RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 HIST1H4GQ99525 98 aa4.8□□□□□ -1.64
NEDD4-210ENST00000513957 NHP2Q9NX24 153 aaKnown RBP4.8□□□□□ -1.64
NEDD4-210ENST00000513957 HMCN2Q8NDA2 5059 aa4.79□□□□□ -1.64
NEDD4-210ENST00000513957 KRTAP9-7A8MTY7 169 aa4.79□□□□□ -1.64
NEDD4-210ENST00000513957 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
NEDD4-210ENST00000513957 ERC2-IT1O76042 136 aa4.78□□□□□ -1.64
NEDD4-210ENST00000513957 SPRR1BP22528 89 aa4.78□□□□□ -1.64
NEDD4-210ENST00000513957 TAL2Q16559 108 aa4.78□□□□□ -1.64
NEDD4-210ENST00000513957 PYY3Q5JQD4 70 aa4.78□□□□□ -1.64
NEDD4-210ENST00000513957 SSBP3-AS1Q7Z2R9 100 aa4.77□□□□□ -1.65
NEDD4-210ENST00000513957 C14orf144Q96I85 54 aa4.77□□□□□ -1.65
NEDD4-210ENST00000513957 SPINK1P00995 79 aa4.76□□□□□ -1.65
NEDD4-210ENST00000513957 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
NEDD4-210ENST00000513957 BVES-AS1Q5T3Y7 98 aa4.76□□□□□ -1.65
NEDD4-210ENST00000513957 C3orf22Q8N5N4 141 aa4.76□□□□□ -1.65
NEDD4-210ENST00000513957 SMIM11BQ8TCY0 68 aa4.76□□□□□ -1.65
NEDD4-210ENST00000513957 A0A0B4J2C4 111 aa4.75□□□□□ -1.65
NEDD4-210ENST00000513957 SLC25A20O43772 301 aa4.75□□□□□ -1.65
NEDD4-210ENST00000513957 C2orf91Q6ZV80 131 aa4.75□□□□□ -1.65
NEDD4-210ENST00000513957 Q8NBF4 154 aa4.75□□□□□ -1.65
NEDD4-210ENST00000513957 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
NEDD4-210ENST00000513957 IGLV5-48A0A075B6I7 105 aa4.74□□□□□ -1.65
NEDD4-210ENST00000513957 TEX49A0A1B0GTD5 131 aa4.74□□□□□ -1.65
NEDD4-210ENST00000513957 MOBPQ13875 183 aa4.74□□□□□ -1.65
NEDD4-210ENST00000513957 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
NEDD4-210ENST00000513957 CEND1Q8N111 149 aa4.73□□□□□ -1.65
NEDD4-210ENST00000513957 ST20-AS1Q8NBB2 130 aa4.73□□□□□ -1.65
NEDD4-210ENST00000513957 RAB37Q96AX2 223 aa4.73□□□□□ -1.65
NEDD4-210ENST00000513957 SNCGO76070 127 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 CFC1BP0CG36 223 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 CFC1P0CG37 223 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 HSD52Q0P140 79 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 LINC00575Q6W349 94 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 FP248Q71RG6 208 aaPredicted RBP4.72□□□□□ -1.65
NEDD4-210ENST00000513957 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 UQCR10Q9UDW1 63 aa4.72□□□□□ -1.65
NEDD4-210ENST00000513957 hADV29S1A0JD25 119 aa4.71□□□□□ -1.66
NEDD4-210ENST00000513957 PRR4Q16378 134 aa4.71□□□□□ -1.66
NEDD4-210ENST00000513957 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
NEDD4-210ENST00000513957 H0YGX0 51 aa4.7□□□□□ -1.66
NEDD4-210ENST00000513957 NDUFV3P56181 108 aaKnown RBP4.7□□□□□ -1.66
NEDD4-210ENST00000513957 CD164Q04900 197 aa4.7□□□□□ -1.66
NEDD4-210ENST00000513957 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.7□□□□□ -1.66
NEDD4-210ENST00000513957 C12orf57Q99622 126 aa4.7□□□□□ -1.66
NEDD4-210ENST00000513957 A0A1B0GX51 115 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 SMIM6P0DI80 62 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 LINC01547P58512 204 aaPredicted RBP4.69□□□□□ -1.66
NEDD4-210ENST00000513957 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 OCIAD2Q56VL3 154 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 LIMD2Q9BT23 127 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 PRO1854Q9UHT4 67 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 LRP2P98164 4655 aa4.69□□□□□ -1.66
NEDD4-210ENST00000513957 FXYD2P54710 66 aa4.68□□□□□ -1.66
NEDD4-210ENST00000513957 Q6ZQY7 126 aa4.68□□□□□ -1.66
NEDD4-210ENST00000513957 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
NEDD4-210ENST00000513957 PRO1933Q9H354 126 aa4.68□□□□□ -1.66
NEDD4-210ENST00000513957 F8WEM9 126 aa4.67□□□□□ -1.66
NEDD4-210ENST00000513957 Q1RN00 199 aa4.67□□□□□ -1.66
NEDD4-210ENST00000513957 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
NEDD4-210ENST00000513957 Q8N377 158 aa4.67□□□□□ -1.66
NEDD4-210ENST00000513957 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
NEDD4-210ENST00000513957 H7C2G1 150 aa4.66□□□□□ -1.66
NEDD4-210ENST00000513957 Q5XG85 94 aa4.66□□□□□ -1.66
NEDD4-210ENST00000513957 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 IGLV7-46A0A075B6I9 117 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 H3BQ85 93 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 COX6CP09669 75 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 Q6JHZ5 121 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 RETNLBQ9BQ08 111 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 LPAP08519 4548 aa4.65□□□□□ -1.67
NEDD4-210ENST00000513957 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
NEDD4-210ENST00000513957 M0R143 59 aa4.63□□□□□ -1.67
NEDD4-210ENST00000513957 TSTD3H0UI37 97 aa4.62□□□□□ -1.67
NEDD4-210ENST00000513957 CLEC2BQ92478 149 aa4.62□□□□□ -1.67
NEDD4-210ENST00000513957 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
NEDD4-210ENST00000513957 DNAL4O96015 105 aa4.61□□□□□ -1.67
NEDD4-210ENST00000513957 PSMB2P49721 201 aa4.61□□□□□ -1.67
NEDD4-210ENST00000513957 K7ERJ3 54 aa4.6□□□□□ -1.67
NEDD4-210ENST00000513957 TCL1BO95988 128 aa4.6□□□□□ -1.67
NEDD4-210ENST00000513957 KRTAP13-3Q3SY46 172 aa4.59□□□□□ -1.67
NEDD4-210ENST00000513957 ASB16-AS1Q495Z4 193 aa4.59□□□□□ -1.67
NEDD4-210ENST00000513957 HRCT1Q6UXD1 115 aa4.59□□□□□ -1.67
NEDD4-210ENST00000513957 TMEM256-PLSCR3K7ERE1 68 aa4.58□□□□□ -1.68
NEDD4-210ENST00000513957 TRACP01848 142 aa4.58□□□□□ -1.68
NEDD4-210ENST00000513957 Q6Q795 121 aa4.58□□□□□ -1.68
NEDD4-210ENST00000513957 IGFL1Q6UW32 110 aa4.58□□□□□ -1.68
NEDD4-210ENST00000513957 ORMDL1Q9P0S3 153 aa4.58□□□□□ -1.68
NEDD4-210ENST00000513957 TRBV7-7A0A0K0K1E9 115 aa4.57□□□□□ -1.68
NEDD4-210ENST00000513957 LOC105371267A0A1B0GV96 52 aa4.57□□□□□ -1.68
NEDD4-210ENST00000513957 FAM240AA0A1B0GVK7 77 aa4.56□□□□□ -1.68
NEDD4-210ENST00000513957 LST1O00453 97 aa4.56□□□□□ -1.68
NEDD4-210ENST00000513957 LYRM7Q5U5X0 104 aa4.56□□□□□ -1.68
NEDD4-210ENST00000513957 TEN1Q86WV5 123 aa4.56□□□□□ -1.68
NEDD4-210ENST00000513957 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
NEDD4-210ENST00000513957 H3BMG7 143 aa4.55□□□□□ -1.68
NEDD4-210ENST00000513957 SCGB1C2P0DMR2 95 aa4.55□□□□□ -1.68
NEDD4-210ENST00000513957 FABP2P12104 132 aa4.55□□□□□ -1.68
NEDD4-210ENST00000513957 H3BUT2 72 aa4.54□□□□□ -1.68
NEDD4-210ENST00000513957 C1orf195Q5TG92 126 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms