RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ATOH7Q8N100 152 aa6.82□□□□□ -1.32
DDX41-210ENST00000509576 LCE2BO14633 110 aa6.81□□□□□ -1.32
DDX41-210ENST00000509576 IFITM1P13164 125 aa6.81□□□□□ -1.32
DDX41-210ENST00000509576 LINC00575Q6W349 94 aa6.81□□□□□ -1.32
DDX41-210ENST00000509576 SCGB1D4Q6XE38 83 aa6.81□□□□□ -1.32
DDX41-210ENST00000509576 MT2AP02795 61 aa6.8□□□□□ -1.32
DDX41-210ENST00000509576 A4D1N5 150 aa6.79□□□□□ -1.32
DDX41-210ENST00000509576 KRTDAPP60985 99 aa6.79□□□□□ -1.32
DDX41-210ENST00000509576 Q6ZQY7 126 aa6.79□□□□□ -1.32
DDX41-210ENST00000509576 CLEC2BQ92478 149 aa6.78□□□□□ -1.32
DDX41-210ENST00000509576 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
DDX41-210ENST00000509576 MT1FP04733 61 aa6.77□□□□□ -1.33
DDX41-210ENST00000509576 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
DDX41-210ENST00000509576 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
DDX41-210ENST00000509576 Q6ZVH6 145 aa6.76□□□□□ -1.33
DDX41-210ENST00000509576 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
DDX41-210ENST00000509576 C20orf166-AS1Q96NR2 134 aa6.76□□□□□ -1.33
DDX41-210ENST00000509576 NHP2Q9NX24 153 aaKnown RBP6.76□□□□□ -1.33
DDX41-210ENST00000509576 TRAV13-2A0A0B4J235 113 aa6.75□□□□□ -1.33
DDX41-210ENST00000509576 CFC1P0CG37 223 aa6.75□□□□□ -1.33
DDX41-210ENST00000509576 OCIAD2Q56VL3 154 aa6.75□□□□□ -1.33
DDX41-210ENST00000509576 A8MUU9 505 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 F8WEM9 126 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 H3BUT2 72 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 Q6JHZ5 121 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 Q96NJ1 140 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
DDX41-210ENST00000509576 hADV29S1A0JD25 119 aa6.73□□□□□ -1.33
DDX41-210ENST00000509576 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
DDX41-210ENST00000509576 C20orf202A1L168 122 aa6.7□□□□□ -1.34
DDX41-210ENST00000509576 LST1O00453 97 aa6.68□□□□□ -1.34
DDX41-210ENST00000509576 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
DDX41-210ENST00000509576 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
DDX41-210ENST00000509576 C12orf57Q99622 126 aa6.67□□□□□ -1.34
DDX41-210ENST00000509576 DSCR10P59022 87 aa6.66□□□□□ -1.34
DDX41-210ENST00000509576 HRES1P13985 223 aa6.65□□□□□ -1.34
DDX41-210ENST00000509576 VAMP3Q15836 100 aa6.65□□□□□ -1.34
DDX41-210ENST00000509576 FAM218AQ96MZ4 157 aa6.63□□□□□ -1.35
DDX41-210ENST00000509576 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
DDX41-210ENST00000509576 NOTCH2NLQ7Z3S9 236 aa6.62□□□□□ -1.35
DDX41-210ENST00000509576 PPDPFLQ8WWR9 84 aa6.62□□□□□ -1.35
DDX41-210ENST00000509576 A0A087WSZ3 146 aa6.61□□□□□ -1.35
DDX41-210ENST00000509576 SNHG12Q9BXW3 62 aa6.6□□□□□ -1.35
DDX41-210ENST00000509576 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
DDX41-210ENST00000509576 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
DDX41-210ENST00000509576 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
DDX41-210ENST00000509576 A0A1W2PNM2 257 aa6.58□□□□□ -1.36
DDX41-210ENST00000509576 TEN1Q86WV5 123 aa6.58□□□□□ -1.36
DDX41-210ENST00000509576 NDUFV3P56181 108 aaKnown RBP6.57□□□□□ -1.36
DDX41-210ENST00000509576 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
DDX41-210ENST00000509576 BVES-AS1Q5T3Y7 98 aa6.57□□□□□ -1.36
DDX41-210ENST00000509576 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
DDX41-210ENST00000509576 HIST1H2BLQ99880 126 aa6.57□□□□□ -1.36
DDX41-210ENST00000509576 SS18L2Q9UHA2 77 aa6.57□□□□□ -1.36
DDX41-210ENST00000509576 SCGB1D1O95968 90 aa6.55□□□□□ -1.36
DDX41-210ENST00000509576 KRTAP19-6Q3LI70 58 aa6.54□□□□□ -1.36
DDX41-210ENST00000509576 FAM236DA0A1B0GTK5 79 aa6.53□□□□□ -1.36
DDX41-210ENST00000509576 FAM236CP0DP71 79 aa6.53□□□□□ -1.36
DDX41-210ENST00000509576 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
DDX41-210ENST00000509576 H3BMG7 143 aa6.51□□□□□ -1.37
DDX41-210ENST00000509576 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
DDX41-210ENST00000509576 LINC00313P59037 77 aa6.5□□□□□ -1.37
DDX41-210ENST00000509576 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
DDX41-210ENST00000509576 LINC00846Q9NV44 126 aa6.5□□□□□ -1.37
DDX41-210ENST00000509576 COX8AP10176 69 aa6.49□□□□□ -1.37
DDX41-210ENST00000509576 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
DDX41-210ENST00000509576 LINC00472Q9H8W2 130 aa6.48□□□□□ -1.37
DDX41-210ENST00000509576 HSBP1L1C9JCN9 74 aa6.46□□□□□ -1.38
DDX41-210ENST00000509576 C2orf91Q6ZV80 131 aa6.46□□□□□ -1.38
DDX41-210ENST00000509576 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
DDX41-210ENST00000509576 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
DDX41-210ENST00000509576 A0A1B0GV72 72 aa6.45□□□□□ -1.38
DDX41-210ENST00000509576 H0YGX0 51 aa6.45□□□□□ -1.38
DDX41-210ENST00000509576 DLEU1O43261 78 aa6.44□□□□□ -1.38
DDX41-210ENST00000509576 FABP2P12104 132 aa6.44□□□□□ -1.38
DDX41-210ENST00000509576 C14orf144Q96I85 54 aa6.43□□□□□ -1.38
DDX41-210ENST00000509576 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
DDX41-210ENST00000509576 IGHV6-1A0A0B4J1U7 121 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 TRBV7-4A0A0J9YYF1 115 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 TRIAP1O43715 76 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 S100A2P29034 98 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
DDX41-210ENST00000509576 HIGD1BQ9P298 99 aa6.4□□□□□ -1.38
DDX41-210ENST00000509576 A0A1B0GX51 115 aa6.39□□□□□ -1.39
DDX41-210ENST00000509576 FXYD2P54710 66 aa6.39□□□□□ -1.39
DDX41-210ENST00000509576 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
DDX41-210ENST00000509576 ANKRD29Q8N6D5 301 aa6.38□□□□□ -1.39
DDX41-210ENST00000509576 SPINK7P58062 85 aa6.37□□□□□ -1.39
DDX41-210ENST00000509576 CEND1Q8N111 149 aa6.36□□□□□ -1.39
DDX41-210ENST00000509576 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
DDX41-210ENST00000509576 ZCCHC13Q8WW36 166 aaKnown RBP6.36□□□□□ -1.39
DDX41-210ENST00000509576 PRO1854Q9UHT4 67 aa6.36□□□□□ -1.39
DDX41-210ENST00000509576 A0A1B0GVX0 72 aa6.35□□□□□ -1.39
DDX41-210ENST00000509576 PAM16Q9Y3D7 125 aa6.35□□□□□ -1.39
DDX41-210ENST00000509576 CCKP06307 115 aa6.34□□□□□ -1.39
DDX41-210ENST00000509576 SPATA45Q537H7 98 aa6.33□□□□□ -1.4
DDX41-210ENST00000509576 SNCGO76070 127 aa6.32□□□□□ -1.4
DDX41-210ENST00000509576 K7ERJ3 54 aa6.31□□□□□ -1.4
DDX41-210ENST00000509576 TRACP01848 142 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms