RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SFTA2Q6UW10 78 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 DAND5Q8N907 189 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 TMEM126AQ9H061 195 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 RBM12B-AS1Q9P1G2 102 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 TP73-AS1Q9UF72 201 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 PCLOQ9Y6V0 5065 aa2.07□□□□□ -2.08
HTT-210ENST00000512909 J3QQQ9 107 aa2.06□□□□□ -2.08
HTT-210ENST00000512909 HINT1P49773 126 aaPredicted RBP2.06□□□□□ -2.08
HTT-210ENST00000512909 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
HTT-210ENST00000512909 FLG2Q5D862 2391 aaPredicted RBP2.05□□□□□ -2.08
HTT-210ENST00000512909 RYR1P21817 5038 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 SYS1-DBNDD2H3BUS1 97 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 DDTP30046 118 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 CD164Q04900 197 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 KRTAP25-1Q3LHN0 102 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
HTT-210ENST00000512909 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
HTT-210ENST00000512909 TRBV10-3A0A0K0K1G6 114 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 C20orf202A1L168 122 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 ZNF815PA8K554 130 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 A8MWP4 228 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BKO60814 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 S100A6P06703 90 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BJP06899 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BOP23527 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BBP33778 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BDP58876 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 TSPEAR-AS2P59090 65 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BCP62807 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST2H2BEQ16778 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.04□□□□□ -2.08
HTT-210ENST00000512909 SCGB1D4Q6XE38 83 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 ATOH7Q8N100 152 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 Q8NDZ9 215 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BHQ93079 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BNQ99877 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 HIST1H2BMQ99879 126 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 RETNLBQ9BQ08 111 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 FAT2Q9NYQ8 4349 aa2.04□□□□□ -2.08
HTT-210ENST00000512909 DYNC1H1Q14204 4646 aaKnown RBP2.03□□□□□ -2.08
HTT-210ENST00000512909 C3orf79P0CE67 100 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 MP68P56378 58 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 JOSD1Q15040 202 aaPredicted RBP2.03□□□□□ -2.08
HTT-210ENST00000512909 C9orf153Q5TBE3 101 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 TTTY13Q9BZ97 58 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
HTT-210ENST00000512909 TRAV23DV6A0A075B6W5 121 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 HSBP1L1C9JCN9 74 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 S100A1P23297 94 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 FAM229BQ4G0N7 80 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 HRCT1Q6UXD1 115 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 LINC00308Q8TCZ7 52 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 SPRR4Q96PI1 79 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 KCNQ1DNQ9H478 68 aa2.02□□□□□ -2.09
HTT-210ENST00000512909 SPANXB1Q9NS25 103 aaPredicted RBP2.02□□□□□ -2.09
HTT-210ENST00000512909 VPS13BQ7Z7G8 4022 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 TRBV10-2A0A0K0K1G8 114 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 ZNF73O43830 326 aaPredicted RBP2.01□□□□□ -2.09
HTT-210ENST00000512909 ERC2-IT1O76042 136 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 NDUFC2O95298 119 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 COX7BP24311 80 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 LINC01545Q5VT33 79 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 SPAG11AQ6PDA7 123 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 MUSTN1Q8IVN3 82 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 COPS9Q8WXC6 57 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 DMBT1Q9UGM3 2413 aaPredicted RBP2.01□□□□□ -2.09
HTT-210ENST00000512909 DNAH5Q8TE73 4624 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 DNAH11Q96DT5 4516 aa2.01□□□□□ -2.09
HTT-210ENST00000512909 HSPG2P98160 4391 aa2□□□□□ -2.09
HTT-210ENST00000512909 SLC25A20O43772 301 aa2□□□□□ -2.09
HTT-210ENST00000512909 KRTAP5-8O75690 187 aa2□□□□□ -2.09
HTT-210ENST00000512909 AKR1D1P51857 326 aa2□□□□□ -2.09
HTT-210ENST00000512909 SOSTDC1Q6X4U4 206 aa2□□□□□ -2.09
HTT-210ENST00000512909 SSBP3-AS1Q7Z2R9 100 aa2□□□□□ -2.09
HTT-210ENST00000512909 KRTAP13-1Q8IUC0 172 aa2□□□□□ -2.09
HTT-210ENST00000512909 SPANXCQ9NY87 97 aa2□□□□□ -2.09
HTT-210ENST00000512909 LAMTOR3Q9UHA4 124 aa2□□□□□ -2.09
HTT-210ENST00000512909 APOBP04114 4563 aaKnown RBP1.99□□□□□ -2.09
HTT-210ENST00000512909 LOC107984156A0A0G2JMH3 177 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 H7C2G1 150 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 TIMM17BO60830 172 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 IFITM1P13164 125 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 Q6ZRX8 168 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 ARL17AQ8IVW1 177 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 SPANXDQ9BXN6 97 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
HTT-210ENST00000512909 SPINK1P00995 79 aa1.98□□□□□ -2.09
HTT-210ENST00000512909 SPRR1AP35321 89 aa1.98□□□□□ -2.09
HTT-210ENST00000512909 HIST3H2BBQ8N257 126 aa1.98□□□□□ -2.09
HTT-210ENST00000512909 C12orf57Q99622 126 aa1.98□□□□□ -2.09
HTT-210ENST00000512909 Q9BRP9 147 aa1.98□□□□□ -2.09
HTT-210ENST00000512909 TRAV13-2A0A0B4J235 113 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 TEX49A0A1B0GTD5 131 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 A0A1B0GU33 70 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 F8WEM9 126 aa1.97□□□□□ -2.09
HTT-210ENST00000512909 SNCGO76070 127 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms