RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 C6orf99Q4VX62 202 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 CAMK2N1Q7Z7J9 78 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 TIMM17AQ99595 171 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 OSTCQ9NRP0 149 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 CYSLTR1Q9Y271 337 aa1.82□□□□□ -2.12
PDLIM5-218ENST00000513341 KMT2DO14686 5537 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 PMAIP1Q13794 54 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 ORMDL2Q53FV1 153 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 SFTA2Q6UW10 78 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 SCGB1D4Q6XE38 83 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 SMIM7Q9BQ49 75 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 NAT8BQ9UHF3 227 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 ERG28Q9UKR5 140 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 LAMTOR2Q9Y2Q5 125 aa1.81□□□□□ -2.12
PDLIM5-218ENST00000513341 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 D6R8Y8 96 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 NDUFC2O95298 119 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 SRP19P09132 144 aaKnown RBP1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 PEA15Q15121 130 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 OCIAD2Q56VL3 154 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 C9orf153Q5TBE3 101 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 SLC25A34Q6PIV7 304 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 TMEM136Q6ZRR5 245 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 ORMDL3Q8N138 153 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 MDN1Q9NU22 5596 aa1.8□□□□□ -2.12
PDLIM5-218ENST00000513341 FAM236DA0A1B0GTK5 79 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 LOC389332A0A1B0GUA5 103 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 H3BRM9 83 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 ERC2-IT1O76042 136 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 NPYP01303 97 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 FAM236CP0DP71 79 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 SPRR1BP22528 89 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 PSMB2P49721 201 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 COA6Q5JTJ3 125 aaKnown RBP1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 Q8N8P6 123 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 Q8NDZ9 215 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 NAT8Q9UHE5 227 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 V9GYV3 84 aa1.79□□□□□ -2.12
PDLIM5-218ENST00000513341 A0A1B0GXF2 115 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 SMIM27A0A1W2PRY6 76 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 C9JQL5 133 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 M0R143 59 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 NDUFS5O43920 106 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 RPL23P62829 140 aaKnown RBP1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 ADIRFQ15847 76 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 Q6ZRX8 168 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 PRELID3AQ96N28 172 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 C20orf166-AS1Q96NR2 134 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 Q9BRP9 147 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 KRTAP2-1Q9BYU5 128 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 PRO1933Q9H354 126 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 LAMTOR3Q9UHA4 124 aa1.78□□□□□ -2.12
PDLIM5-218ENST00000513341 TRBV10-3A0A0K0K1G6 114 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 C8orf87E5RJ46 101 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 H7C2G1 150 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 MT-ND4LP03901 98 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 SPINK8P0C7L1 97 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 RHEBQ15382 184 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 HRCT1Q6UXD1 115 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 ATP5L2Q7Z4Y8 100 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 ANKRD29Q8N6D5 301 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 TOMM6Q96B49 74 aa1.77□□□□□ -2.13
PDLIM5-218ENST00000513341 TRBV10-2A0A0K0K1G8 114 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 TMEM218A2RU14 115 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 C9JAW5 83 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 TCL1BO95988 128 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 NMUP48645 174 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 LINC00158P58513 81 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 SCGB3A1Q96QR1 104 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 CST9LQ9H4G1 147 aa1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 NXT2Q9NPJ8 142 aaKnown RBP1.76□□□□□ -2.13
PDLIM5-218ENST00000513341 LOC107984156A0A0G2JMH3 177 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 J3QR89 54 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 PSPHP1O15172 72 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 HINT1P49773 126 aaPredicted RBP1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 FABP9Q0Z7S8 132 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 CLLU1Q5K131 121 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 COL5A1-AS1Q5SY13 56 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 ARL17AQ8IVW1 177 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 RBM12B-AS1Q9P1G2 102 aa1.75□□□□□ -2.13
PDLIM5-218ENST00000513341 A0A0G2JQZ4 141 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 A8MWP4 228 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 DPM2O94777 84 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 IGLC3P0DOY3 106 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 ST20-AS1Q8NBB2 130 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 ANAPC13Q9BS18 74 aa1.74□□□□□ -2.13
PDLIM5-218ENST00000513341 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 A0A096LNJ9 63 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 A6NN06 94 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 NCR3O14931 201 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 MP68P56378 58 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 NDUFA6P56556 154 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 LYRM7Q5U5X0 104 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 GTF2H5Q6ZYL4 71 aa1.73□□□□□ -2.13
PDLIM5-218ENST00000513341 PCP2Q8IVA1 136 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms