RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 A0A1B0GWB2 263 aa5.09□□□□□ -1.59
TCOF1-212ENST00000513538 S100A1P23297 94 aa5.09□□□□□ -1.59
TCOF1-212ENST00000513538 C1orf195Q5TG92 126 aa5.09□□□□□ -1.59
TCOF1-212ENST00000513538 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
TCOF1-212ENST00000513538 A0A0G2JQZ4 141 aa5.08□□□□□ -1.6
TCOF1-212ENST00000513538 CD164Q04900 197 aa5.08□□□□□ -1.6
TCOF1-212ENST00000513538 TAL2Q16559 108 aa5.08□□□□□ -1.6
TCOF1-212ENST00000513538 Q1RN00 199 aa5.08□□□□□ -1.6
TCOF1-212ENST00000513538 TEX49A0A1B0GTD5 131 aa5.07□□□□□ -1.6
TCOF1-212ENST00000513538 A4D1N5 150 aa5.07□□□□□ -1.6
TCOF1-212ENST00000513538 A6NDN8 102 aa5.07□□□□□ -1.6
TCOF1-212ENST00000513538 Q5XG85 94 aa5.07□□□□□ -1.6
TCOF1-212ENST00000513538 SMIM11BQ8TCY0 68 aa5.07□□□□□ -1.6
TCOF1-212ENST00000513538 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
TCOF1-212ENST00000513538 HSBP1L1C9JCN9 74 aa5.06□□□□□ -1.6
TCOF1-212ENST00000513538 S100A2P29034 98 aa5.06□□□□□ -1.6
TCOF1-212ENST00000513538 NHP2Q9NX24 153 aaKnown RBP5.06□□□□□ -1.6
TCOF1-212ENST00000513538 DEFB105AQ8NG35 78 aa5.05□□□□□ -1.6
TCOF1-212ENST00000513538 PRO1933Q9H354 126 aa5.05□□□□□ -1.6
TCOF1-212ENST00000513538 VAMP3Q15836 100 aa5.04□□□□□ -1.6
TCOF1-212ENST00000513538 S100A6P06703 90 aa5.03□□□□□ -1.6
TCOF1-212ENST00000513538 LINC00575Q6W349 94 aa5.02□□□□□ -1.61
TCOF1-212ENST00000513538 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
TCOF1-212ENST00000513538 DLEU1O43261 78 aa5.01□□□□□ -1.61
TCOF1-212ENST00000513538 COX8AP10176 69 aa5.01□□□□□ -1.61
TCOF1-212ENST00000513538 SCGB1D1O95968 90 aa4.99□□□□□ -1.61
TCOF1-212ENST00000513538 Q6Q795 121 aa4.99□□□□□ -1.61
TCOF1-212ENST00000513538 F8WEM9 126 aa4.98□□□□□ -1.61
TCOF1-212ENST00000513538 hADV29S1A0JD25 119 aa4.97□□□□□ -1.61
TCOF1-212ENST00000513538 TCL1BO95988 128 aa4.97□□□□□ -1.61
TCOF1-212ENST00000513538 Q6ZQY7 126 aa4.97□□□□□ -1.61
TCOF1-212ENST00000513538 SSPOA2VEC9 5147 aa4.96□□□□□ -1.62
TCOF1-212ENST00000513538 SNCGO76070 127 aa4.96□□□□□ -1.62
TCOF1-212ENST00000513538 HIST1H4GQ99525 98 aa4.96□□□□□ -1.62
TCOF1-212ENST00000513538 HIGD1BQ9P298 99 aa4.96□□□□□ -1.62
TCOF1-212ENST00000513538 CFC1P0CG37 223 aa4.95□□□□□ -1.62
TCOF1-212ENST00000513538 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
TCOF1-212ENST00000513538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.95□□□□□ -1.62
TCOF1-212ENST00000513538 C2orf91Q6ZV80 131 aa4.95□□□□□ -1.62
TCOF1-212ENST00000513538 C14orf144Q96I85 54 aa4.95□□□□□ -1.62
TCOF1-212ENST00000513538 C12orf57Q99622 126 aa4.95□□□□□ -1.62
TCOF1-212ENST00000513538 USH2AO75445 5202 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 OCIAD2Q56VL3 154 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 Q6JHZ5 121 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 Q75L30 129 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 PPDPFLQ8WWR9 84 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
TCOF1-212ENST00000513538 SPATA45Q537H7 98 aa4.93□□□□□ -1.62
TCOF1-212ENST00000513538 OBSCN-AS1Q96MR7 158 aa4.93□□□□□ -1.62
TCOF1-212ENST00000513538 A0A0B4J2C4 111 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 TRBV7-7A0A0K0K1E9 115 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 MT2AP02795 61 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 CLEC2BQ92478 149 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 SNHG12Q9BXW3 62 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
TCOF1-212ENST00000513538 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
TCOF1-212ENST00000513538 KRTAP19-1Q8IUB9 90 aa4.91□□□□□ -1.62
TCOF1-212ENST00000513538 FAM218AQ96MZ4 157 aa4.91□□□□□ -1.62
TCOF1-212ENST00000513538 RAB37Q96AX2 223 aa4.9□□□□□ -1.63
TCOF1-212ENST00000513538 VAMP8Q9BV40 100 aa4.9□□□□□ -1.63
TCOF1-212ENST00000513538 H0YGX0 51 aa4.89□□□□□ -1.63
TCOF1-212ENST00000513538 MT1FP04733 61 aa4.89□□□□□ -1.63
TCOF1-212ENST00000513538 CEND1Q8N111 149 aa4.89□□□□□ -1.63
TCOF1-212ENST00000513538 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
TCOF1-212ENST00000513538 A0A1B0GX51 115 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 C9orf118A6NHY6 69 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 H3BUT2 72 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 FXYD2P54710 66 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 PYY3Q5JQD4 70 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 PRO1854Q9UHT4 67 aa4.87□□□□□ -1.63
TCOF1-212ENST00000513538 NDUFV3P56181 108 aaKnown RBP4.86□□□□□ -1.63
TCOF1-212ENST00000513538 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
TCOF1-212ENST00000513538 Q96NJ1 140 aa4.86□□□□□ -1.63
TCOF1-212ENST00000513538 C20orf166-AS1Q96NR2 134 aa4.86□□□□□ -1.63
TCOF1-212ENST00000513538 A8MUU9 505 aa4.85□□□□□ -1.63
TCOF1-212ENST00000513538 SS18L2Q9UHA2 77 aa4.85□□□□□ -1.63
TCOF1-212ENST00000513538 LST1O00453 97 aa4.84□□□□□ -1.63
TCOF1-212ENST00000513538 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
TCOF1-212ENST00000513538 TRIAP1O43715 76 aa4.83□□□□□ -1.64
TCOF1-212ENST00000513538 TEN1Q86WV5 123 aa4.83□□□□□ -1.64
TCOF1-212ENST00000513538 A0A1W2PNM2 257 aa4.81□□□□□ -1.64
TCOF1-212ENST00000513538 H3BMG7 143 aa4.81□□□□□ -1.64
TCOF1-212ENST00000513538 H3BQ85 93 aa4.81□□□□□ -1.64
TCOF1-212ENST00000513538 HSD52Q0P140 79 aa4.81□□□□□ -1.64
TCOF1-212ENST00000513538 TRBV20-1A0A075B6N2 111 aa4.8□□□□□ -1.64
TCOF1-212ENST00000513538 FABP2P12104 132 aa4.8□□□□□ -1.64
TCOF1-212ENST00000513538 A0A087WSZ3 146 aa4.79□□□□□ -1.64
TCOF1-212ENST00000513538 K7ERJ3 54 aa4.79□□□□□ -1.64
TCOF1-212ENST00000513538 DNAL4O96015 105 aa4.79□□□□□ -1.64
TCOF1-212ENST00000513538 COX6CP09669 75 aa4.79□□□□□ -1.64
TCOF1-212ENST00000513538 DSCR10P59022 87 aa4.78□□□□□ -1.64
TCOF1-212ENST00000513538 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
TCOF1-212ENST00000513538 MPLKIPQ8TAP9 179 aa4.78□□□□□ -1.64
TCOF1-212ENST00000513538 HRES1P13985 223 aa4.77□□□□□ -1.65
TCOF1-212ENST00000513538 PSMB2P49721 201 aa4.77□□□□□ -1.65
TCOF1-212ENST00000513538 UQCR10Q9UDW1 63 aa4.77□□□□□ -1.65
TCOF1-212ENST00000513538 FAM236DA0A1B0GTK5 79 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms