RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 Q6ZQY7 126 aa14.31□□□□□ -0.12
SNF8-208ENST00000510195 RPL37P61927 97 aaKnown RBP14.29□□□□□ -0.12
SNF8-208ENST00000510195 S100A6P06703 90 aa14.26□□□□□ -0.13
SNF8-208ENST00000510195 PPDPFLQ8WWR9 84 aa14.26□□□□□ -0.13
SNF8-208ENST00000510195 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
SNF8-208ENST00000510195 MT1HP80294 61 aa14.25□□□□□ -0.13
SNF8-208ENST00000510195 BVES-AS1Q5T3Y7 98 aa14.25□□□□□ -0.13
SNF8-208ENST00000510195 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.25□□□□□ -0.13
SNF8-208ENST00000510195 OCIAD2Q56VL3 154 aa14.23□□□□□ -0.13
SNF8-208ENST00000510195 TRBV7-7A0A0K0K1E9 115 aa14.22□□□□□ -0.13
SNF8-208ENST00000510195 CFC1BP0CG36 223 aa14.22□□□□□ -0.13
SNF8-208ENST00000510195 HIST1H4GQ99525 98 aa14.22□□□□□ -0.13
SNF8-208ENST00000510195 IGFL1Q6UW32 110 aa14.21□□□□□ -0.13
SNF8-208ENST00000510195 S100A1P23297 94 aa14.19□□□□□ -0.14
SNF8-208ENST00000510195 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
SNF8-208ENST00000510195 COX8AP10176 69 aa14.17□□□□□ -0.14
SNF8-208ENST00000510195 SNHG12Q9BXW3 62 aa14.16□□□□□ -0.14
SNF8-208ENST00000510195 DLEU1O43261 78 aa14.15□□□□□ -0.14
SNF8-208ENST00000510195 C12orf57Q99622 126 aa14.15□□□□□ -0.14
SNF8-208ENST00000510195 SNCGO76070 127 aa14.1□□□□□ -0.15
SNF8-208ENST00000510195 H0YGX0 51 aa14.06□□□□□ -0.16
SNF8-208ENST00000510195 CFC1P0CG37 223 aa14.06□□□□□ -0.16
SNF8-208ENST00000510195 LST1O00453 97 aa14.05□□□□□ -0.16
SNF8-208ENST00000510195 COX6B2Q6YFQ2 88 aa14.05□□□□□ -0.16
SNF8-208ENST00000510195 FLGP20930 4061 aaPredicted RBP14.04□□□□□ -0.16
SNF8-208ENST00000510195 Q6Q795 121 aa14.04□□□□□ -0.16
SNF8-208ENST00000510195 Q75L30 129 aa14.04□□□□□ -0.16
SNF8-208ENST00000510195 RAB37Q96AX2 223 aa14.04□□□□□ -0.16
SNF8-208ENST00000510195 HIGD1BQ9P298 99 aa14.04□□□□□ -0.16
SNF8-208ENST00000510195 LORP23490 312 aaPredicted RBP14.03□□□□□ -0.16
SNF8-208ENST00000510195 FSIP2Q5CZC0 6907 aa14.03□□□□□ -0.16
SNF8-208ENST00000510195 A0A0B4J2C4 111 aa14.02□□□□□ -0.17
SNF8-208ENST00000510195 H3BUT2 72 aa14.02□□□□□ -0.17
SNF8-208ENST00000510195 KRTAP10-6P60371 365 aaPredicted RBP14.02□□□□□ -0.17
SNF8-208ENST00000510195 ATP11AUNQ6ZP68 121 aa14.02□□□□□ -0.17
SNF8-208ENST00000510195 OBSCN-AS1Q96MR7 158 aa14.02□□□□□ -0.17
SNF8-208ENST00000510195 SS18L2Q9UHA2 77 aa14.02□□□□□ -0.17
SNF8-208ENST00000510195 CRCT1Q9UGL9 99 aa14□□□□□ -0.17
SNF8-208ENST00000510195 M0R2T5 61 aa13.99□□□□□ -0.17
SNF8-208ENST00000510195 C14orf144Q96I85 54 aa13.99□□□□□ -0.17
SNF8-208ENST00000510195 GHRHP01286 108 aa13.97□□□□□ -0.17
SNF8-208ENST00000510195 TEN1Q86WV5 123 aa13.97□□□□□ -0.17
SNF8-208ENST00000510195 NDUFV3P56181 108 aaKnown RBP13.96□□□□□ -0.17
SNF8-208ENST00000510195 A0A1B0GX51 115 aa13.94□□□□□ -0.18
SNF8-208ENST00000510195 SPATA45Q537H7 98 aa13.94□□□□□ -0.18
SNF8-208ENST00000510195 PAM16Q9Y3D7 125 aa13.94□□□□□ -0.18
SNF8-208ENST00000510195 FAM218AQ96MZ4 157 aa13.93□□□□□ -0.18
SNF8-208ENST00000510195 C2orf91Q6ZV80 131 aa13.9□□□□□ -0.18
SNF8-208ENST00000510195 Q96NJ1 140 aa13.9□□□□□ -0.18
SNF8-208ENST00000510195 VAMP8Q9BV40 100 aa13.9□□□□□ -0.18
SNF8-208ENST00000510195 TMEM238LA0A1B0GVL6 79 aa13.89□□□□□ -0.19
SNF8-208ENST00000510195 A6NJY4 79 aa13.89□□□□□ -0.19
SNF8-208ENST00000510195 CEND1Q8N111 149 aa13.88□□□□□ -0.19
SNF8-208ENST00000510195 PRO1854Q9UHT4 67 aa13.88□□□□□ -0.19
SNF8-208ENST00000510195 H3BMG7 143 aa13.86□□□□□ -0.19
SNF8-208ENST00000510195 C20orf166-AS1Q96NR2 134 aa13.85□□□□□ -0.19
SNF8-208ENST00000510195 A0A087WSZ3 146 aa13.84□□□□□ -0.19
SNF8-208ENST00000510195 A8MUU9 505 aa13.81□□□□□ -0.2
SNF8-208ENST00000510195 FABP2P12104 132 aa13.81□□□□□ -0.2
SNF8-208ENST00000510195 H3BQ85 93 aa13.76□□□□□ -0.21
SNF8-208ENST00000510195 FXYD2P54710 66 aa13.76□□□□□ -0.21
SNF8-208ENST00000510195 TRIAP1O43715 76 aa13.75□□□□□ -0.21
SNF8-208ENST00000510195 A0A1W2PNM2 257 aa13.73□□□□□ -0.21
SNF8-208ENST00000510195 DNAL4O96015 105 aa13.71□□□□□ -0.21
SNF8-208ENST00000510195 TRBV7-4A0A0J9YYF1 115 aa13.7□□□□□ -0.22
SNF8-208ENST00000510195 ANKRD29Q8N6D5 301 aa13.69□□□□□ -0.22
SNF8-208ENST00000510195 ORMDL1Q9P0S3 153 aa13.69□□□□□ -0.22
SNF8-208ENST00000510195 TRBV20-1A0A075B6N2 111 aa13.67□□□□□ -0.22
SNF8-208ENST00000510195 TMEM256-PLSCR3K7ERE1 68 aa13.66□□□□□ -0.22
SNF8-208ENST00000510195 DSCR10P59022 87 aa13.66□□□□□ -0.22
SNF8-208ENST00000510195 SIGMAR1Q99720 223 aa13.66□□□□□ -0.22
SNF8-208ENST00000510195 HSD52Q0P140 79 aa13.65□□□□□ -0.22
SNF8-208ENST00000510195 COX6CP09669 75 aa13.64□□□□□ -0.23
SNF8-208ENST00000510195 LINC00313P59037 77 aa13.64□□□□□ -0.23
SNF8-208ENST00000510195 PSMB2P49721 201 aa13.63□□□□□ -0.23
SNF8-208ENST00000510195 IGKV4-1P06312 121 aa13.61□□□□□ -0.23
SNF8-208ENST00000510195 PYY3Q5JQD4 70 aa13.57□□□□□ -0.24
SNF8-208ENST00000510195 KRTAP16-1A8MUX0 517 aa13.55□□□□□ -0.24
SNF8-208ENST00000510195 K7ERJ3 54 aa13.55□□□□□ -0.24
SNF8-208ENST00000510195 UBE2V1Q13404 147 aa13.55□□□□□ -0.24
SNF8-208ENST00000510195 LINC00472Q9H8W2 130 aa13.55□□□□□ -0.24
SNF8-208ENST00000510195 CCKP06307 115 aa13.54□□□□□ -0.24
SNF8-208ENST00000510195 TRACP01848 142 aa13.53□□□□□ -0.24
SNF8-208ENST00000510195 A0A1B0GV72 72 aa13.52□□□□□ -0.25
SNF8-208ENST00000510195 KRTAP9-8Q9BYQ0 159 aa13.47□□□□□ -0.25
SNF8-208ENST00000510195 UQCR10Q9UDW1 63 aa13.47□□□□□ -0.25
SNF8-208ENST00000510195 DEFB116Q30KQ4 102 aa13.46□□□□□ -0.25
SNF8-208ENST00000510195 NOTCH2NLQ7Z3S9 236 aa13.46□□□□□ -0.25
SNF8-208ENST00000510195 IGHV6-1A0A0B4J1U7 121 aa13.43□□□□□ -0.26
SNF8-208ENST00000510195 RBM3P98179 157 aaKnown RBP13.43□□□□□ -0.26
SNF8-208ENST00000510195 FAM236DA0A1B0GTK5 79 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 SCGB1C2P0DMR2 95 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 FAM236CP0DP71 79 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 C21orf62-AS1Q17RA5 79 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 MPLKIPQ8TAP9 179 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 DSCR8Q96T75 97 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 RBM12B-AS1Q9P1G2 102 aa13.4□□□□□ -0.26
SNF8-208ENST00000510195 C8orf87E5RJ46 101 aa13.39□□□□□ -0.27
SNF8-208ENST00000510195 A0A1B0GVX0 72 aa13.37□□□□□ -0.27
SNF8-208ENST00000510195 VPS25Q9BRG1 176 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms