RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
HTT-212ENST00000513639 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
HTT-212ENST00000513639 HSBP1L1C9JCN9 74 aa4.04□□□□□ -1.76
HTT-212ENST00000513639 Q1RN00 199 aa4.04□□□□□ -1.76
HTT-212ENST00000513639 KRTAP3-1Q9BYR8 98 aa4.04□□□□□ -1.76
HTT-212ENST00000513639 S100A2P29034 98 aa4.03□□□□□ -1.76
HTT-212ENST00000513639 Q5XG85 94 aa4.03□□□□□ -1.76
HTT-212ENST00000513639 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
HTT-212ENST00000513639 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
HTT-212ENST00000513639 IGLV5-48A0A075B6I7 105 aa4.02□□□□□ -1.77
HTT-212ENST00000513639 KRTAP4-8A0A0G2JLE6 195 aa4.01□□□□□ -1.77
HTT-212ENST00000513639 TCL1BO95988 128 aa4.01□□□□□ -1.77
HTT-212ENST00000513639 SMIM29Q86T20 159 aa4.01□□□□□ -1.77
HTT-212ENST00000513639 SMIM11BQ8TCY0 68 aa4.01□□□□□ -1.77
HTT-212ENST00000513639 F8WEM9 126 aa4□□□□□ -1.77
HTT-212ENST00000513639 S100A6P06703 90 aa4□□□□□ -1.77
HTT-212ENST00000513639 hADV29S1A0JD25 119 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 SNCGO76070 127 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 S100A1P23297 94 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 C1orf195Q5TG92 126 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 HIST3H2BBQ8N257 126 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 HIST1H2BLQ99880 126 aa3.99□□□□□ -1.77
HTT-212ENST00000513639 C9orf92A6NGG3 77 aa3.98□□□□□ -1.77
HTT-212ENST00000513639 Q6JHZ5 121 aa3.98□□□□□ -1.77
HTT-212ENST00000513639 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
HTT-212ENST00000513639 IGLV8-61A0A075B6I0 122 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 SCGB1D1O95968 90 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 PCP4P48539 62 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 BVES-AS1Q5T3Y7 98 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 HIST1H4GQ99525 98 aa3.97□□□□□ -1.77
HTT-212ENST00000513639 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
HTT-212ENST00000513639 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.96□□□□□ -1.78
HTT-212ENST00000513639 PPDPFLQ8WWR9 84 aa3.96□□□□□ -1.78
HTT-212ENST00000513639 SNHG12Q9BXW3 62 aa3.96□□□□□ -1.78
HTT-212ENST00000513639 Q6ZQY7 126 aa3.95□□□□□ -1.78
HTT-212ENST00000513639 A0A0G2JQZ4 141 aa3.94□□□□□ -1.78
HTT-212ENST00000513639 DLEU1O43261 78 aa3.94□□□□□ -1.78
HTT-212ENST00000513639 COX8AP10176 69 aa3.94□□□□□ -1.78
HTT-212ENST00000513639 C12orf57Q99622 126 aa3.94□□□□□ -1.78
HTT-212ENST00000513639 H0YGX0 51 aa3.93□□□□□ -1.78
HTT-212ENST00000513639 CLEC2BQ92478 149 aa3.93□□□□□ -1.78
HTT-212ENST00000513639 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
HTT-212ENST00000513639 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
HTT-212ENST00000513639 RAB37Q96AX2 223 aa3.92□□□□□ -1.78
HTT-212ENST00000513639 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 LST1O00453 97 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 CFC1P0CG37 223 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
HTT-212ENST00000513639 ATP11AUNQ6ZP68 121 aa3.9□□□□□ -1.79
HTT-212ENST00000513639 C14orf144Q96I85 54 aa3.9□□□□□ -1.79
HTT-212ENST00000513639 SS18L2Q9UHA2 77 aa3.9□□□□□ -1.79
HTT-212ENST00000513639 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
HTT-212ENST00000513639 A0A0B4J2C4 111 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 A0A1B0GX51 115 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 Q6Q795 121 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 TEN1Q86WV5 123 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
HTT-212ENST00000513639 H3BQ85 93 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 H3BUT2 72 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 NDUFV3P56181 108 aaKnown RBP3.87□□□□□ -1.79
HTT-212ENST00000513639 SPATA45Q537H7 98 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 Q75L30 129 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 OBSCN-AS1Q96MR7 158 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 VAMP8Q9BV40 100 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
HTT-212ENST00000513639 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
HTT-212ENST00000513639 H3BMG7 143 aa3.86□□□□□ -1.79
HTT-212ENST00000513639 M0R2T5 61 aa3.86□□□□□ -1.79
HTT-212ENST00000513639 FABP2P12104 132 aa3.86□□□□□ -1.79
HTT-212ENST00000513639 MT1HP80294 61 aa3.86□□□□□ -1.79
HTT-212ENST00000513639 CEND1Q8N111 149 aa3.86□□□□□ -1.79
HTT-212ENST00000513639 Q96NJ1 140 aa3.85□□□□□ -1.79
HTT-212ENST00000513639 COX6CP09669 75 aa3.84□□□□□ -1.79
HTT-212ENST00000513639 C2orf91Q6ZV80 131 aa3.83□□□□□ -1.8
HTT-212ENST00000513639 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
HTT-212ENST00000513639 A0A087WSZ3 146 aa3.82□□□□□ -1.8
HTT-212ENST00000513639 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
HTT-212ENST00000513639 DNAL4O96015 105 aa3.82□□□□□ -1.8
HTT-212ENST00000513639 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
HTT-212ENST00000513639 ANKRD29Q8N6D5 301 aa3.82□□□□□ -1.8
HTT-212ENST00000513639 TRBV20-1A0A075B6N2 111 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 TRBV7-4A0A0J9YYF1 115 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 PSMB2P49721 201 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 KRTAP10-6P60371 365 aaPredicted RBP3.81□□□□□ -1.8
HTT-212ENST00000513639 C20orf166-AS1Q96NR2 134 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 ORMDL1Q9P0S3 153 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
HTT-212ENST00000513639 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
HTT-212ENST00000513639 A8MUU9 505 aa3.8□□□□□ -1.8
HTT-212ENST00000513639 FXYD2P54710 66 aa3.8□□□□□ -1.8
HTT-212ENST00000513639 LINC00313P59037 77 aa3.8□□□□□ -1.8
HTT-212ENST00000513639 HSD52Q0P140 79 aa3.8□□□□□ -1.8
HTT-212ENST00000513639 A0A1W2PNM2 257 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms