RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 INSP01308 110 aa3.33□□□□□ -1.88
GYPB-212ENST00000511198 CMC4P56277 68 aaPredicted RBP3.33□□□□□ -1.88
GYPB-212ENST00000511198 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
GYPB-212ENST00000511198 LINC00242Q5T6M2 205 aa3.33□□□□□ -1.88
GYPB-212ENST00000511198 SOSTDC1Q6X4U4 206 aa3.33□□□□□ -1.88
GYPB-212ENST00000511198 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
GYPB-212ENST00000511198 C22orf24Q9Y442 160 aa3.33□□□□□ -1.88
GYPB-212ENST00000511198 IGHV3-73A0A0B4J1V6 119 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 F5H768 121 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 BCE1O60756 84 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 DEFB131AP59861 70 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 FAM19A5Q7Z5A7 132 aaPredicted RBP3.32□□□□□ -1.88
GYPB-212ENST00000511198 STHQ8IWL8 128 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
GYPB-212ENST00000511198 TRBV10-3A0A0K0K1G6 114 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 hADV29S1A0JD25 119 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 NDUFC2O95298 119 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 DAD1P61803 113 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 COX6A2Q02221 97 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 Q6ZVQ6 151 aa3.31□□□□□ -1.88
GYPB-212ENST00000511198 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 KNCNA6PVL3 124 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 JMJD7-PLA2G4BH0Y9G9 81 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 SND1-IT1Q9HBX3 110 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 CDC42SE2Q9NRR3 84 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 ANAPC11Q9NYG5 84 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 ORMDL1Q9P0S3 153 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 XCL2Q9UBD3 114 aa3.3□□□□□ -1.88
GYPB-212ENST00000511198 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 IGKV2-28A0A075B6P5 120 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 LOC107984640A0A0U1RRK4 108 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 UBE2L6O14933 153 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 IGKV2D-28P01615 120 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 CCKP06307 115 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 LINC00337Q8N6G1 96 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 DPH3Q96FX2 82 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 C14orf132Q9NPU4 83 aa3.29□□□□□ -1.88
GYPB-212ENST00000511198 TRAV13-1A0A0B4J241 112 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 A0A0U1RRA0 63 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 H3BQ85 93 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 LYPD5Q6UWN5 251 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 Q9HAA7 133 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 LINC00846Q9NV44 126 aa3.28□□□□□ -1.88
GYPB-212ENST00000511198 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 TMEM256-PLSCR3K7ERE1 68 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 LECT2O14960 151 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 HTN1P15515 57 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 LINC00158P58513 81 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 NTM-AS1Q6ZSK4 140 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 Q9UF83 564 aa3.27□□□□□ -1.89
GYPB-212ENST00000511198 TRGV1A0A0A0MS02 117 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 ATP5EP56381 51 aaPredicted RBP3.26□□□□□ -1.89
GYPB-212ENST00000511198 PRR4Q16378 134 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 UBL5Q9BZL1 73 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
GYPB-212ENST00000511198 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 LOC110117498A0A087WWA1 95 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 IGHV3OR16-9A0A0B4J2B5 98 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 NCR3O14931 201 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 SS18Q15532 418 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 Q8IZM0 81 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 C1orf158Q8N1D5 194 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 C16orf74Q96GX8 76 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 TOMM7Q9P0U1 55 aa3.25□□□□□ -1.89
GYPB-212ENST00000511198 A0A087WVE0 104 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 NDUFC1O43677 76 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 PDE6GP18545 87 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 COX17Q14061 63 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 C9orf129Q5T035 196 aaKnown RBP3.24□□□□□ -1.89
GYPB-212ENST00000511198 Q5XG85 94 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 DSCR8Q96T75 97 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
GYPB-212ENST00000511198 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.23□□□□□ -1.89
GYPB-212ENST00000511198 TRBV6-8A0A0A6YYG3 113 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 PSCAO43653 123 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 PRM2P04554 102 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 XCL1P47992 114 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 CXCL6P80162 114 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 KLKP1Q107X0 134 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 Q6ZTI0 123 aa3.23□□□□□ -1.89
GYPB-212ENST00000511198 TRAV23DV6A0A075B6W5 121 aa3.22□□□□□ -1.89
GYPB-212ENST00000511198 LINC00959A0A1B0GUT2 108 aa3.22□□□□□ -1.89
GYPB-212ENST00000511198 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
GYPB-212ENST00000511198 Q6ZQT0 140 aa3.22□□□□□ -1.89
GYPB-212ENST00000511198 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
GYPB-212ENST00000511198 KMT2DO14686 5537 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms