RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 C3orf85A0A1B0GTC6 90 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 FAM236AA0A1B0GUQ0 79 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 FAM236BA0A1B0GV22 79 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 TMEM218A2RU14 115 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 IFITM5A6NNB3 132 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 FOXA3P55318 350 aaPredicted RBP0.77□□□□□ -2.29
LINC01088-211ENST00000515597 MEIG1Q5JSS6 88 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 C12orf73Q69YU5 71 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 TEX261Q6UWH6 196 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 Q6ZQT0 140 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 ZNF818PQ6ZRF7 136 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 Q6ZUT4 128 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 ARPINQ7Z6K5 226 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 TEN1Q86WV5 123 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 SNX29P2Q8IUI4 249 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 SVBPQ8N300 66 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 ACBD7Q8N6N7 88 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 C14orf144Q96I85 54 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 ZFP30Q9Y2G7 519 aa0.77□□□□□ -2.29
LINC01088-211ENST00000515597 TRBV6-4A0A1B0GX49 114 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 M0R143 59 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 M0R2P5 195 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 SNCGO76070 127 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 CD3DP04234 171 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 CD2P06729 351 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 SLC25A4P12235 298 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 SMIM11AP58511 58 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 GNG2P59768 71 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 CFAP126Q5VTH2 177 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 MRPL54Q6P161 138 aaKnown RBP0.76□□□□□ -2.29
LINC01088-211ENST00000515597 LINC00269Q8N2A0 174 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 SFT2D1Q8WV19 159 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 OBSCN-AS1Q96MR7 158 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 AGPAT4-IT1Q9H0P7 198 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 SCN3BQ9NY72 215 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 FKBP11Q9NYL4 201 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 LSM2Q9Y333 95 aaKnown RBP0.76□□□□□ -2.29
LINC01088-211ENST00000515597 AP4S1Q9Y587 144 aa0.76□□□□□ -2.29
LINC01088-211ENST00000515597 TRAV30A0A087WSZ9 112 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 TRAV12-1A0A0B4J245 112 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 LOC107984156A0A0G2JMH3 177 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 C9orf92A6NGG3 77 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 H3BQ15 152 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 M0R3E3 92 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 IL5P05113 134 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ADCYAP1P18509 176 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ROMO1P60602 79 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 NPC2P61916 151 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 PKIAP61925 76 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 Q0VG73 95 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 FAM74A1Q5RGS3 127 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 C9orf153Q5TBE3 101 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 SPANXN1Q5VSR9 72 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 Q6AWC8 147 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 RPL7L1Q6DKI1 246 aaKnown RBP0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ATP11AUNQ6ZP68 121 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 KRTAP8-1Q8IUC2 63 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ARL17AQ8IVW1 177 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 ODF3Q96PU9 254 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 SEC11CQ9BY50 192 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 Q9H521 79 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 SERP1Q9Y6X1 66 aa0.75□□□□□ -2.29
LINC01088-211ENST00000515597 A0A087WSZ3 146 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 GVQW2A0A096LPI5 108 aaPredicted RBP0.74□□□□□ -2.29
LINC01088-211ENST00000515597 H3BRM9 83 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 CCDC179H3BU77 68 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 NDUFB6O95139 128 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 IFITM1P13164 125 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 COX7CP15954 63 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 S100A10P60903 97 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 HSD52Q0P140 79 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 CATR1Q13166 79 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 KRTAP19-8Q3LI54 63 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 COL5A1-AS1Q5SY13 56 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 LINC00299Q6ZSB3 139 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 OR10AG1Q8NH19 301 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 PPDPFLQ8WWR9 84 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 AQP10Q96PS8 301 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 S100A13Q99584 98 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 TMEM242Q9NWH2 141 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 ORMDL1Q9P0S3 153 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 SNURFQ9Y675 71 aa0.74□□□□□ -2.29
LINC01088-211ENST00000515597 A0A0G2JND7 137 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 LOC100130705A0A1B0GUX0 176 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 RBAKDNA6NC62 111 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 F8W1H4 67 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 PPYP01298 95 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 UBE2D3P61077 147 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
LINC01088-211ENST00000515597 UBE2D2P62837 147 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 PDE6HQ13956 83 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 RHOHQ15669 191 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 MIC13Q5XKP0 118 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 FAM19A2Q8N3H0 131 aa0.73□□□□□ -2.29
LINC01088-211ENST00000515597 TRBV6-8A0A0A6YYG3 113 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 TRBV10-1A0A0K0K1A3 114 aa0.72□□□□□ -2.29
LINC01088-211ENST00000515597 TRBV10-3A0A0K0K1G6 114 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms