RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 HIST1H2BKO60814 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BJP06899 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BOP23527 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BBP33778 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BDP58876 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BCP62807 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST2H2BEQ16778 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.41□□□□□ -1.7
TRIO-217ENST00000511019 Q6ZVH6 145 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 MUSTN1Q8IVN3 82 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BHQ93079 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BNQ99877 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 HIST1H2BMQ99879 126 aa4.41□□□□□ -1.7
TRIO-217ENST00000511019 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
TRIO-217ENST00000511019 SLC7A5P1Q8MH63 180 aa4.4□□□□□ -1.71
TRIO-217ENST00000511019 TRAV13-2A0A0B4J235 113 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 F8WEM9 126 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 KRTDAPP60985 99 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 VAMP3Q15836 100 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 Q6Q795 121 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 ATP11AUNQ6ZP68 121 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 PCP2Q8IVA1 136 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 SMIM11BQ8TCY0 68 aa4.39□□□□□ -1.71
TRIO-217ENST00000511019 C20orf202A1L168 122 aa4.37□□□□□ -1.71
TRIO-217ENST00000511019 Q6JHZ5 121 aa4.36□□□□□ -1.71
TRIO-217ENST00000511019 TRBV7-7A0A0K0K1E9 115 aa4.35□□□□□ -1.71
TRIO-217ENST00000511019 hADV29S1A0JD25 119 aa4.35□□□□□ -1.71
TRIO-217ENST00000511019 OCIAD2Q56VL3 154 aa4.35□□□□□ -1.71
TRIO-217ENST00000511019 LINC00575Q6W349 94 aa4.35□□□□□ -1.71
TRIO-217ENST00000511019 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
TRIO-217ENST00000511019 KRTAP23-1A1A580 65 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 COA6Q5JTJ3 125 aaKnown RBP4.34□□□□□ -1.71
TRIO-217ENST00000511019 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 Q6ZQY7 126 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 Q75L30 129 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 CLEC2BQ92478 149 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 OBSCN-AS1Q96MR7 158 aa4.34□□□□□ -1.71
TRIO-217ENST00000511019 SNRPEP62304 92 aaKnown RBP4.33□□□□□ -1.72
TRIO-217ENST00000511019 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
TRIO-217ENST00000511019 LST1O00453 97 aa4.32□□□□□ -1.72
TRIO-217ENST00000511019 Q96NJ1 140 aa4.32□□□□□ -1.72
TRIO-217ENST00000511019 SNHG12Q9BXW3 62 aa4.32□□□□□ -1.72
TRIO-217ENST00000511019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.31□□□□□ -1.72
TRIO-217ENST00000511019 SCGB1D1O95968 90 aa4.3□□□□□ -1.72
TRIO-217ENST00000511019 CFC1P0CG37 223 aa4.3□□□□□ -1.72
TRIO-217ENST00000511019 PPDPFLQ8WWR9 84 aa4.3□□□□□ -1.72
TRIO-217ENST00000511019 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
TRIO-217ENST00000511019 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
TRIO-217ENST00000511019 BVES-AS1Q5T3Y7 98 aa4.28□□□□□ -1.72
TRIO-217ENST00000511019 HSBP1L1C9JCN9 74 aa4.27□□□□□ -1.73
TRIO-217ENST00000511019 H3BUT2 72 aa4.27□□□□□ -1.73
TRIO-217ENST00000511019 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
TRIO-217ENST00000511019 KRTAP9-8Q9BYQ0 159 aa4.27□□□□□ -1.73
TRIO-217ENST00000511019 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
TRIO-217ENST00000511019 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
TRIO-217ENST00000511019 TRIAP1O43715 76 aa4.26□□□□□ -1.73
TRIO-217ENST00000511019 SNCGO76070 127 aa4.26□□□□□ -1.73
TRIO-217ENST00000511019 C12orf57Q99622 126 aa4.26□□□□□ -1.73
TRIO-217ENST00000511019 A8MUU9 505 aa4.25□□□□□ -1.73
TRIO-217ENST00000511019 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
TRIO-217ENST00000511019 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
TRIO-217ENST00000511019 HIST1H4GQ99525 98 aa4.24□□□□□ -1.73
TRIO-217ENST00000511019 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
TRIO-217ENST00000511019 S100A2P29034 98 aa4.23□□□□□ -1.73
TRIO-217ENST00000511019 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
TRIO-217ENST00000511019 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
TRIO-217ENST00000511019 A0A087WSZ3 146 aa4.22□□□□□ -1.73
TRIO-217ENST00000511019 H0YGX0 51 aa4.22□□□□□ -1.73
TRIO-217ENST00000511019 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 H3BMG7 143 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 DSCR10P59022 87 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 HIST3H2BBQ8N257 126 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 HIST1H2BLQ99880 126 aa4.21□□□□□ -1.74
TRIO-217ENST00000511019 LINC00313P59037 77 aa4.2□□□□□ -1.74
TRIO-217ENST00000511019 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
TRIO-217ENST00000511019 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
TRIO-217ENST00000511019 FABP2P12104 132 aa4.19□□□□□ -1.74
TRIO-217ENST00000511019 RBM12B-AS1Q9P1G2 102 aa4.19□□□□□ -1.74
TRIO-217ENST00000511019 MT2AP02795 61 aa4.18□□□□□ -1.74
TRIO-217ENST00000511019 COX8AP10176 69 aa4.18□□□□□ -1.74
TRIO-217ENST00000511019 SIGMAR1Q99720 223 aa4.18□□□□□ -1.74
TRIO-217ENST00000511019 A0A1B0GX51 115 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 DLEU1O43261 78 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 IGKV4-1P06312 121 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 S100A6P06703 90 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 USH2AO75445 5202 aa4.17□□□□□ -1.74
TRIO-217ENST00000511019 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
TRIO-217ENST00000511019 A0A0B4J2C4 111 aa4.16□□□□□ -1.74
TRIO-217ENST00000511019 A0A1W2PNM2 257 aa4.16□□□□□ -1.74
TRIO-217ENST00000511019 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
TRIO-217ENST00000511019 ANKRD29Q8N6D5 301 aa4.16□□□□□ -1.74
TRIO-217ENST00000511019 TRBV7-4A0A0J9YYF1 115 aa4.14□□□□□ -1.75
TRIO-217ENST00000511019 MT1FP04733 61 aa4.14□□□□□ -1.75
TRIO-217ENST00000511019 C14orf144Q96I85 54 aa4.14□□□□□ -1.75
TRIO-217ENST00000511019 HIGD1BQ9P298 99 aa4.14□□□□□ -1.75
TRIO-217ENST00000511019 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
TRIO-217ENST00000511019 HRES1P13985 223 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms