RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CR1P17927 2039 aa3.68□□□□□ -1.82
USP38-203ENST00000511739 MAST4O15021 2626 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 CFAP47Q6ZTR5 3102 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 ATRQ13535 2644 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
USP38-203ENST00000511739 S4R3F8 94 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 A0A1B0GU33 70 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 R4GN34 69 aa3.67□□□□□ -1.82
USP38-203ENST00000511739 USP34Q70CQ2 3546 aa3.66□□□□□ -1.82
USP38-203ENST00000511739 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
USP38-203ENST00000511739 DSPP15924 2871 aaKnown RBP3.66□□□□□ -1.82
USP38-203ENST00000511739 WIPF1O43516 503 aa3.65□□□□□ -1.83
USP38-203ENST00000511739 MGAQ8IWI9 3026 aa3.65□□□□□ -1.83
USP38-203ENST00000511739 FAM229BQ4G0N7 80 aa3.65□□□□□ -1.83
USP38-203ENST00000511739 LCA10Q71F78 164 aa3.65□□□□□ -1.83
USP38-203ENST00000511739 REV3LO60673 3130 aa3.64□□□□□ -1.83
USP38-203ENST00000511739 A0A1W2PNM2 257 aa3.64□□□□□ -1.83
USP38-203ENST00000511739 Q5VSD8 79 aa3.64□□□□□ -1.83
USP38-203ENST00000511739 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
USP38-203ENST00000511739 GCN1Q92616 2671 aaKnown RBP3.64□□□□□ -1.83
USP38-203ENST00000511739 DMXL1Q9Y485 3027 aa3.64□□□□□ -1.83
USP38-203ENST00000511739 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
USP38-203ENST00000511739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.63□□□□□ -1.83
USP38-203ENST00000511739 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
USP38-203ENST00000511739 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
USP38-203ENST00000511739 CFAP46Q8IYW2 2715 aa3.63□□□□□ -1.83
USP38-203ENST00000511739 MYO15AQ9UKN7 3530 aa3.62□□□□□ -1.83
USP38-203ENST00000511739 STAB1Q9NY15 2570 aa3.62□□□□□ -1.83
USP38-203ENST00000511739 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
USP38-203ENST00000511739 AKAP13Q12802 2813 aa3.62□□□□□ -1.83
USP38-203ENST00000511739 ITPR3Q14573 2671 aa3.62□□□□□ -1.83
USP38-203ENST00000511739 TEP1Q99973 2627 aaKnown RBP3.62□□□□□ -1.83
USP38-203ENST00000511739 FRYQ5TBA9 3013 aa3.62□□□□□ -1.83
USP38-203ENST00000511739 DMAC1Q96GE9 116 aa3.61□□□□□ -1.83
USP38-203ENST00000511739 EIF4EBP3O60516 100 aaPredicted RBP3.6□□□□□ -1.83
USP38-203ENST00000511739 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
USP38-203ENST00000511739 CELSR3Q9NYQ7 3312 aa3.59□□□□□ -1.83
USP38-203ENST00000511739 H7BZZ5 65 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 FRYLO94915 3013 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 LCE6AA0A183 80 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 OXTP01178 125 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 SPINK7P58062 85 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 IGSF10Q6WRI0 2623 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 UNC79Q9P2D8 2635 aa3.58□□□□□ -1.84
USP38-203ENST00000511739 H1FX-AS1Q4G0G2 97 aa3.57□□□□□ -1.84
USP38-203ENST00000511739 M0QZ58 72 aa3.57□□□□□ -1.84
USP38-203ENST00000511739 LAMA1P25391 3075 aa3.57□□□□□ -1.84
USP38-203ENST00000511739 DCHS1Q96JQ0 3298 aa3.56□□□□□ -1.84
USP38-203ENST00000511739 DNAH14Q0VDD8 3507 aa3.56□□□□□ -1.84
USP38-203ENST00000511739 DMXL2Q8TDJ6 3036 aa3.55□□□□□ -1.84
USP38-203ENST00000511739 CENPEQ02224 2701 aa3.55□□□□□ -1.84
USP38-203ENST00000511739 Q8N9P0 234 aaPredicted RBP3.54□□□□□ -1.84
USP38-203ENST00000511739 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
USP38-203ENST00000511739 Q5W150 140 aa3.51□□□□□ -1.85
USP38-203ENST00000511739 ASPMQ8IZT6 3477 aa3.51□□□□□ -1.85
USP38-203ENST00000511739 DMDP11532 3685 aa3.51□□□□□ -1.85
USP38-203ENST00000511739 RPL37P61927 97 aaKnown RBP3.5□□□□□ -1.85
USP38-203ENST00000511739 MMP24-AS1A0A0U1RRL7 71 aa3.5□□□□□ -1.85
USP38-203ENST00000511739 KRTAP10-1P60331 282 aa3.5□□□□□ -1.85
USP38-203ENST00000511739 OCR1Q9BZK8 76 aa3.5□□□□□ -1.85
USP38-203ENST00000511739 FREM2Q5SZK8 3169 aa3.5□□□□□ -1.85
USP38-203ENST00000511739 KMT2BQ9UMN6 2715 aaPredicted RBP3.49□□□□□ -1.85
USP38-203ENST00000511739 COL12A1Q99715 3063 aa3.48□□□□□ -1.85
USP38-203ENST00000511739 ADM2Q7Z4H4 148 aa3.48□□□□□ -1.85
USP38-203ENST00000511739 Q75L30 129 aa3.47□□□□□ -1.85
USP38-203ENST00000511739 KRTAP10-2P60368 255 aa3.47□□□□□ -1.85
USP38-203ENST00000511739 SPEGQ15772 3267 aa3.47□□□□□ -1.85
USP38-203ENST00000511739 TEX15Q9BXT5 2789 aa3.47□□□□□ -1.85
USP38-203ENST00000511739 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
USP38-203ENST00000511739 ROMO1P60602 79 aa3.46□□□□□ -1.86
USP38-203ENST00000511739 DMBT1Q9UGM3 2413 aaPredicted RBP3.46□□□□□ -1.86
USP38-203ENST00000511739 SPRR1AP35321 89 aa3.45□□□□□ -1.86
USP38-203ENST00000511739 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
USP38-203ENST00000511739 ASH1LQ9NR48 2969 aaKnown RBP3.45□□□□□ -1.86
USP38-203ENST00000511739 FLNCQ14315 2725 aa3.45□□□□□ -1.86
USP38-203ENST00000511739 ZZEF1O43149 2961 aa3.44□□□□□ -1.86
USP38-203ENST00000511739 SPRR1BP22528 89 aa3.44□□□□□ -1.86
USP38-203ENST00000511739 UBR5O95071 2799 aaPredicted RBP3.44□□□□□ -1.86
USP38-203ENST00000511739 STAB2Q8WWQ8 2551 aa3.44□□□□□ -1.86
USP38-203ENST00000511739 KALRNO60229 2985 aa3.44□□□□□ -1.86
USP38-203ENST00000511739 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
USP38-203ENST00000511739 ADGRG4Q8IZF6 3080 aa3.43□□□□□ -1.86
USP38-203ENST00000511739 LINC00472Q9H8W2 130 aa3.43□□□□□ -1.86
USP38-203ENST00000511739 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
USP38-203ENST00000511739 LAMA5O15230 3695 aa3.42□□□□□ -1.86
USP38-203ENST00000511739 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
USP38-203ENST00000511739 LOC400499M0QZD8 3231 aa3.42□□□□□ -1.86
USP38-203ENST00000511739 Q8NDZ9 215 aa3.41□□□□□ -1.86
USP38-203ENST00000511739 NBEAQ8NFP9 2946 aa3.41□□□□□ -1.86
USP38-203ENST00000511739 PANO1I0J062 215 aa3.4□□□□□ -1.87
USP38-203ENST00000511739 C20orf166-AS1Q96NR2 134 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 NBEAL1Q6ZS30 2694 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 MAP1AP78559 2803 aaPredicted RBP3.39□□□□□ -1.87
USP38-203ENST00000511739 ATMQ13315 3056 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 SMG1Q96Q15 3661 aaKnown RBP3.39□□□□□ -1.87
USP38-203ENST00000511739 ITPR1Q14643 2758 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 Q6ZR54 194 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
USP38-203ENST00000511739 UTP20O75691 2785 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms