RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 PSCAO43653 123 aa10.6□□□□□ -0.71
TSPAN17-209ENST00000515708 ZCCHC13Q8WW36 166 aaKnown RBP10.6□□□□□ -0.71
TSPAN17-209ENST00000515708 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
TSPAN17-209ENST00000515708 CD164Q04900 197 aa10.59□□□□□ -0.71
TSPAN17-209ENST00000515708 C16orf90A8MZG2 172 aa10.58□□□□□ -0.72
TSPAN17-209ENST00000515708 IGLV8-61A0A075B6I0 122 aa10.57□□□□□ -0.72
TSPAN17-209ENST00000515708 HUWE1Q7Z6Z7 4374 aaKnown RBP10.57□□□□□ -0.72
TSPAN17-209ENST00000515708 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
TSPAN17-209ENST00000515708 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.56□□□□□ -0.72
TSPAN17-209ENST00000515708 Q1T7F1 81 aa10.56□□□□□ -0.72
TSPAN17-209ENST00000515708 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
TSPAN17-209ENST00000515708 A0A087WSZ3 146 aa10.55□□□□□ -0.72
TSPAN17-209ENST00000515708 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
TSPAN17-209ENST00000515708 DNAH10Q8IVF4 4471 aa10.55□□□□□ -0.72
TSPAN17-209ENST00000515708 hDV103S1A0JD37 113 aa10.53□□□□□ -0.72
TSPAN17-209ENST00000515708 K7EIL1 84 aa10.52□□□□□ -0.73
TSPAN17-209ENST00000515708 LYSTQ99698 3801 aa10.51□□□□□ -0.73
TSPAN17-209ENST00000515708 WFDC13Q8IUB5 93 aa10.51□□□□□ -0.73
TSPAN17-209ENST00000515708 UBE2AP49459 152 aa10.5□□□□□ -0.73
TSPAN17-209ENST00000515708 C1orf64Q8NEQ6 169 aa10.5□□□□□ -0.73
TSPAN17-209ENST00000515708 KRTAP11-1Q8IUC1 163 aa10.48□□□□□ -0.73
TSPAN17-209ENST00000515708 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
TSPAN17-209ENST00000515708 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
TSPAN17-209ENST00000515708 MDFIQ99750 246 aa10.47□□□□□ -0.73
TSPAN17-209ENST00000515708 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
TSPAN17-209ENST00000515708 PHF5AQ7RTV0 110 aaKnown RBP10.46□□□□□ -0.73
TSPAN17-209ENST00000515708 COL7A1Q02388 2944 aa10.46□□□□□ -0.73
TSPAN17-209ENST00000515708 STAB2Q8WWQ8 2551 aa10.45□□□□□ -0.74
TSPAN17-209ENST00000515708 DNAH9Q9NYC9 4486 aa10.45□□□□□ -0.74
TSPAN17-209ENST00000515708 LRCOL1A6NCL2 159 aa10.45□□□□□ -0.74
TSPAN17-209ENST00000515708 KRTAP29-1A8MX34 341 aaPredicted RBP10.45□□□□□ -0.74
TSPAN17-209ENST00000515708 SPRR1BP22528 89 aa10.44□□□□□ -0.74
TSPAN17-209ENST00000515708 H0Y9J4 135 aa10.44□□□□□ -0.74
TSPAN17-209ENST00000515708 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
TSPAN17-209ENST00000515708 PSPHP1O15172 72 aa10.43□□□□□ -0.74
TSPAN17-209ENST00000515708 MP68P56378 58 aa10.43□□□□□ -0.74
TSPAN17-209ENST00000515708 NDUFB1O75438 58 aa10.43□□□□□ -0.74
TSPAN17-209ENST00000515708 TRAV22A0A0B4J277 110 aa10.42□□□□□ -0.74
TSPAN17-209ENST00000515708 PRR4Q16378 134 aa10.42□□□□□ -0.74
TSPAN17-209ENST00000515708 C14orf177Q52M58 125 aa10.41□□□□□ -0.74
TSPAN17-209ENST00000515708 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
TSPAN17-209ENST00000515708 CASC2Q6XLA1 102 aa10.39□□□□□ -0.75
TSPAN17-209ENST00000515708 LINC00208Q96KT6 92 aa10.39□□□□□ -0.75
TSPAN17-209ENST00000515708 LINC00472Q9H8W2 130 aa10.39□□□□□ -0.75
TSPAN17-209ENST00000515708 A8MWP4 228 aa10.38□□□□□ -0.75
TSPAN17-209ENST00000515708 C9orf163Q8N9P6 203 aa10.36□□□□□ -0.75
TSPAN17-209ENST00000515708 APLNQ9ULZ1 77 aa10.36□□□□□ -0.75
TSPAN17-209ENST00000515708 H0Y9P7 68 aa10.34□□□□□ -0.75
TSPAN17-209ENST00000515708 B9D2Q9BPU9 175 aa10.34□□□□□ -0.75
TSPAN17-209ENST00000515708 CSMD3Q7Z407 3707 aa10.34□□□□□ -0.75
TSPAN17-209ENST00000515708 KTN1-AS1Q86SY8 53 aa10.33□□□□□ -0.76
TSPAN17-209ENST00000515708 TENM2Q9NT68 2774 aa10.33□□□□□ -0.76
TSPAN17-209ENST00000515708 H3BPC8 53 aa10.32□□□□□ -0.76
TSPAN17-209ENST00000515708 DNHD1Q96M86 4753 aa10.31□□□□□ -0.76
TSPAN17-209ENST00000515708 A8MUN3 132 aa10.31□□□□□ -0.76
TSPAN17-209ENST00000515708 RBM12B-AS1Q9P1G2 102 aa10.31□□□□□ -0.76
TSPAN17-209ENST00000515708 PANO1I0J062 215 aa10.3□□□□□ -0.76
TSPAN17-209ENST00000515708 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
TSPAN17-209ENST00000515708 DNAH7Q8WXX0 4024 aa10.3□□□□□ -0.76
TSPAN17-209ENST00000515708 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
TSPAN17-209ENST00000515708 PRKDCP78527 4128 aaKnown RBP10.28□□□□□ -0.76
TSPAN17-209ENST00000515708 MMP24-AS1A0A0U1RRL7 71 aa10.28□□□□□ -0.76
TSPAN17-209ENST00000515708 A8MU10 97 aa10.26□□□□□ -0.77
TSPAN17-209ENST00000515708 Q5VV11 94 aa10.26□□□□□ -0.77
TSPAN17-209ENST00000515708 DYNC2H1Q8NCM8 4307 aaKnown RBP10.25□□□□□ -0.77
TSPAN17-209ENST00000515708 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
TSPAN17-209ENST00000515708 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
TSPAN17-209ENST00000515708 IGLV9-49A0A0B4J1Y8 123 aa10.22□□□□□ -0.77
TSPAN17-209ENST00000515708 Q96NJ1 140 aa10.22□□□□□ -0.77
TSPAN17-209ENST00000515708 CHKB-CPT1BH3BT56 60 aa10.2□□□□□ -0.78
TSPAN17-209ENST00000515708 NDUFS5O43920 106 aa10.2□□□□□ -0.78
TSPAN17-209ENST00000515708 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.2□□□□□ -0.78
TSPAN17-209ENST00000515708 PLECQ15149 4684 aaKnown RBP10.2□□□□□ -0.78
TSPAN17-209ENST00000515708 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
TSPAN17-209ENST00000515708 ATP11AUNQ6ZP68 121 aa10.18□□□□□ -0.78
TSPAN17-209ENST00000515708 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
TSPAN17-209ENST00000515708 LIMD2Q9BT23 127 aa10.18□□□□□ -0.78
TSPAN17-209ENST00000515708 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
TSPAN17-209ENST00000515708 MEGF8Q7Z7M0 2845 aa10.16□□□□□ -0.78
TSPAN17-209ENST00000515708 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
TSPAN17-209ENST00000515708 MOBPQ13875 183 aa10.15□□□□□ -0.78
TSPAN17-209ENST00000515708 Q8N9P0 234 aaPredicted RBP10.14□□□□□ -0.79
TSPAN17-209ENST00000515708 TP53AIP1Q9HCN2 124 aa10.14□□□□□ -0.79
TSPAN17-209ENST00000515708 STARD9Q9P2P6 4700 aa10.13□□□□□ -0.79
TSPAN17-209ENST00000515708 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
TSPAN17-209ENST00000515708 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
TSPAN17-209ENST00000515708 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
TSPAN17-209ENST00000515708 A6NN06 94 aa10.1□□□□□ -0.79
TSPAN17-209ENST00000515708 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
TSPAN17-209ENST00000515708 WWC2-AS2Q96NR7 200 aa10.1□□□□□ -0.79
TSPAN17-209ENST00000515708 PRR15LQ9BU68 103 aa10.1□□□□□ -0.79
TSPAN17-209ENST00000515708 PCOTHQ58A44 107 aa10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 LCA10Q71F78 164 aa10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 ZNF706Q9Y5V0 76 aaPredicted RBP10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 A0A1B0GVX0 72 aa10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 Q6ZR54 194 aa10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 COA5Q86WW8 74 aa10.09□□□□□ -0.79
TSPAN17-209ENST00000515708 IGHV6-1A0A0B4J1U7 121 aa10.08□□□□□ -0.8
TSPAN17-209ENST00000515708 A0A087WTM6 91 aa10.07□□□□□ -0.8
TSPAN17-209ENST00000515708 Q75L30 129 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms