RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 H0Y9J4 135 aa8.03□□□□□ -1.12
PDLIM3-210ENST00000514308 TMEM256-PLSCR3K7ERE1 68 aa8.03□□□□□ -1.12
PDLIM3-210ENST00000514308 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
PDLIM3-210ENST00000514308 FAM240AA0A1B0GVK7 77 aa8.02□□□□□ -1.13
PDLIM3-210ENST00000514308 MRPL55Q7Z7F7 128 aaKnown RBP8.02□□□□□ -1.13
PDLIM3-210ENST00000514308 OBSCN-AS1Q96MR7 158 aa8.02□□□□□ -1.13
PDLIM3-210ENST00000514308 TNXBP22105 4242 aa8.02□□□□□ -1.13
PDLIM3-210ENST00000514308 ACYP1P07311 99 aa8.01□□□□□ -1.13
PDLIM3-210ENST00000514308 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
PDLIM3-210ENST00000514308 JMJD7-PLA2G4BH0Y9G9 81 aa8□□□□□ -1.13
PDLIM3-210ENST00000514308 PRYO14603 147 aa8□□□□□ -1.13
PDLIM3-210ENST00000514308 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
PDLIM3-210ENST00000514308 SIGMAR1Q99720 223 aa7.99□□□□□ -1.13
PDLIM3-210ENST00000514308 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
PDLIM3-210ENST00000514308 ZNF861PO60384 105 aa7.98□□□□□ -1.13
PDLIM3-210ENST00000514308 SPRR1AP35321 89 aa7.98□□□□□ -1.13
PDLIM3-210ENST00000514308 PRR26Q8N8Z3 221 aa7.97□□□□□ -1.13
PDLIM3-210ENST00000514308 RPL37AP8A6NKH3 93 aa7.96□□□□□ -1.14
PDLIM3-210ENST00000514308 BCE1O60756 84 aa7.96□□□□□ -1.14
PDLIM3-210ENST00000514308 KRTAP4-16G5E9R7 235 aaPredicted RBP7.95□□□□□ -1.14
PDLIM3-210ENST00000514308 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
PDLIM3-210ENST00000514308 Q6ZQY7 126 aa7.94□□□□□ -1.14
PDLIM3-210ENST00000514308 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
PDLIM3-210ENST00000514308 B5MCH6 92 aa7.93□□□□□ -1.14
PDLIM3-210ENST00000514308 ETDCA0A1B0GVM5 59 aa7.92□□□□□ -1.14
PDLIM3-210ENST00000514308 Q6ZRX8 168 aa7.92□□□□□ -1.14
PDLIM3-210ENST00000514308 C21orf62-AS1Q17RA5 79 aa7.91□□□□□ -1.14
PDLIM3-210ENST00000514308 CCKP06307 115 aa7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 SCGB1A1P11684 91 aa7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 PDE6GP18545 87 aa7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 UBE2AP49459 152 aa7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 C14orf132Q9NPU4 83 aa7.9□□□□□ -1.14
PDLIM3-210ENST00000514308 UBR4Q5T4S7 5183 aa7.89□□□□□ -1.15
PDLIM3-210ENST00000514308 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
PDLIM3-210ENST00000514308 LOC110117498A0A087WWA1 95 aa7.88□□□□□ -1.15
PDLIM3-210ENST00000514308 GAGE2AQ6NT46 116 aa7.88□□□□□ -1.15
PDLIM3-210ENST00000514308 MT-ATP8P03928 68 aa7.86□□□□□ -1.15
PDLIM3-210ENST00000514308 NDUFV3P56181 108 aaKnown RBP7.86□□□□□ -1.15
PDLIM3-210ENST00000514308 LINC00643Q86TS7 51 aa7.86□□□□□ -1.15
PDLIM3-210ENST00000514308 CRYGAP11844 174 aa7.85□□□□□ -1.15
PDLIM3-210ENST00000514308 KRTAP13-1Q8IUC0 172 aa7.85□□□□□ -1.15
PDLIM3-210ENST00000514308 DSCR8Q96T75 97 aa7.85□□□□□ -1.15
PDLIM3-210ENST00000514308 Q9BRP9 147 aa7.85□□□□□ -1.15
PDLIM3-210ENST00000514308 LRP2P98164 4655 aa7.85□□□□□ -1.15
PDLIM3-210ENST00000514308 IGLV5-48A0A075B6I7 105 aa7.84□□□□□ -1.15
PDLIM3-210ENST00000514308 Q6Q795 121 aa7.84□□□□□ -1.15
PDLIM3-210ENST00000514308 Q6ZQT0 140 aa7.84□□□□□ -1.15
PDLIM3-210ENST00000514308 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
PDLIM3-210ENST00000514308 PRLHP81277 87 aa7.83□□□□□ -1.16
PDLIM3-210ENST00000514308 A0A087X002 238 aa7.82□□□□□ -1.16
PDLIM3-210ENST00000514308 TRBV7-4A0A0J9YYF1 115 aa7.82□□□□□ -1.16
PDLIM3-210ENST00000514308 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
PDLIM3-210ENST00000514308 Q8N377 158 aa7.82□□□□□ -1.16
PDLIM3-210ENST00000514308 TYMSOSQ8TAI1 123 aa7.81□□□□□ -1.16
PDLIM3-210ENST00000514308 IMUPQ9GZP8 106 aa7.81□□□□□ -1.16
PDLIM3-210ENST00000514308 PCP4P48539 62 aa7.8□□□□□ -1.16
PDLIM3-210ENST00000514308 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
PDLIM3-210ENST00000514308 SMCR5Q8TEV8 140 aa7.8□□□□□ -1.16
PDLIM3-210ENST00000514308 LINC00846Q9NV44 126 aa7.8□□□□□ -1.16
PDLIM3-210ENST00000514308 TRBV7-7A0A0K0K1E9 115 aa7.79□□□□□ -1.16
PDLIM3-210ENST00000514308 ANAPC11Q9NYG5 84 aa7.79□□□□□ -1.16
PDLIM3-210ENST00000514308 A0A1B0GV72 72 aa7.78□□□□□ -1.16
PDLIM3-210ENST00000514308 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
PDLIM3-210ENST00000514308 HIGD2AQ9BW72 106 aa7.78□□□□□ -1.16
PDLIM3-210ENST00000514308 ERC2-IT1O76042 136 aa7.77□□□□□ -1.17
PDLIM3-210ENST00000514308 Q6JHZ5 121 aa7.77□□□□□ -1.17
PDLIM3-210ENST00000514308 A0A1B0GW54 56 aa7.76□□□□□ -1.17
PDLIM3-210ENST00000514308 PRR4Q16378 134 aa7.76□□□□□ -1.17
PDLIM3-210ENST00000514308 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
PDLIM3-210ENST00000514308 UBL5Q9BZL1 73 aa7.75□□□□□ -1.17
PDLIM3-210ENST00000514308 SPRR1BP22528 89 aa7.74□□□□□ -1.17
PDLIM3-210ENST00000514308 KRTAP13-2Q52LG2 175 aa7.74□□□□□ -1.17
PDLIM3-210ENST00000514308 ATP5EP2Q5VTU8 51 aa7.74□□□□□ -1.17
PDLIM3-210ENST00000514308 XP32Q5T750 250 aa7.73□□□□□ -1.17
PDLIM3-210ENST00000514308 ZNF706Q9Y5V0 76 aaPredicted RBP7.73□□□□□ -1.17
PDLIM3-210ENST00000514308 SMIM29Q86T20 159 aa7.72□□□□□ -1.17
PDLIM3-210ENST00000514308 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
PDLIM3-210ENST00000514308 SPRR4Q96PI1 79 aa7.71□□□□□ -1.18
PDLIM3-210ENST00000514308 IGLV8-61A0A075B6I0 122 aa7.7□□□□□ -1.18
PDLIM3-210ENST00000514308 F8WEM9 126 aa7.7□□□□□ -1.18
PDLIM3-210ENST00000514308 LPAP08519 4548 aa7.69□□□□□ -1.18
PDLIM3-210ENST00000514308 Q6ZVQ6 151 aa7.67□□□□□ -1.18
PDLIM3-210ENST00000514308 C3orf22Q8N5N4 141 aa7.67□□□□□ -1.18
PDLIM3-210ENST00000514308 IGKV3D-7A0A0C4DH55 119 aa7.66□□□□□ -1.18
PDLIM3-210ENST00000514308 Q8NBF4 154 aa7.66□□□□□ -1.18
PDLIM3-210ENST00000514308 RNF213Q63HN8 5207 aa7.66□□□□□ -1.18
PDLIM3-210ENST00000514308 CXCL6P80162 114 aa7.65□□□□□ -1.18
PDLIM3-210ENST00000514308 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
PDLIM3-210ENST00000514308 A0A1W2PNM2 257 aa7.64□□□□□ -1.19
PDLIM3-210ENST00000514308 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
PDLIM3-210ENST00000514308 RETNLBQ9BQ08 111 aa7.63□□□□□ -1.19
PDLIM3-210ENST00000514308 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
PDLIM3-210ENST00000514308 NREPQ16612 68 aa7.62□□□□□ -1.19
PDLIM3-210ENST00000514308 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
PDLIM3-210ENST00000514308 IGFL1Q6UW32 110 aa7.61□□□□□ -1.19
PDLIM3-210ENST00000514308 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
PDLIM3-210ENST00000514308 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
PDLIM3-210ENST00000514308 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.19
PDLIM3-210ENST00000514308 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms