RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 Q6ZSA8 131 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 SCXQ7RTU7 201 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 CIRBP-AS1Q8TBR5 109 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 PLAC8Q9NZF1 115 aa4.29□□□□□ -1.72
RFC1-213ENST00000512275 A0A1W2PPM0 123 aa4.28□□□□□ -1.72
RFC1-213ENST00000512275 ZNF73O43830 326 aaPredicted RBP4.28□□□□□ -1.72
RFC1-213ENST00000512275 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
RFC1-213ENST00000512275 CLEC2BQ92478 149 aa4.28□□□□□ -1.72
RFC1-213ENST00000512275 DIRC1Q969H9 104 aa4.28□□□□□ -1.72
RFC1-213ENST00000512275 FABP2P12104 132 aa4.27□□□□□ -1.73
RFC1-213ENST00000512275 VAMP3Q15836 100 aa4.27□□□□□ -1.73
RFC1-213ENST00000512275 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
RFC1-213ENST00000512275 KCNQ1DNQ9H478 68 aa4.27□□□□□ -1.73
RFC1-213ENST00000512275 LRP1BQ9NZR2 4599 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 COX6CP09669 75 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 COX7BP24311 80 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 LYRM7Q5U5X0 104 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 CBY1Q9Y3M2 126 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 SPCS1Q9Y6A9 102 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
RFC1-213ENST00000512275 ZNF861PO60384 105 aa4.25□□□□□ -1.73
RFC1-213ENST00000512275 TCL1BO95988 128 aa4.25□□□□□ -1.73
RFC1-213ENST00000512275 SPRR1AP35321 89 aa4.25□□□□□ -1.73
RFC1-213ENST00000512275 PRLHP81277 87 aa4.25□□□□□ -1.73
RFC1-213ENST00000512275 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
RFC1-213ENST00000512275 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
RFC1-213ENST00000512275 K7EP34 96 aa4.24□□□□□ -1.73
RFC1-213ENST00000512275 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
RFC1-213ENST00000512275 PSORS1C2Q9UIG4 136 aa4.24□□□□□ -1.73
RFC1-213ENST00000512275 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
RFC1-213ENST00000512275 H0YGX0 51 aa4.23□□□□□ -1.73
RFC1-213ENST00000512275 BCE1O60756 84 aa4.23□□□□□ -1.73
RFC1-213ENST00000512275 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
RFC1-213ENST00000512275 C1orf137Q5JT78 98 aa4.23□□□□□ -1.73
RFC1-213ENST00000512275 Q6ZRX8 168 aa4.23□□□□□ -1.73
RFC1-213ENST00000512275 TRBV7-6A0A0J9YX20 115 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 H3BMG7 143 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 LST1O00453 97 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
RFC1-213ENST00000512275 UBE2AP49459 152 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 LINC00575Q6W349 94 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 GTF2H5Q6ZYL4 71 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 Q9BRP9 147 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
RFC1-213ENST00000512275 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.73
RFC1-213ENST00000512275 TRBV20-1A0A075B6N2 111 aa4.21□□□□□ -1.74
RFC1-213ENST00000512275 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
RFC1-213ENST00000512275 C9JAW5 83 aa4.21□□□□□ -1.74
RFC1-213ENST00000512275 SLC25A20O43772 301 aa4.21□□□□□ -1.74
RFC1-213ENST00000512275 SMCR5Q8TEV8 140 aa4.21□□□□□ -1.74
RFC1-213ENST00000512275 ERC2-IT1O76042 136 aa4.2□□□□□ -1.74
RFC1-213ENST00000512275 DNAL4O96015 105 aa4.2□□□□□ -1.74
RFC1-213ENST00000512275 TRACP01848 142 aa4.2□□□□□ -1.74
RFC1-213ENST00000512275 Q6ZQY7 126 aa4.2□□□□□ -1.74
RFC1-213ENST00000512275 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
RFC1-213ENST00000512275 RPL37AP61513 92 aaKnown RBP4.19□□□□□ -1.74
RFC1-213ENST00000512275 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
RFC1-213ENST00000512275 ST20-AS1Q8NBB2 130 aa4.19□□□□□ -1.74
RFC1-213ENST00000512275 A0A1B0GX51 115 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 H0Y9J4 135 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 SNCGO76070 127 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 INAFM2P0DMQ5 153 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 DEFB105AQ8NG35 78 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 ORMDL1Q9P0S3 153 aa4.18□□□□□ -1.74
RFC1-213ENST00000512275 A8MU10 97 aa4.17□□□□□ -1.74
RFC1-213ENST00000512275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.17□□□□□ -1.74
RFC1-213ENST00000512275 PRO0461Q9UI25 63 aa4.17□□□□□ -1.74
RFC1-213ENST00000512275 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
RFC1-213ENST00000512275 RYR1P21817 5038 aa4.16□□□□□ -1.74
RFC1-213ENST00000512275 A0A1B0GV72 72 aa4.16□□□□□ -1.74
RFC1-213ENST00000512275 BAALC-AS2P0C853 105 aa4.16□□□□□ -1.74
RFC1-213ENST00000512275 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
RFC1-213ENST00000512275 KIAA1109Q2LD37 5005 aa4.15□□□□□ -1.74
RFC1-213ENST00000512275 H3BT86 120 aa4.15□□□□□ -1.75
RFC1-213ENST00000512275 C3orf22Q8N5N4 141 aa4.15□□□□□ -1.75
RFC1-213ENST00000512275 FAT1Q14517 4588 aa4.14□□□□□ -1.75
RFC1-213ENST00000512275 IGLV5-48A0A075B6I7 105 aa4.14□□□□□ -1.75
RFC1-213ENST00000512275 ANKRD29Q8N6D5 301 aa4.14□□□□□ -1.75
RFC1-213ENST00000512275 SPRR4Q96PI1 79 aa4.14□□□□□ -1.75
RFC1-213ENST00000512275 HSPG2P98160 4391 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 F8W1H4 67 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 OXTP01178 125 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
RFC1-213ENST00000512275 OCIAD2Q56VL3 154 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 Q5VSD8 79 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 LAMTOR3Q9UHA4 124 aa4.13□□□□□ -1.75
RFC1-213ENST00000512275 ZNF706Q9Y5V0 76 aaPredicted RBP4.13□□□□□ -1.75
RFC1-213ENST00000512275 TEX49A0A1B0GTD5 131 aa4.12□□□□□ -1.75
RFC1-213ENST00000512275 TMEM256-PLSCR3K7ERE1 68 aa4.12□□□□□ -1.75
RFC1-213ENST00000512275 ETDBQ3ZM63 59 aa4.12□□□□□ -1.75
RFC1-213ENST00000512275 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 BIRC6Q9NR09 4857 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 VPS13BQ7Z7G8 4022 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 F8WEM9 126 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 H3BQ85 93 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 SPRR1BP22528 89 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 LINC00483Q53H64 154 aa4.1□□□□□ -1.75
RFC1-213ENST00000512275 SPINK6Q6UWN8 80 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms