RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 VPS13DQ5THJ4 4388 aa6.14□□□□□ -1.43
USP53-207ENST00000510852 LELP1Q5T871 98 aa6.14□□□□□ -1.43
USP53-207ENST00000510852 APLNQ9ULZ1 77 aa6.14□□□□□ -1.43
USP53-207ENST00000510852 Q8N1X5 172 aa6.14□□□□□ -1.43
USP53-207ENST00000510852 DNAH1Q9P2D7 4330 aa6.13□□□□□ -1.43
USP53-207ENST00000510852 CFC1P0CG37 223 aa6.13□□□□□ -1.43
USP53-207ENST00000510852 LRCOL1A6NCL2 159 aa6.12□□□□□ -1.43
USP53-207ENST00000510852 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
USP53-207ENST00000510852 IGIPA6NJ69 53 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 H3BPC8 53 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 CCL18P55774 89 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 Q6ZR54 194 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
USP53-207ENST00000510852 WFDC10BQ8IUB3 73 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 C22orf24Q9Y442 160 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 TENM2Q9NT68 2774 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 A0A087WSZ3 146 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 Q8N3U1 123 aa6.1□□□□□ -1.43
USP53-207ENST00000510852 LINC00483Q53H64 154 aa6.09□□□□□ -1.43
USP53-207ENST00000510852 SMIM29Q86T20 159 aa6.09□□□□□ -1.43
USP53-207ENST00000510852 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
USP53-207ENST00000510852 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
USP53-207ENST00000510852 A0A1B0GUV1 79 aa6.08□□□□□ -1.44
USP53-207ENST00000510852 NDUFAF8A1L188 74 aa6.08□□□□□ -1.44
USP53-207ENST00000510852 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
USP53-207ENST00000510852 ALMS1Q8TCU4 4167 aa6.08□□□□□ -1.44
USP53-207ENST00000510852 UBE2DNLQ8IWF7 75 aa6.08□□□□□ -1.44
USP53-207ENST00000510852 IGHV3-30P01768 117 aa6.07□□□□□ -1.44
USP53-207ENST00000510852 IGHV3-30-5P0DP03 117 aa6.07□□□□□ -1.44
USP53-207ENST00000510852 IGLV10-54A0A075B6I4 117 aa6.07□□□□□ -1.44
USP53-207ENST00000510852 PANO1I0J062 215 aa6.07□□□□□ -1.44
USP53-207ENST00000510852 AMELXQ99217 191 aa6.07□□□□□ -1.44
USP53-207ENST00000510852 LINC01556Q5JQF7 62 aa6.06□□□□□ -1.44
USP53-207ENST00000510852 A0A1W2PNM2 257 aa6.06□□□□□ -1.44
USP53-207ENST00000510852 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
USP53-207ENST00000510852 DNAH6Q9C0G6 4158 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 TRAV12-1A0A0B4J245 112 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 LINC00167Q96N53 147 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 H3BQ85 93 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 CLPSL2Q6UWE3 100 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
USP53-207ENST00000510852 DNAL4O96015 105 aa6.04□□□□□ -1.44
USP53-207ENST00000510852 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
USP53-207ENST00000510852 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
USP53-207ENST00000510852 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.03□□□□□ -1.44
USP53-207ENST00000510852 Q8N377 158 aa6.03□□□□□ -1.44
USP53-207ENST00000510852 DNAH10Q8IVF4 4471 aa6.03□□□□□ -1.44
USP53-207ENST00000510852 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
USP53-207ENST00000510852 PRR34Q9NV39 138 aa6.03□□□□□ -1.44
USP53-207ENST00000510852 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
USP53-207ENST00000510852 LINC00959A0A1B0GUT2 108 aa6.02□□□□□ -1.45
USP53-207ENST00000510852 F8VRH5 84 aa6.02□□□□□ -1.45
USP53-207ENST00000510852 LINC00846Q9NV44 126 aa6.02□□□□□ -1.45
USP53-207ENST00000510852 DNAH2Q9P225 4427 aa6.02□□□□□ -1.45
USP53-207ENST00000510852 IGLV7-46A0A075B6I9 117 aa6.01□□□□□ -1.45
USP53-207ENST00000510852 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
USP53-207ENST00000510852 LY6G6CO95867 125 aa6□□□□□ -1.45
USP53-207ENST00000510852 PLNP26678 52 aa6□□□□□ -1.45
USP53-207ENST00000510852 COX6A2Q02221 97 aa6□□□□□ -1.45
USP53-207ENST00000510852 HYDINQ4G0P3 5121 aa6□□□□□ -1.45
USP53-207ENST00000510852 Q1RN00 199 aa5.99□□□□□ -1.45
USP53-207ENST00000510852 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
USP53-207ENST00000510852 NBDYA0A0U1RRE5 68 aa5.99□□□□□ -1.45
USP53-207ENST00000510852 KRTAP26-1Q6PEX3 210 aa5.99□□□□□ -1.45
USP53-207ENST00000510852 CDKN2A-AS1Q9UH64 79 aa5.98□□□□□ -1.45
USP53-207ENST00000510852 IGKV2D-24A0A075B6R9 120 aa5.97□□□□□ -1.45
USP53-207ENST00000510852 M0R2N4 97 aa5.97□□□□□ -1.45
USP53-207ENST00000510852 LCE2BO14633 110 aa5.97□□□□□ -1.45
USP53-207ENST00000510852 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
USP53-207ENST00000510852 SPAG11AQ6PDA7 123 aa5.96□□□□□ -1.46
USP53-207ENST00000510852 ELOF1P60002 83 aaKnown RBP5.95□□□□□ -1.46
USP53-207ENST00000510852 NREPQ16612 68 aa5.95□□□□□ -1.46
USP53-207ENST00000510852 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
USP53-207ENST00000510852 KMT2CQ8NEZ4 4911 aaKnown RBP5.94□□□□□ -1.46
USP53-207ENST00000510852 FRAS1Q86XX4 4008 aa5.94□□□□□ -1.46
USP53-207ENST00000510852 IGHV3-64A0A075B6Q5 118 aa5.94□□□□□ -1.46
USP53-207ENST00000510852 RYR2Q92736 4967 aa5.93□□□□□ -1.46
USP53-207ENST00000510852 C9orf129Q5T035 196 aaKnown RBP5.92□□□□□ -1.46
USP53-207ENST00000510852 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
USP53-207ENST00000510852 LCE6AA0A183 80 aa5.91□□□□□ -1.46
USP53-207ENST00000510852 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
USP53-207ENST00000510852 C9orf163Q8N9P6 203 aa5.9□□□□□ -1.46
USP53-207ENST00000510852 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.47
USP53-207ENST00000510852 TOMM7Q9P0U1 55 aa5.9□□□□□ -1.47
USP53-207ENST00000510852 FAT2Q9NYQ8 4349 aa5.9□□□□□ -1.47
USP53-207ENST00000510852 COX7B2Q8TF08 81 aa5.89□□□□□ -1.47
USP53-207ENST00000510852 Q9BRP9 147 aa5.89□□□□□ -1.47
USP53-207ENST00000510852 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
USP53-207ENST00000510852 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
USP53-207ENST00000510852 Q8IZM0 81 aa5.88□□□□□ -1.47
USP53-207ENST00000510852 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
USP53-207ENST00000510852 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
USP53-207ENST00000510852 GVQW2A0A096LPI5 108 aaPredicted RBP5.87□□□□□ -1.47
USP53-207ENST00000510852 C1orf137Q5JT78 98 aa5.87□□□□□ -1.47
USP53-207ENST00000510852 PLAC8Q9NZF1 115 aa5.87□□□□□ -1.47
USP53-207ENST00000510852 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms