RNA–Protein interactions for RNA: ENST00000517910.1

AP003356.1-202, humanhuman

TSL 2 BASIC

Gene AP003356.1, Length 2,770 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003356.1-202ENST00000517910 TLX1NBP0CAT3 122 aa12.33□□□□□ -0.44
AP003356.1-202ENST00000517910 CDC42SE1Q9NRR8 79 aa12.31□□□□□ -0.44
AP003356.1-202ENST00000517910 CNBPP62633 177 aaKnown RBP12.3□□□□□ -0.44
AP003356.1-202ENST00000517910 REG3GQ6UW15 175 aa12.28□□□□□ -0.44
AP003356.1-202ENST00000517910 OTOGQ6ZRI0 2925 aa12.26□□□□□ -0.45
AP003356.1-202ENST00000517910 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
AP003356.1-202ENST00000517910 IGLV7-46A0A075B6I9 117 aa12.25□□□□□ -0.45
AP003356.1-202ENST00000517910 KRTAP1-1Q07627 177 aa12.25□□□□□ -0.45
AP003356.1-202ENST00000517910 H3BNG1 76 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 SPAG11AQ6PDA7 123 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 C7orf65Q6ZTY9 151 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 PDZD2O15018 2839 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 MOBPQ13875 183 aa12.24□□□□□ -0.45
AP003356.1-202ENST00000517910 PCOTHQ58A44 107 aa12.23□□□□□ -0.45
AP003356.1-202ENST00000517910 BAHCC1Q9P281 2608 aa12.23□□□□□ -0.45
AP003356.1-202ENST00000517910 PRLHP81277 87 aa12.22□□□□□ -0.45
AP003356.1-202ENST00000517910 A8MWP4 228 aa12.22□□□□□ -0.45
AP003356.1-202ENST00000517910 TRRAPQ9Y4A5 3859 aa12.21□□□□□ -0.45
AP003356.1-202ENST00000517910 UBR5O95071 2799 aaPredicted RBP12.21□□□□□ -0.46
AP003356.1-202ENST00000517910 IGLV8-61A0A075B6I0 122 aa12.2□□□□□ -0.46
AP003356.1-202ENST00000517910 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
AP003356.1-202ENST00000517910 LINC01558Q9Y6Z2 57 aa12.19□□□□□ -0.46
AP003356.1-202ENST00000517910 CSMD3Q7Z407 3707 aa12.18□□□□□ -0.46
AP003356.1-202ENST00000517910 H0Y9J4 135 aa12.17□□□□□ -0.46
AP003356.1-202ENST00000517910 LINC00472Q9H8W2 130 aa12.16□□□□□ -0.46
AP003356.1-202ENST00000517910 SPINK7P58062 85 aa12.15□□□□□ -0.46
AP003356.1-202ENST00000517910 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
AP003356.1-202ENST00000517910 TENM1Q9UKZ4 2725 aa12.13□□□□□ -0.47
AP003356.1-202ENST00000517910 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
AP003356.1-202ENST00000517910 MMP24-AS1A0A0U1RRL7 71 aa12.12□□□□□ -0.47
AP003356.1-202ENST00000517910 SRRM2Q9UQ35 2752 aaKnown RBP12.1□□□□□ -0.47
AP003356.1-202ENST00000517910 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
AP003356.1-202ENST00000517910 C11orf45Q8TAV5 145 aa12.1□□□□□ -0.47
AP003356.1-202ENST00000517910 DNAH10OSP0CZ25 163 aa12.09□□□□□ -0.47
AP003356.1-202ENST00000517910 DEFB131BA0A096LNP1 70 aa12.07□□□□□ -0.48
AP003356.1-202ENST00000517910 A0A096LNI7 61 aa12.06□□□□□ -0.48
AP003356.1-202ENST00000517910 IGKV2-24A0A0C4DH68 120 aa12.04□□□□□ -0.48
AP003356.1-202ENST00000517910 HRES1P13985 223 aa12.03□□□□□ -0.48
AP003356.1-202ENST00000517910 SMR3AQ99954 134 aa12.03□□□□□ -0.48
AP003356.1-202ENST00000517910 ITPR2Q14571 2701 aa12.01□□□□□ -0.49
AP003356.1-202ENST00000517910 C8orf87E5RJ46 101 aa12.01□□□□□ -0.49
AP003356.1-202ENST00000517910 TENM3Q9P273 2699 aa12□□□□□ -0.49
AP003356.1-202ENST00000517910 ATRQ13535 2644 aa12□□□□□ -0.49
AP003356.1-202ENST00000517910 TP53AIP1Q9HCN2 124 aa12□□□□□ -0.49
AP003356.1-202ENST00000517910 LINC00313P59037 77 aa11.98□□□□□ -0.49
AP003356.1-202ENST00000517910 TENM2Q9NT68 2774 aa11.98□□□□□ -0.49
AP003356.1-202ENST00000517910 PRAC1Q96KF2 57 aa11.96□□□□□ -0.49
AP003356.1-202ENST00000517910 FBN1P35555 2871 aaKnown RBP11.96□□□□□ -0.49
AP003356.1-202ENST00000517910 Q6ZR54 194 aa11.95□□□□□ -0.5
AP003356.1-202ENST00000517910 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
AP003356.1-202ENST00000517910 SPRR1BP22528 89 aa11.94□□□□□ -0.5
AP003356.1-202ENST00000517910 KRTAP11-1Q8IUC1 163 aa11.91□□□□□ -0.5
AP003356.1-202ENST00000517910 TENM4Q6N022 2769 aa11.91□□□□□ -0.5
AP003356.1-202ENST00000517910 ASB16-AS1Q495Z4 193 aa11.91□□□□□ -0.5
AP003356.1-202ENST00000517910 PRR26Q8N8Z3 221 aa11.91□□□□□ -0.5
AP003356.1-202ENST00000517910 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
AP003356.1-202ENST00000517910 DNAH1Q9P2D7 4330 aa11.87□□□□□ -0.51
AP003356.1-202ENST00000517910 ADM2Q7Z4H4 148 aa11.87□□□□□ -0.51
AP003356.1-202ENST00000517910 Q96NJ1 140 aa11.86□□□□□ -0.51
AP003356.1-202ENST00000517910 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
AP003356.1-202ENST00000517910 IGHV6-1A0A0B4J1U7 121 aa11.85□□□□□ -0.51
AP003356.1-202ENST00000517910 ANK2Q01484 3957 aa11.84□□□□□ -0.51
AP003356.1-202ENST00000517910 CHTF8P0CG12 524 aa11.82□□□□□ -0.52
AP003356.1-202ENST00000517910 COL7A1Q02388 2944 aa11.81□□□□□ -0.52
AP003356.1-202ENST00000517910 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
AP003356.1-202ENST00000517910 FASNP49327 2511 aaKnown RBP11.79□□□□□ -0.52
AP003356.1-202ENST00000517910 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
AP003356.1-202ENST00000517910 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
AP003356.1-202ENST00000517910 MRPL34Q9BQ48 92 aaKnown RBP11.79□□□□□ -0.52
AP003356.1-202ENST00000517910 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
AP003356.1-202ENST00000517910 K7EIL1 84 aa11.77□□□□□ -0.53
AP003356.1-202ENST00000517910 PLA2G1BP04054 148 aaKnown RBP11.77□□□□□ -0.53
AP003356.1-202ENST00000517910 LINC01554Q52M75 96 aa11.77□□□□□ -0.53
AP003356.1-202ENST00000517910 HELZ2Q9BYK8 2649 aaKnown RBP11.76□□□□□ -0.53
AP003356.1-202ENST00000517910 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
AP003356.1-202ENST00000517910 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
AP003356.1-202ENST00000517910 MDFIQ99750 246 aa11.74□□□□□ -0.53
AP003356.1-202ENST00000517910 INAFM1C9JVW0 142 aa11.73□□□□□ -0.53
AP003356.1-202ENST00000517910 A0A087X002 238 aa11.73□□□□□ -0.53
AP003356.1-202ENST00000517910 NOTCH2NLQ7Z3S9 236 aa11.73□□□□□ -0.53
AP003356.1-202ENST00000517910 ACYP2P14621 99 aa11.7□□□□□ -0.54
AP003356.1-202ENST00000517910 MAST4O15021 2626 aa11.69□□□□□ -0.54
AP003356.1-202ENST00000517910 NSD1Q96L73 2696 aaPredicted RBP11.68□□□□□ -0.54
AP003356.1-202ENST00000517910 Q5W150 140 aa11.67□□□□□ -0.54
AP003356.1-202ENST00000517910 LYSTQ99698 3801 aa11.66□□□□□ -0.54
AP003356.1-202ENST00000517910 H3BS24 57 aa11.66□□□□□ -0.54
AP003356.1-202ENST00000517910 A0A1B0GU69 56 aa11.65□□□□□ -0.54
AP003356.1-202ENST00000517910 HECTD1Q9ULT8 2610 aa11.64□□□□□ -0.55
AP003356.1-202ENST00000517910 ALMS1Q8TCU4 4167 aa11.64□□□□□ -0.55
AP003356.1-202ENST00000517910 KRTAP1-5Q9BYS1 174 aa11.64□□□□□ -0.55
AP003356.1-202ENST00000517910 RTL8CO15255 209 aa11.64□□□□□ -0.55
AP003356.1-202ENST00000517910 KRTAP13-1Q8IUC0 172 aa11.62□□□□□ -0.55
AP003356.1-202ENST00000517910 SPATA8Q6RVD6 105 aa11.61□□□□□ -0.55
AP003356.1-202ENST00000517910 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
AP003356.1-202ENST00000517910 COL6A5A8TX70 2615 aa11.6□□□□□ -0.55
AP003356.1-202ENST00000517910 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
AP003356.1-202ENST00000517910 MIR22HGQ0VDD5 57 aa11.56□□□□□ -0.56
AP003356.1-202ENST00000517910 SPINK6Q6UWN8 80 aa11.55□□□□□ -0.56
AP003356.1-202ENST00000517910 DMAC1Q96GE9 116 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms