RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 APOC2P02655 101 aa-5.69□□□□□ -3.32
SNORA40.13-201ENST00000516379 DPH3P1Q9H4G8 78 aa-5.69□□□□□ -3.32
SNORA40.13-201ENST00000516379 OOSP1A8MZH6 123 aa-5.7□□□□□ -3.32
SNORA40.13-201ENST00000516379 CHD1O14646 1710 aa-5.71□□□□□ -3.32
SNORA40.13-201ENST00000516379 LCE6AA0A183 80 aa-5.71□□□□□ -3.32
SNORA40.13-201ENST00000516379 CRYM-AS1A6NIL9 109 aa-5.71□□□□□ -3.32
SNORA40.13-201ENST00000516379 TSTD1Q8NFU3 115 aa-5.71□□□□□ -3.32
SNORA40.13-201ENST00000516379 TRBV25-1A0A075B6N4 114 aa-5.72□□□□□ -3.33
SNORA40.13-201ENST00000516379 ATP5EP56381 51 aaPredicted RBP-5.72□□□□□ -3.33
SNORA40.13-201ENST00000516379 DR1Q01658 176 aa-5.72□□□□□ -3.33
SNORA40.13-201ENST00000516379 POLR1AO95602 1720 aaPredicted RBP-5.72□□□□□ -3.33
SNORA40.13-201ENST00000516379 NBEAP1P0C6P0 100 aa-5.73□□□□□ -3.33
SNORA40.13-201ENST00000516379 CKS1BP61024 79 aa-5.73□□□□□ -3.33
SNORA40.13-201ENST00000516379 GAFA1Q96PS6 74 aa-5.74□□□□□ -3.33
SNORA40.13-201ENST00000516379 TMEM131LA2VDJ0 1609 aa-5.74□□□□□ -3.33
SNORA40.13-201ENST00000516379 TMEM218A2RU14 115 aa-5.75□□□□□ -3.33
SNORA40.13-201ENST00000516379 A8MTW9 85 aa-5.75□□□□□ -3.33
SNORA40.13-201ENST00000516379 WDFY4Q6ZS81 3184 aa-5.75□□□□□ -3.33
SNORA40.13-201ENST00000516379 ANKRD36BQ8N2N9 1353 aa-5.76□□□□□ -3.33
SNORA40.13-201ENST00000516379 MEIG1Q5JSS6 88 aa-5.76□□□□□ -3.33
SNORA40.13-201ENST00000516379 A0A1B0GUL6 1792 aa-5.76□□□□□ -3.33
SNORA40.13-201ENST00000516379 LEPROTL1O95214 131 aa-5.77□□□□□ -3.33
SNORA40.13-201ENST00000516379 PMCHL1Q16048 86 aa-5.77□□□□□ -3.33
SNORA40.13-201ENST00000516379 CACFD1Q9UGQ2 172 aa-5.77□□□□□ -3.33
SNORA40.13-201ENST00000516379 FOCADQ5VW36 1801 aa-5.77□□□□□ -3.33
SNORA40.13-201ENST00000516379 DOT1LQ8TEK3 1739 aa-5.77□□□□□ -3.33
SNORA40.13-201ENST00000516379 ABCC2Q92887 1545 aa-5.78□□□□□ -3.33
SNORA40.13-201ENST00000516379 NOP10Q9NPE3 64 aaKnown RBP-5.78□□□□□ -3.33
SNORA40.13-201ENST00000516379 BAZ1AQ9NRL2 1556 aaPredicted RBP-5.78□□□□□ -3.33
SNORA40.13-201ENST00000516379 SPART-AS1P0CW21 52 aa-5.79□□□□□ -3.34
SNORA40.13-201ENST00000516379 CC2D2AQ9P2K1 1620 aa-5.79□□□□□ -3.34
SNORA40.13-201ENST00000516379 KIF1AQ12756 1690 aa-5.79□□□□□ -3.34
SNORA40.13-201ENST00000516379 PLCH1Q4KWH8 1693 aa-5.79□□□□□ -3.34
SNORA40.13-201ENST00000516379 MUC3AQ02505 3323 aa-5.79□□□□□ -3.34
SNORA40.13-201ENST00000516379 MT-ATP8P03928 68 aa-5.8□□□□□ -3.34
SNORA40.13-201ENST00000516379 M0QZ58 72 aa-5.81□□□□□ -3.34
SNORA40.13-201ENST00000516379 DEFB136Q30KP8 78 aa-5.81□□□□□ -3.34
SNORA40.13-201ENST00000516379 PFDN5Q99471 154 aa-5.81□□□□□ -3.34
SNORA40.13-201ENST00000516379 D6R8Y8 96 aa-5.82□□□□□ -3.34
SNORA40.13-201ENST00000516379 ALKAL2Q6UX46 152 aa-5.82□□□□□ -3.34
SNORA40.13-201ENST00000516379 MUSTN1Q8IVN3 82 aa-5.82□□□□□ -3.34
SNORA40.13-201ENST00000516379 LTN1O94822 1766 aa-5.83□□□□□ -3.34
SNORA40.13-201ENST00000516379 FABP1P07148 127 aa-5.83□□□□□ -3.34
SNORA40.13-201ENST00000516379 DDX60LQ5H9U9 1706 aaKnown RBP-5.84□□□□□ -3.34
SNORA40.13-201ENST00000516379 ARPC4P59998 168 aa-5.84□□□□□ -3.34
SNORA40.13-201ENST00000516379 DCHS1Q96JQ0 3298 aa-5.84□□□□□ -3.34
SNORA40.13-201ENST00000516379 IQCF6A8MYZ5 107 aa-5.85□□□□□ -3.35
SNORA40.13-201ENST00000516379 FAM24AA6NFZ4 105 aa-5.86□□□□□ -3.35
SNORA40.13-201ENST00000516379 ZNF436-AS1Q8NC38 126 aaPredicted RBP-5.86□□□□□ -3.35
SNORA40.13-201ENST00000516379 NRXN1Q9ULB1 1477 aa-5.87□□□□□ -3.35
SNORA40.13-201ENST00000516379 SMIM15Q7Z3B0 74 aa-5.87□□□□□ -3.35
SNORA40.13-201ENST00000516379 DNMBPQ6XZF7 1577 aa-5.88□□□□□ -3.35
SNORA40.13-201ENST00000516379 RAPGEF2Q9Y4G8 1499 aa-5.88□□□□□ -3.35
SNORA40.13-201ENST00000516379 KTN1Q86UP2 1357 aaKnown RBP-5.88□□□□□ -3.35
SNORA40.13-201ENST00000516379 HMGN3Q15651 99 aa-5.88□□□□□ -3.35
SNORA40.13-201ENST00000516379 EP400Q96L91 3159 aa-5.89□□□□□ -3.35
SNORA40.13-201ENST00000516379 S100PP25815 95 aa-5.89□□□□□ -3.35
SNORA40.13-201ENST00000516379 KRTDAPP60985 99 aa-5.89□□□□□ -3.35
SNORA40.13-201ENST00000516379 ITSN1Q15811 1721 aa-5.89□□□□□ -3.35
SNORA40.13-201ENST00000516379 ARHGAP5Q13017 1502 aa-5.89□□□□□ -3.35
SNORA40.13-201ENST00000516379 MLH3Q9UHC1 1453 aa-5.9□□□□□ -3.35
SNORA40.13-201ENST00000516379 ACYP1P07311 99 aa-5.9□□□□□ -3.35
SNORA40.13-201ENST00000516379 UQCRHP07919 91 aa-5.9□□□□□ -3.35
SNORA40.13-201ENST00000516379 RPS27P42677 84 aaKnown RBP-5.9□□□□□ -3.35
SNORA40.13-201ENST00000516379 RPS27LQ71UM5 84 aaKnown RBP-5.9□□□□□ -3.35
SNORA40.13-201ENST00000516379 ZC3H13Q5T200 1668 aaKnown RBP-5.91□□□□□ -3.36
SNORA40.13-201ENST00000516379 KIAA0586Q9BVV6 1533 aa-5.91□□□□□ -3.36
SNORA40.13-201ENST00000516379 DNAH14Q0VDD8 3507 aa-5.91□□□□□ -3.36
SNORA40.13-201ENST00000516379 M0QY20 66 aa-5.92□□□□□ -3.36
SNORA40.13-201ENST00000516379 LRRIQ1Q96JM4 1722 aa-5.92□□□□□ -3.36
SNORA40.13-201ENST00000516379 hADV29S1A0JD25 119 aa-5.93□□□□□ -3.36
SNORA40.13-201ENST00000516379 MPC2O95563 127 aa-5.93□□□□□ -3.36
SNORA40.13-201ENST00000516379 A0A1B0GUT8 65 aa-5.94□□□□□ -3.36
SNORA40.13-201ENST00000516379 CEP250Q9BV73 2442 aa-5.94□□□□□ -3.36
SNORA40.13-201ENST00000516379 BVES-AS1Q5T3Y7 98 aa-5.95□□□□□ -3.36
SNORA40.13-201ENST00000516379 PLIN4Q96Q06 1357 aa-5.95□□□□□ -3.36
SNORA40.13-201ENST00000516379 ERVK-7P63135 1459 aa-5.96□□□□□ -3.36
SNORA40.13-201ENST00000516379 TRAV21A0A0B4J279 112 aa-5.96□□□□□ -3.36
SNORA40.13-201ENST00000516379 H3BUA1 57 aa-5.96□□□□□ -3.36
SNORA40.13-201ENST00000516379 ETDBQ3ZM63 59 aa-5.96□□□□□ -3.36
SNORA40.13-201ENST00000516379 ATP10BO94823 1461 aa-5.96□□□□□ -3.36
SNORA40.13-201ENST00000516379 LEAP2Q969E1 77 aa-5.97□□□□□ -3.37
SNORA40.13-201ENST00000516379 GNG14A0A1W2PPG7 69 aa-5.98□□□□□ -3.37
SNORA40.13-201ENST00000516379 PAIP2BQ9ULR5 123 aaKnown RBP-5.98□□□□□ -3.37
SNORA40.13-201ENST00000516379 NAIPQ13075 1403 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 ABCA3Q99758 1704 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 FAM25AB3EWG3 89 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 FAM25CB3EWG5 89 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 FAM25GB3EWG6 89 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 H3BQ15 152 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 NDUFC1O43677 76 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 CCDC58Q4VC31 144 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 THOC2Q8NI27 1593 aaKnown RBP-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 SPHKAPQ2M3C7 1700 aa-5.99□□□□□ -3.37
SNORA40.13-201ENST00000516379 DIP2BQ9P265 1576 aa-6.01□□□□□ -3.37
SNORA40.13-201ENST00000516379 MKI67P46013 3256 aaKnown RBP-6.01□□□□□ -3.37
SNORA40.13-201ENST00000516379 LZICQ8WZA0 190 aa-6.04□□□□□ -3.38
SNORA40.13-201ENST00000516379 LINC00470Q9BZP3 86 aa-6.04□□□□□ -3.38
SNORA40.13-201ENST00000516379 GNG7O60262 68 aa-6.07□□□□□ -3.38
SNORA40.13-201ENST00000516379 SELENOWP63302 87 aa-6.07□□□□□ -3.38
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms