RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
TPM3-221ENST00000513769 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
TPM3-221ENST00000513769 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
TPM3-221ENST00000513769 LAMTOR3Q9UHA4 124 aa6.12□□□□□ -1.43
TPM3-221ENST00000513769 PCLOQ9Y6V0 5065 aa6.12□□□□□ -1.43
TPM3-221ENST00000513769 A0A1B0GW54 56 aa6.11□□□□□ -1.43
TPM3-221ENST00000513769 UBE2AP49459 152 aa6.11□□□□□ -1.43
TPM3-221ENST00000513769 Q8N377 158 aa6.11□□□□□ -1.43
TPM3-221ENST00000513769 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
TPM3-221ENST00000513769 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
TPM3-221ENST00000513769 SPRR1BP22528 89 aa6.1□□□□□ -1.43
TPM3-221ENST00000513769 KRTAP13-1Q8IUC0 172 aa6.1□□□□□ -1.43
TPM3-221ENST00000513769 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
TPM3-221ENST00000513769 CCKP06307 115 aa6.09□□□□□ -1.43
TPM3-221ENST00000513769 LINC01547P58512 204 aaPredicted RBP6.09□□□□□ -1.43
TPM3-221ENST00000513769 KRTAP10-1P60331 282 aa6.09□□□□□ -1.43
TPM3-221ENST00000513769 KRTAP11-1Q8IUC1 163 aa6.09□□□□□ -1.43
TPM3-221ENST00000513769 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
TPM3-221ENST00000513769 DNAH6Q9C0G6 4158 aa6.08□□□□□ -1.44
TPM3-221ENST00000513769 A0A1B0GVY2 172 aa6.08□□□□□ -1.44
TPM3-221ENST00000513769 ZNF861PO60384 105 aa6.08□□□□□ -1.44
TPM3-221ENST00000513769 FAM30AQ9NZY2 134 aa6.08□□□□□ -1.44
TPM3-221ENST00000513769 DNAH10Q8IVF4 4471 aa6.07□□□□□ -1.44
TPM3-221ENST00000513769 ERC2-IT1O76042 136 aa6.07□□□□□ -1.44
TPM3-221ENST00000513769 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
TPM3-221ENST00000513769 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
TPM3-221ENST00000513769 DEFB105AQ8NG35 78 aa6.07□□□□□ -1.44
TPM3-221ENST00000513769 HIGD2AQ9BW72 106 aa6.07□□□□□ -1.44
TPM3-221ENST00000513769 ZNF706Q9Y5V0 76 aaPredicted RBP6.07□□□□□ -1.44
TPM3-221ENST00000513769 TRBV7-4A0A0J9YYF1 115 aa6.06□□□□□ -1.44
TPM3-221ENST00000513769 PRLHP81277 87 aa6.06□□□□□ -1.44
TPM3-221ENST00000513769 KIAA1109Q2LD37 5005 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 IGLV8-61A0A075B6I0 122 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 IGLV7-43P04211 117 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
TPM3-221ENST00000513769 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 C14orf132Q9NPU4 83 aa6.05□□□□□ -1.44
TPM3-221ENST00000513769 HECTD4Q9Y4D8 3996 aa6.04□□□□□ -1.44
TPM3-221ENST00000513769 Q6ZQT0 140 aa6.04□□□□□ -1.44
TPM3-221ENST00000513769 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
TPM3-221ENST00000513769 SMIM29Q86T20 159 aa6.04□□□□□ -1.44
TPM3-221ENST00000513769 VPS25Q9BRG1 176 aa6.04□□□□□ -1.44
TPM3-221ENST00000513769 F8WEM9 126 aa6.03□□□□□ -1.44
TPM3-221ENST00000513769 ST20-AS1Q8NBB2 130 aa6.03□□□□□ -1.44
TPM3-221ENST00000513769 RYR1P21817 5038 aa6.02□□□□□ -1.45
TPM3-221ENST00000513769 LINC00483Q53H64 154 aa6.02□□□□□ -1.45
TPM3-221ENST00000513769 Q6JHZ5 121 aa6.02□□□□□ -1.45
TPM3-221ENST00000513769 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
TPM3-221ENST00000513769 SIGMAR1Q99720 223 aa6.02□□□□□ -1.45
TPM3-221ENST00000513769 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
TPM3-221ENST00000513769 DNAH17Q9UFH2 4485 aa6.01□□□□□ -1.45
TPM3-221ENST00000513769 LINC00643Q86TS7 51 aa6□□□□□ -1.45
TPM3-221ENST00000513769 SPRR4Q96PI1 79 aa6□□□□□ -1.45
TPM3-221ENST00000513769 PCP4P48539 62 aa5.98□□□□□ -1.45
TPM3-221ENST00000513769 XGP55808 180 aa5.98□□□□□ -1.45
TPM3-221ENST00000513769 Q6Q795 121 aa5.98□□□□□ -1.45
TPM3-221ENST00000513769 UBL5Q9BZL1 73 aa5.98□□□□□ -1.45
TPM3-221ENST00000513769 IMUPQ9GZP8 106 aa5.98□□□□□ -1.45
TPM3-221ENST00000513769 CRYGAP11844 174 aa5.97□□□□□ -1.45
TPM3-221ENST00000513769 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.46
TPM3-221ENST00000513769 LINC00846Q9NV44 126 aa5.96□□□□□ -1.46
TPM3-221ENST00000513769 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
TPM3-221ENST00000513769 SPINK6Q6UWN8 80 aa5.95□□□□□ -1.46
TPM3-221ENST00000513769 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
TPM3-221ENST00000513769 CDK2AP2O75956 126 aa5.94□□□□□ -1.46
TPM3-221ENST00000513769 Q8NBF4 154 aa5.94□□□□□ -1.46
TPM3-221ENST00000513769 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
TPM3-221ENST00000513769 TRBV7-7A0A0K0K1E9 115 aa5.93□□□□□ -1.46
TPM3-221ENST00000513769 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
TPM3-221ENST00000513769 IGFL1Q6UW32 110 aa5.93□□□□□ -1.46
TPM3-221ENST00000513769 A0A1B0GV72 72 aa5.92□□□□□ -1.46
TPM3-221ENST00000513769 A0A1W2PNM2 257 aa5.92□□□□□ -1.46
TPM3-221ENST00000513769 NREPQ16612 68 aa5.92□□□□□ -1.46
TPM3-221ENST00000513769 PKD1P98161 4303 aa5.92□□□□□ -1.46
TPM3-221ENST00000513769 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
TPM3-221ENST00000513769 CXCL6P80162 114 aa5.91□□□□□ -1.46
TPM3-221ENST00000513769 CD164Q04900 197 aa5.91□□□□□ -1.46
TPM3-221ENST00000513769 FAT2Q9NYQ8 4349 aa5.9□□□□□ -1.46
TPM3-221ENST00000513769 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.46
TPM3-221ENST00000513769 Q6ZVQ6 151 aa5.89□□□□□ -1.47
TPM3-221ENST00000513769 MT-ATP8P03928 68 aa5.88□□□□□ -1.47
TPM3-221ENST00000513769 DNAH11Q96DT5 4516 aa5.87□□□□□ -1.47
TPM3-221ENST00000513769 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
TPM3-221ENST00000513769 HAMPP81172 84 aa5.86□□□□□ -1.47
TPM3-221ENST00000513769 C9orf153Q5TBE3 101 aa5.86□□□□□ -1.47
TPM3-221ENST00000513769 SS18L2Q9UHA2 77 aa5.85□□□□□ -1.47
TPM3-221ENST00000513769 DYNC1H1Q14204 4646 aaKnown RBP5.85□□□□□ -1.47
TPM3-221ENST00000513769 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
TPM3-221ENST00000513769 BPY2O14599 106 aa5.84□□□□□ -1.47
TPM3-221ENST00000513769 SMR3BP02814 79 aaPredicted RBP5.84□□□□□ -1.47
TPM3-221ENST00000513769 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
TPM3-221ENST00000513769 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
TPM3-221ENST00000513769 J3KT08 172 aa5.83□□□□□ -1.48
TPM3-221ENST00000513769 MOBPQ13875 183 aa5.83□□□□□ -1.48
TPM3-221ENST00000513769 Q5XG85 94 aa5.83□□□□□ -1.48
TPM3-221ENST00000513769 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
TPM3-221ENST00000513769 HSPG2P98160 4391 aa5.82□□□□□ -1.48
TPM3-221ENST00000513769 A0A087WSZ3 146 aa5.82□□□□□ -1.48
TPM3-221ENST00000513769 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms