RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 GCN1Q92616 2671 aaKnown RBP-0.31□□□□□ -2.46
SMN2-211ENST00000511873 PIK3C2BO00750 1634 aa-0.31□□□□□ -2.46
SMN2-211ENST00000511873 CICQ96RK0 1608 aaPredicted RBP-0.31□□□□□ -2.46
SMN2-211ENST00000511873 UMAD1C9J7I0 102 aa-0.31□□□□□ -2.46
SMN2-211ENST00000511873 KRTAP20-2Q3LI61 65 aa-0.31□□□□□ -2.46
SMN2-211ENST00000511873 NWD1Q149M9 1564 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 HERC2O95714 4834 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 H3BUT2 72 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 IFI27P40305 119 aaPredicted RBP-0.32□□□□□ -2.46
SMN2-211ENST00000511873 MXRA5Q9NR99 2828 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 DIP2BQ9P265 1576 aa-0.32□□□□□ -2.46
SMN2-211ENST00000511873 CEP295Q9C0D2 2601 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 TNRC18O15417 2968 aaPredicted RBP-0.33□□□□□ -2.46
SMN2-211ENST00000511873 PTPN23Q9H3S7 1636 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 MT4P47944 62 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 PRO3102Q9H379 93 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 ARFGEF2Q9Y6D5 1785 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 SVEP1Q4LDE5 3571 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 ADAMTS12P58397 1594 aa-0.33□□□□□ -2.46
SMN2-211ENST00000511873 TLN1Q9Y490 2541 aaKnown RBP-0.33□□□□□ -2.46
SMN2-211ENST00000511873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.33□□□□□ -2.46
SMN2-211ENST00000511873 CCDC18Q5T9S5 1454 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 FAT1Q14517 4588 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 NESP48681 1621 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 A0A087WXM4 84 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 H0YGG7 62 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 KRTAP6-2Q3LI66 62 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 BIRC6Q9NR09 4857 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 NF1P21359 2839 aa-0.34□□□□□ -2.46
SMN2-211ENST00000511873 NIPBLQ6KC79 2804 aaeCLIP-0.34□□□□□ -2.46
SMN2-211ENST00000511873 SMIM13P0DJ93 91 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 LINC00158P58513 81 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 NREPQ16612 68 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 DEFB121Q5J5C9 76 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 CFAP46Q8IYW2 2715 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 MAGI3Q5TCQ9 1506 aa-0.35□□□□□ -2.47
SMN2-211ENST00000511873 CELSR3Q9NYQ7 3312 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 WDFY4Q6ZS81 3184 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 MYO15AQ9UKN7 3530 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 DEFA5Q01523 94 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 KRTAP19-6Q3LI70 58 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 ATP5EP2Q5VTU8 51 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 ERVK-7P63135 1459 aa-0.36□□□□□ -2.47
SMN2-211ENST00000511873 SCN11AQ9UI33 1791 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 DCAF1Q9Y4B6 1507 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 NDUFA4O00483 81 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 C3orf79P0CE67 100 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 KRTAP19-7Q3SYF9 63 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 BVES-AS1Q5T3Y7 98 aa-0.37□□□□□ -2.47
SMN2-211ENST00000511873 ITPR2Q14571 2701 aa-0.38□□□□□ -2.47
SMN2-211ENST00000511873 DNHD1Q96M86 4753 aa-0.38□□□□□ -2.47
SMN2-211ENST00000511873 WDR87Q6ZQQ6 2873 aa-0.38□□□□□ -2.47
SMN2-211ENST00000511873 LAMA1P25391 3075 aa-0.39□□□□□ -2.47
SMN2-211ENST00000511873 STARD9Q9P2P6 4700 aa-0.39□□□□□ -2.47
SMN2-211ENST00000511873 LCE6AA0A183 80 aa-0.39□□□□□ -2.47
SMN2-211ENST00000511873 SPRR2AP35326 72 aa-0.39□□□□□ -2.47
SMN2-211ENST00000511873 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
SMN2-211ENST00000511873 TEX15Q9BXT5 2789 aa-0.4□□□□□ -2.47
SMN2-211ENST00000511873 FLGP20930 4061 aaPredicted RBP-0.41□□□□□ -2.48
SMN2-211ENST00000511873 H0YAA0 97 aa-0.41□□□□□ -2.48
SMN2-211ENST00000511873 PLCH1Q4KWH8 1693 aa-0.41□□□□□ -2.48
SMN2-211ENST00000511873 ARHGAP35Q9NRY4 1499 aa-0.41□□□□□ -2.48
SMN2-211ENST00000511873 TACC2O95359 2948 aa-0.42□□□□□ -2.48
SMN2-211ENST00000511873 WIZO95785 1651 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 DCHS1Q96JQ0 3298 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 PKHD1P08F94 4074 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 DDX60LQ5H9U9 1706 aaKnown RBP-0.43□□□□□ -2.48
SMN2-211ENST00000511873 RICTORQ6R327 1708 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 PLXNC1O60486 1568 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 HMGA1P17096 107 aaKnown RBP-0.43□□□□□ -2.48
SMN2-211ENST00000511873 C18orf32Q8TCD1 76 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 LAMA5O15230 3695 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 CCDC88BA6NC98 1476 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 CFAP43Q8NDM7 1665 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 MYO9AB2RTY4 2548 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 TLN2Q9Y4G6 2542 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 ABCC1P33527 1531 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 KDM5DQ9BY66 1539 aa-0.43□□□□□ -2.48
SMN2-211ENST00000511873 UNC80Q8N2C7 3258 aa-0.44□□□□□ -2.48
SMN2-211ENST00000511873 LYSTQ99698 3801 aa-0.44□□□□□ -2.48
SMN2-211ENST00000511873 UTP20O75691 2785 aaKnown RBP-0.44□□□□□ -2.48
SMN2-211ENST00000511873 ZZEF1O43149 2961 aa-0.45□□□□□ -2.48
SMN2-211ENST00000511873 A0A0C4DFX4 3053 aa-0.45□□□□□ -2.48
SMN2-211ENST00000511873 SPG11Q96JI7 2443 aa-0.46□□□□□ -2.48
SMN2-211ENST00000511873 DMXL1Q9Y485 3027 aa-0.46□□□□□ -2.48
SMN2-211ENST00000511873 MTORP42345 2549 aa-0.46□□□□□ -2.48
SMN2-211ENST00000511873 SPRR2EP22531 72 aa-0.46□□□□□ -2.48
SMN2-211ENST00000511873 CFAP74Q9C0B2 1584 aa-0.47□□□□□ -2.48
SMN2-211ENST00000511873 DEFB130BP0DP73 79 aa-0.47□□□□□ -2.48
SMN2-211ENST00000511873 DEFB130AP0DP74 79 aa-0.47□□□□□ -2.48
SMN2-211ENST00000511873 DMXL2Q8TDJ6 3036 aa-0.47□□□□□ -2.49
SMN2-211ENST00000511873 DEPDC5O75140 1603 aa-0.48□□□□□ -2.49
SMN2-211ENST00000511873 KRTAP19-8Q3LI54 63 aa-0.48□□□□□ -2.49
SMN2-211ENST00000511873 KALRNO60229 2985 aa-0.48□□□□□ -2.49
SMN2-211ENST00000511873 LYNX1G3V0Z9 82 aa-0.49□□□□□ -2.49
SMN2-211ENST00000511873 H3BNG1 76 aa-0.49□□□□□ -2.49
SMN2-211ENST00000511873 NBEAQ8NFP9 2946 aa-0.49□□□□□ -2.49
SMN2-211ENST00000511873 FAM186AA6NE01 2351 aa-0.49□□□□□ -2.49
SMN2-211ENST00000511873 RRBP1Q9P2E9 1410 aaKnown RBP-0.5□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms