST00000517924 TMEM256-PLSCR3K7ERE1 68 aa12.81□□□□□ -0.36
LAPTM4B-202ENST00000517924 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
LAPTM4B-202ENST00000517924 A8MUU9 505 aa12.8□□□□□ -0.36
LAPTM4B-202ENST00000517924 LORP23490 312 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-202ENST00000517924 KRTAP10-6P60371 365 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-202ENST00000517924 SIGMAR1Q99720 223 aa12.8□□□□□ -0.36
LAPTM4B-202ENST00000517924 H3BQ85 93 aa12.79□□□□□ -0.36
LAPTM4B-202ENST00000517924 FLGP20930 4061 aaPredicted RBP12.78□□□□□ -0.36
LAPTM4B-202ENST00000517924 M0R2T5 61 aa12.76□□□□□ -0.37
LAPTM4B-202ENST00000517924 TRACP01848 142 aa12.75□□□□□ -0.37
LAPTM4B-202ENST00000517924 CCKP06307 115 aa12.75□□□□□ -0.37
LAPTM4B-202ENST00000517924 IGKV4-1P06312 121 aa12.75□□□□□ -0.37
LAPTM4B-202ENST00000517924 UBE2V1Q13404 147 aa12.75□□□□□ -0.37
LAPTM4B-202ENST00000517924 DEFB116Q30KQ4 102 aa12.75□□□□□ -0.37
LAPTM4B-202ENST00000517924 SCGB1C2P0DMR2 95 aa12.74□□□□□ -0.37
LAPTM4B-202ENST00000517924 NOTCH2NLQ7Z3S9 236 aa12.72□□□□□ -0.37
LAPTM4B-202ENST00000517924 LINC00472Q9H8W2 130 aa12.7□□□□□ -0.38
LAPTM4B-202ENST00000517924 KRTAP16-1A8MUX0 517 aa12.69□□□□□ -0.38
LAPTM4B-202ENST00000517924 LINC00313P59037 77 aa12.68□□□□□ -0.38
LAPTM4B-202ENST00000517924 VPS25Q9BRG1 176 aa12.67□□□□□ -0.38
LAPTM4B-202ENST00000517924 NAA38Q9BRA0 125 aaKnown RBP12.65□□□□□ -0.38
LAPTM4B-202ENST00000517924 BAALC-AS2P0C853 105 aa12.63□□□□□ -0.39
LAPTM4B-202ENST00000517924 RBM3P98179 157 aaKnown RBP12.63□□□□□ -0.39
LAPTM4B-202ENST00000517924 FSIP2Q5CZC0 6907 aa12.62□□□□□ -0.39
LAPTM4B-202ENST00000517924 IGHV6-1A0A0B4J1U7 121 aa12.6□□□□□ -0.39
LAPTM4B-202ENST00000517924 DSCR8Q96T75 97 aa12.59□□□□□ -0.39
LAPTM4B-202ENST00000517924 CRCT1Q9UGL9 99 aa12.57□□□□□ -0.4
LAPTM4B-202ENST00000517924 M0R143 59 aa12.56□□□□□ -0.4
LAPTM4B-202ENST00000517924 C9JAW5 83 aa12.53□□□□□ -0.4
LAPTM4B-202ENST00000517924 TRBV20-1A0A075B6N2 111 aa12.51□□□□□ -0.41
LAPTM4B-202ENST00000517924 A0A1B0GVX0 72 aa12.51□□□□□ -0.41
LAPTM4B-202ENST00000517924 SMIM6P0DI80 62 aa12.5□□□□□ -0.41
LAPTM4B-202ENST00000517924 ATXN8Q156A1 80 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms