RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 VPS25Q9BRG1 176 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 LPAR5Q9H1C0 372 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 ZFP30Q9Y2G7 519 aa1.15□□□□□ -2.23
CPNE3-204ENST00000517862 IGKV3D-7A0A0C4DH55 119 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 IGKV3OR2-268A0A0C4DH90 116 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 FAM236AA0A1B0GUQ0 79 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 FAM236BA0A1B0GV22 79 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 H3BRM9 83 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 EDF1O60869 148 aaKnown RBP1.14□□□□□ -2.23
CPNE3-204ENST00000517862 CD3DP04234 171 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 LSM3P62310 102 aaKnown RBP1.14□□□□□ -2.23
CPNE3-204ENST00000517862 CLLU1Q5K131 121 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 UNQ6190/PRO20217Q6UXQ8 127 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 CASC2Q6XLA1 102 aa1.14□□□□□ -2.23
CPNE3-204ENST00000517862 IGHV1-24A0A0C4DH33 117 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 J3QR89 54 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 COX7CP15954 63 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 MT1XP80297 61 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 CIB3Q96Q77 187 aaPredicted RBP1.13□□□□□ -2.23
CPNE3-204ENST00000517862 LIMD2Q9BT23 127 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 MED9Q9NWA0 146 aa1.13□□□□□ -2.23
CPNE3-204ENST00000517862 SNRPGP15A8MWD9 76 aa1.12□□□□□ -2.23
CPNE3-204ENST00000517862 PPYP01298 95 aa1.12□□□□□ -2.23
CPNE3-204ENST00000517862 NCS1P62166 190 aa1.12□□□□□ -2.23
CPNE3-204ENST00000517862 SMIM7Q9BQ49 75 aa1.12□□□□□ -2.23
CPNE3-204ENST00000517862 GNG8Q9UK08 70 aa1.12□□□□□ -2.23
CPNE3-204ENST00000517862 LSM2Q9Y333 95 aaKnown RBP1.12□□□□□ -2.23
CPNE3-204ENST00000517862 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 LOC110117498A0A087WWA1 95 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 H0YAA0 97 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 INE1O15225 51 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 SMIM11AP58511 58 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 RPS25P62851 125 aaKnown RBP1.11□□□□□ -2.23
CPNE3-204ENST00000517862 PPP3R1P63098 170 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 CSAG1Q6PB30 78 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 IZUMO2Q6UXV1 221 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 OR10AG1Q8NH19 301 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 TMEM14CQ9P0S9 112 aa1.11□□□□□ -2.23
CPNE3-204ENST00000517862 IGKV2-40A0A087WW87 121 aaPredicted RBP1.1□□□□□ -2.23
CPNE3-204ENST00000517862 IGKV2-29A2NJV5 120 aaPredicted RBP1.1□□□□□ -2.23
CPNE3-204ENST00000517862 BBIP1A8MTZ0 92 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 IGKV2D-40P01614 121 aaPredicted RBP1.1□□□□□ -2.23
CPNE3-204ENST00000517862 IL7P13232 177 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 IQCJQ1A5X6 159 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 Q86TA4 180 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 CCDC167Q9P0B6 97 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 ERG28Q9UKR5 140 aa1.1□□□□□ -2.23
CPNE3-204ENST00000517862 TRBV7-3A0A075B6L6 115 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 JMJD7-PLA2G4BH0Y9G9 81 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 IGKCP01834 107 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 NMBP08949 121 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 PRLHP81277 87 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 CATR1Q13166 79 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 C22orf24Q9Y442 160 aa1.09□□□□□ -2.23
CPNE3-204ENST00000517862 PNMA8CA0A1B0GUJ8 204 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 A0A1B0GV90 55 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 IFITM5A6NNB3 132 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 MT1GP13640 62 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 MIC13Q5XKP0 118 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 SNX29P2Q8IUI4 249 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 SPRR4Q96PI1 79 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 AQP10Q96PS8 301 aa1.08□□□□□ -2.24
CPNE3-204ENST00000517862 TRBV25-1A0A075B6N4 114 aa1.07□□□□□ -2.24
CPNE3-204ENST00000517862 ADCYAP1P18509 176 aa1.07□□□□□ -2.24
CPNE3-204ENST00000517862 RRAS2P62070 204 aaPredicted RBP1.07□□□□□ -2.24
CPNE3-204ENST00000517862 OCIAD2Q56VL3 154 aa1.07□□□□□ -2.24
CPNE3-204ENST00000517862 SSBP3-AS1Q7Z2R9 100 aa1.07□□□□□ -2.24
CPNE3-204ENST00000517862 AGPAT4-IT1Q9H0P7 198 aa1.07□□□□□ -2.24
CPNE3-204ENST00000517862 TRBV10-1A0A0K0K1A3 114 aa1.06□□□□□ -2.24
CPNE3-204ENST00000517862 FXYD4P59646 89 aa1.06□□□□□ -2.24
CPNE3-204ENST00000517862 NAA60Q9H7X0 242 aa1.06□□□□□ -2.24
CPNE3-204ENST00000517862 PAIP2BQ9ULR5 123 aaKnown RBP1.06□□□□□ -2.24
CPNE3-204ENST00000517862 EFCAB10A6NFE3 127 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 FAM25AB3EWG3 89 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 FAM25CB3EWG5 89 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 FAM25GB3EWG6 89 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 MT1EP04732 61 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 S100A10P60903 97 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 SPATA45Q537H7 98 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 MT1MQ8N339 61 aa1.05□□□□□ -2.24
CPNE3-204ENST00000517862 NCR2O95944 276 aa1.04□□□□□ -2.24
CPNE3-204ENST00000517862 CFDP00746 253 aaPredicted RBP1.04□□□□□ -2.24
CPNE3-204ENST00000517862 FAM74A4Q5TZK3 123 aa1.04□□□□□ -2.24
CPNE3-204ENST00000517862 Q6ZUT4 128 aa1.04□□□□□ -2.24
CPNE3-204ENST00000517862 PDCD10Q9BUL8 212 aa1.04□□□□□ -2.24
CPNE3-204ENST00000517862 J3QLW9 94 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 PYYP10082 97 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 PDE6GP18545 87 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 Q6AWC8 147 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 LINC00299Q6ZSB3 139 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 PSMG3Q9BT73 122 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-204ENST00000517862 SAR1AQ9NR31 198 aa1.03□□□□□ -2.24
CPNE3-204ENST00000517862 MRPL35Q9NZE8 188 aaKnown RBP1.03□□□□□ -2.24
CPNE3-204ENST00000517862 TRBV6-1A0A0K0K1D8 114 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 LOC100130705A0A1B0GUX0 176 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 LOC101927531A0A1B0GV80 90 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 LINC00587B1AMM8 73 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 M0R3E3 92 aa1.02□□□□□ -2.25
CPNE3-204ENST00000517862 SLC25A6P12236 298 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms