RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TRBV6-8A0A0A6YYG3 113 aa3.21□□□□□ -1.9
TRAPPC11-208ENST00000511955 A0A0J9YWU9 116 aa3.21□□□□□ -1.9
TRAPPC11-208ENST00000511955 PSCAO43653 123 aa3.21□□□□□ -1.9
TRAPPC11-208ENST00000511955 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
TRAPPC11-208ENST00000511955 PDE6HQ13956 83 aa3.2□□□□□ -1.9
TRAPPC11-208ENST00000511955 LRCOL1A6NCL2 159 aa3.2□□□□□ -1.9
TRAPPC11-208ENST00000511955 IGLV10-54A0A075B6I4 117 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 HIGD2BQ4VC39 106 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 UBL5Q9BZL1 73 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 LYSTQ99698 3801 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 PANO1I0J062 215 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 PPP1R17O96001 155 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 PRR9Q5T870 116 aa3.19□□□□□ -1.9
TRAPPC11-208ENST00000511955 A0A087WSZ3 146 aa3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 C9orf129Q5T035 196 aaKnown RBP3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 Q8N9P0 234 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 DEFB130BP0DP73 79 aa3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 DEFB130AP0DP74 79 aa3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 HTN3P15516 51 aa3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
TRAPPC11-208ENST00000511955 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 NREPQ16612 68 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 Q6ZR54 194 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 C9orf47Q6ZRZ4 202 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 Q8NAQ8 132 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 LINC00167Q96N53 147 aa3.17□□□□□ -1.9
TRAPPC11-208ENST00000511955 RTL8CO15255 209 aa3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 RPL36ALQ969Q0 106 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 NOP10Q9NPE3 64 aaKnown RBP3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 JMJD7-PLA2G4BH0Y9G9 81 aa3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 KIF25-AS1Q9Y6Z4 181 aa3.16□□□□□ -1.9
TRAPPC11-208ENST00000511955 IGHV3-64A0A075B6Q5 118 aa3.15□□□□□ -1.9
TRAPPC11-208ENST00000511955 TRAV21A0A0B4J279 112 aa3.15□□□□□ -1.9
TRAPPC11-208ENST00000511955 A8MTW9 85 aa3.15□□□□□ -1.9
TRAPPC11-208ENST00000511955 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.9
TRAPPC11-208ENST00000511955 ZNF625Q96I27 306 aaPredicted RBP3.15□□□□□ -1.9
TRAPPC11-208ENST00000511955 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.91
TRAPPC11-208ENST00000511955 DNAH7Q8WXX0 4024 aa3.15□□□□□ -1.91
TRAPPC11-208ENST00000511955 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.15□□□□□ -1.91
TRAPPC11-208ENST00000511955 ORMDL1Q9P0S3 153 aa3.15□□□□□ -1.91
TRAPPC11-208ENST00000511955 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.91
TRAPPC11-208ENST00000511955 TRGV1A0A0A0MS02 117 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 H0YGX0 51 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 NCR3O14931 201 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 SPART-AS1P0CW21 52 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 SPAG11BQ08648 103 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 SPAG11AQ6PDA7 123 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 Q6ZTI0 123 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 SPANXA2-OT1Q8N9U9 137 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 LINC00308Q8TCZ7 52 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 RPL39LQ96EH5 51 aaKnown RBP3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 TRGV2A0A075B6R0 118 aa3.14□□□□□ -1.91
TRAPPC11-208ENST00000511955 DEFB131BA0A096LNP1 70 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 TRBV10-1A0A0K0K1A3 114 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 IGLV7-43P04211 117 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 NDUFA1O15239 70 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 RPL39P62891 51 aaKnown RBP3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 DEFB116Q30KQ4 102 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 TYMSOSQ8TAI1 123 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 KLK12Q9UKR0 248 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 LENEPQ9Y5L5 61 aa3.13□□□□□ -1.91
TRAPPC11-208ENST00000511955 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
TRAPPC11-208ENST00000511955 PLECQ15149 4684 aaKnown RBP3.12□□□□□ -1.91
TRAPPC11-208ENST00000511955 A0A087WYN8 130 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 A0A096LPF7 62 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 LY6G6CO95867 125 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 MGPP08493 103 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 POLR2KP53803 58 aaKnown RBP3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 NUPR2A6NF83 97 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 FAM74A4Q5TZK3 123 aa3.11□□□□□ -1.91
TRAPPC11-208ENST00000511955 TRBV6-5A0A0K0K1A5 114 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 RNASE3P12724 160 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 C9orf163Q8N9P6 203 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 A0A1B0GUV1 79 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 HAMPP81172 84 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 KRTAP26-1Q6PEX3 210 aa3.1□□□□□ -1.91
TRAPPC11-208ENST00000511955 RYR3Q15413 4870 aa3.09□□□□□ -1.91
TRAPPC11-208ENST00000511955 HIGD2AQ9BW72 106 aa3.09□□□□□ -1.92
TRAPPC11-208ENST00000511955 LOC110117498A0A087WWA1 95 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 A0A1B0GU33 70 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 UBE2DNLQ8IWF7 75 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 DEFB104AQ8WTQ1 72 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 FAM168BA1KXE4 195 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 M0R2N4 97 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 APLNQ9ULZ1 77 aa3.08□□□□□ -1.92
TRAPPC11-208ENST00000511955 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 C1orf137Q5JT78 98 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 SMIM11BQ8TCY0 68 aa3.07□□□□□ -1.92
TRAPPC11-208ENST00000511955 PRR34Q9NV39 138 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms