RNA–Protein interactions for RNA: ENST00000513459.5

PACRGL-227, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-227ENST00000513459 PPDPFLQ8WWR9 84 aa12.56□□□□□ -0.4
PACRGL-227ENST00000513459 LRP1Q07954 4544 aaKnown RBP12.56□□□□□ -0.4
PACRGL-227ENST00000513459 IGLV9-49A0A0B4J1Y8 123 aa12.56□□□□□ -0.4
PACRGL-227ENST00000513459 KRTAP13-2Q52LG2 175 aa12.56□□□□□ -0.4
PACRGL-227ENST00000513459 TRBV20-1A0A075B6N2 111 aa12.55□□□□□ -0.4
PACRGL-227ENST00000513459 A0A1W2PPM0 123 aa12.55□□□□□ -0.4
PACRGL-227ENST00000513459 FABP2P12104 132 aa12.54□□□□□ -0.4
PACRGL-227ENST00000513459 TCL1BO95988 128 aa12.53□□□□□ -0.4
PACRGL-227ENST00000513459 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
PACRGL-227ENST00000513459 C3orf22Q8N5N4 141 aa12.53□□□□□ -0.4
PACRGL-227ENST00000513459 ORMDL1Q9P0S3 153 aa12.53□□□□□ -0.4
PACRGL-227ENST00000513459 C9orf153Q5TBE3 101 aa12.52□□□□□ -0.41
PACRGL-227ENST00000513459 H3BQ85 93 aa12.51□□□□□ -0.41
PACRGL-227ENST00000513459 MOBPQ13875 183 aa12.51□□□□□ -0.41
PACRGL-227ENST00000513459 SMIM29Q86T20 159 aa12.51□□□□□ -0.41
PACRGL-227ENST00000513459 F8WEM9 126 aa12.5□□□□□ -0.41
PACRGL-227ENST00000513459 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
PACRGL-227ENST00000513459 SSBP3-AS1Q7Z2R9 100 aa12.48□□□□□ -0.41
PACRGL-227ENST00000513459 Q8NBF4 154 aa12.48□□□□□ -0.41
PACRGL-227ENST00000513459 TMEM256-PLSCR3K7ERE1 68 aa12.47□□□□□ -0.41
PACRGL-227ENST00000513459 SPCS1Q9Y6A9 102 aa12.43□□□□□ -0.42
PACRGL-227ENST00000513459 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
PACRGL-227ENST00000513459 DMBT1Q9UGM3 2413 aaPredicted RBP12.43□□□□□ -0.42
PACRGL-227ENST00000513459 LINC00304Q8N9R0 145 aa12.42□□□□□ -0.42
PACRGL-227ENST00000513459 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
PACRGL-227ENST00000513459 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
PACRGL-227ENST00000513459 H3BMG7 143 aa12.4□□□□□ -0.42
PACRGL-227ENST00000513459 C9JAW5 83 aa12.39□□□□□ -0.43
PACRGL-227ENST00000513459 UBE2V1Q13404 147 aa12.38□□□□□ -0.43
PACRGL-227ENST00000513459 SPAG11AQ6PDA7 123 aa12.38□□□□□ -0.43
PACRGL-227ENST00000513459 Q6JHZ5 121 aa12.37□□□□□ -0.43
PACRGL-227ENST00000513459 IGLV8-61A0A075B6I0 122 aa12.36□□□□□ -0.43
PACRGL-227ENST00000513459 ANKRD29Q8N6D5 301 aa12.35□□□□□ -0.43
PACRGL-227ENST00000513459 TNXBP22105 4242 aa12.33□□□□□ -0.43
PACRGL-227ENST00000513459 K7EP34 96 aa12.33□□□□□ -0.44
PACRGL-227ENST00000513459 GTF2H5Q6ZYL4 71 aa12.33□□□□□ -0.44
PACRGL-227ENST00000513459 SPINK1P00995 79 aa12.32□□□□□ -0.44
PACRGL-227ENST00000513459 A0A1B0GV72 72 aa12.3□□□□□ -0.44
PACRGL-227ENST00000513459 IGFL1Q6UW32 110 aa12.3□□□□□ -0.44
PACRGL-227ENST00000513459 H3BT86 120 aa12.29□□□□□ -0.44
PACRGL-227ENST00000513459 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
PACRGL-227ENST00000513459 A0A0G2JQZ4 141 aa12.28□□□□□ -0.44
PACRGL-227ENST00000513459 CD164Q04900 197 aa12.28□□□□□ -0.44
PACRGL-227ENST00000513459 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
PACRGL-227ENST00000513459 RBM3P98179 157 aaKnown RBP12.27□□□□□ -0.45
PACRGL-227ENST00000513459 JMJD7-PLA2G4BH0Y9G9 81 aa12.25□□□□□ -0.45
PACRGL-227ENST00000513459 RPS29P62273 56 aaKnown RBP12.24□□□□□ -0.45
PACRGL-227ENST00000513459 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
PACRGL-227ENST00000513459 LIMD2Q9BT23 127 aa12.2□□□□□ -0.46
PACRGL-227ENST00000513459 TEN1Q86WV5 123 aa12.2□□□□□ -0.46
PACRGL-227ENST00000513459 TRBV7-4A0A0J9YYF1 115 aa12.18□□□□□ -0.46
PACRGL-227ENST00000513459 Q6Q795 121 aa12.17□□□□□ -0.46
PACRGL-227ENST00000513459 PRO0461Q9UI25 63 aa12.17□□□□□ -0.46
PACRGL-227ENST00000513459 TRBV7-7A0A0K0K1E9 115 aa12.16□□□□□ -0.46
PACRGL-227ENST00000513459 F8W1H4 67 aa12.15□□□□□ -0.46
PACRGL-227ENST00000513459 SMCPP49901 116 aaPredicted RBP12.15□□□□□ -0.46
PACRGL-227ENST00000513459 CCKP06307 115 aa12.15□□□□□ -0.46
PACRGL-227ENST00000513459 PDE6GP18545 87 aa12.14□□□□□ -0.47
PACRGL-227ENST00000513459 OBSCN-AS1Q96MR7 158 aa12.14□□□□□ -0.47
PACRGL-227ENST00000513459 A0A1B0GV90 55 aa12.13□□□□□ -0.47
PACRGL-227ENST00000513459 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
PACRGL-227ENST00000513459 Q5XG85 94 aa12.13□□□□□ -0.47
PACRGL-227ENST00000513459 VPS25Q9BRG1 176 aa12.13□□□□□ -0.47
PACRGL-227ENST00000513459 C14orf132Q9NPU4 83 aa12.13□□□□□ -0.47
PACRGL-227ENST00000513459 HERC1Q15751 4861 aa12.1□□□□□ -0.47
PACRGL-227ENST00000513459 LOC110117498A0A087WWA1 95 aa12.1□□□□□ -0.47
PACRGL-227ENST00000513459 RETNLBQ9BQ08 111 aa12.1□□□□□ -0.47
PACRGL-227ENST00000513459 A0A087WSZ3 146 aa12.08□□□□□ -0.48
PACRGL-227ENST00000513459 SS18L2Q9UHA2 77 aa12.08□□□□□ -0.48
PACRGL-227ENST00000513459 PRR4Q16378 134 aa12.07□□□□□ -0.48
PACRGL-227ENST00000513459 Q6ZQT0 140 aa12.07□□□□□ -0.48
PACRGL-227ENST00000513459 C21orf62-AS1Q17RA5 79 aa12.07□□□□□ -0.48
PACRGL-227ENST00000513459 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
PACRGL-227ENST00000513459 FP248Q71RG6 208 aaPredicted RBP12.02□□□□□ -0.49
PACRGL-227ENST00000513459 A0A1B0GW54 56 aa12□□□□□ -0.49
PACRGL-227ENST00000513459 ETDBQ3ZM63 59 aa12□□□□□ -0.49
PACRGL-227ENST00000513459 C1orf195Q5TG92 126 aa11.99□□□□□ -0.49
PACRGL-227ENST00000513459 IGLV7-46A0A075B6I9 117 aa11.97□□□□□ -0.49
PACRGL-227ENST00000513459 Q96NJ1 140 aa11.86□□□□□ -0.51
PACRGL-227ENST00000513459 LINC00472Q9H8W2 130 aa11.85□□□□□ -0.51
PACRGL-227ENST00000513459 NREPQ16612 68 aa11.84□□□□□ -0.51
PACRGL-227ENST00000513459 TPRXLQ17RH7 258 aa11.84□□□□□ -0.51
PACRGL-227ENST00000513459 HMCN2Q8NDA2 5059 aa11.84□□□□□ -0.51
PACRGL-227ENST00000513459 IGKV4-1P06312 121 aa11.82□□□□□ -0.52
PACRGL-227ENST00000513459 DEFB116Q30KQ4 102 aa11.82□□□□□ -0.52
PACRGL-227ENST00000513459 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
PACRGL-227ENST00000513459 KRTAP13-3Q3SY46 172 aa11.79□□□□□ -0.52
PACRGL-227ENST00000513459 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
PACRGL-227ENST00000513459 J3KT08 172 aa11.78□□□□□ -0.52
PACRGL-227ENST00000513459 UBL5Q9BZL1 73 aa11.75□□□□□ -0.53
PACRGL-227ENST00000513459 LINC00846Q9NV44 126 aa11.74□□□□□ -0.53
PACRGL-227ENST00000513459 C9orf92A6NGG3 77 aa11.74□□□□□ -0.53
PACRGL-227ENST00000513459 Q6ZVQ6 151 aa11.73□□□□□ -0.53
PACRGL-227ENST00000513459 ACYP1P07311 99 aa11.72□□□□□ -0.53
PACRGL-227ENST00000513459 NDUFB1O75438 58 aa11.69□□□□□ -0.54
PACRGL-227ENST00000513459 FAM240AA0A1B0GVK7 77 aa11.68□□□□□ -0.54
PACRGL-227ENST00000513459 BPY2O14599 106 aa11.68□□□□□ -0.54
PACRGL-227ENST00000513459 LPAP08519 4548 aa11.67□□□□□ -0.54
PACRGL-227ENST00000513459 IGHV6-1A0A0B4J1U7 121 aa11.65□□□□□ -0.54
PACRGL-227ENST00000513459 A8MWP4 228 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms