RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
RFC1-211ENST00000509084 TMEM256-PLSCR3K7ERE1 68 aa6.31□□□□□ -1.4
RFC1-211ENST00000509084 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
RFC1-211ENST00000509084 UBE2V1Q13404 147 aa6.31□□□□□ -1.4
RFC1-211ENST00000509084 SPINK6Q6UWN8 80 aa6.31□□□□□ -1.4
RFC1-211ENST00000509084 TEX49A0A1B0GTD5 131 aa6.3□□□□□ -1.4
RFC1-211ENST00000509084 Q5VSD8 79 aa6.3□□□□□ -1.4
RFC1-211ENST00000509084 F8W1H4 67 aa6.29□□□□□ -1.4
RFC1-211ENST00000509084 SPRR1BP22528 89 aa6.29□□□□□ -1.4
RFC1-211ENST00000509084 Q8N1X5 172 aa6.29□□□□□ -1.4
RFC1-211ENST00000509084 SPRR4Q96PI1 79 aa6.29□□□□□ -1.4
RFC1-211ENST00000509084 BAALC-AS2P0C853 105 aa6.28□□□□□ -1.4
RFC1-211ENST00000509084 KRTAP10-4P60372 401 aaPredicted RBP6.28□□□□□ -1.4
RFC1-211ENST00000509084 ANKRD29Q8N6D5 301 aa6.28□□□□□ -1.4
RFC1-211ENST00000509084 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
RFC1-211ENST00000509084 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
RFC1-211ENST00000509084 LINC01547P58512 204 aaPredicted RBP6.27□□□□□ -1.41
RFC1-211ENST00000509084 LINC00483Q53H64 154 aa6.27□□□□□ -1.41
RFC1-211ENST00000509084 GAGE2AQ6NT46 116 aa6.27□□□□□ -1.41
RFC1-211ENST00000509084 LINC01600Q96MT4 127 aa6.27□□□□□ -1.41
RFC1-211ENST00000509084 Q8N377 158 aa6.26□□□□□ -1.41
RFC1-211ENST00000509084 MTURNQ8N3F0 131 aa6.26□□□□□ -1.41
RFC1-211ENST00000509084 LAMTOR3Q9UHA4 124 aa6.26□□□□□ -1.41
RFC1-211ENST00000509084 RYR1P21817 5038 aa6.26□□□□□ -1.41
RFC1-211ENST00000509084 F8WEM9 126 aa6.25□□□□□ -1.41
RFC1-211ENST00000509084 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
RFC1-211ENST00000509084 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
RFC1-211ENST00000509084 NDUFV3P56181 108 aaKnown RBP6.24□□□□□ -1.41
RFC1-211ENST00000509084 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
RFC1-211ENST00000509084 HSPG2P98160 4391 aa6.23□□□□□ -1.41
RFC1-211ENST00000509084 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
RFC1-211ENST00000509084 KIAA1109Q2LD37 5005 aa6.21□□□□□ -1.42
RFC1-211ENST00000509084 KRTAP1-4P0C5Y4 121 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 CRYGAP11844 174 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 SMIM29Q86T20 159 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 TEN1Q86WV5 123 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 C3orf22Q8N5N4 141 aa6.2□□□□□ -1.42
RFC1-211ENST00000509084 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
RFC1-211ENST00000509084 FAT1Q14517 4588 aa6.19□□□□□ -1.42
RFC1-211ENST00000509084 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
RFC1-211ENST00000509084 RBM3P98179 157 aaKnown RBP6.19□□□□□ -1.42
RFC1-211ENST00000509084 Q8NBF4 154 aa6.19□□□□□ -1.42
RFC1-211ENST00000509084 PDE6GP18545 87 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 ETDBQ3ZM63 59 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 C9orf153Q5TBE3 101 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 Q6JHZ5 121 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 OBSCN-AS1Q96MR7 158 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 DSCR8Q96T75 97 aa6.18□□□□□ -1.42
RFC1-211ENST00000509084 IGLV9-49A0A0B4J1Y8 123 aa6.17□□□□□ -1.42
RFC1-211ENST00000509084 MOBPQ13875 183 aa6.16□□□□□ -1.42
RFC1-211ENST00000509084 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
RFC1-211ENST00000509084 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
RFC1-211ENST00000509084 A0A087X002 238 aa6.15□□□□□ -1.42
RFC1-211ENST00000509084 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.42
RFC1-211ENST00000509084 LOC110117498A0A087WWA1 95 aa6.14□□□□□ -1.43
RFC1-211ENST00000509084 A0A1B0GV72 72 aa6.14□□□□□ -1.43
RFC1-211ENST00000509084 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
RFC1-211ENST00000509084 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
RFC1-211ENST00000509084 IGFL1Q6UW32 110 aa6.13□□□□□ -1.43
RFC1-211ENST00000509084 TYMSOSQ8TAI1 123 aa6.13□□□□□ -1.43
RFC1-211ENST00000509084 C14orf132Q9NPU4 83 aa6.13□□□□□ -1.43
RFC1-211ENST00000509084 HERC2O95714 4834 aa6.13□□□□□ -1.43
RFC1-211ENST00000509084 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
RFC1-211ENST00000509084 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
RFC1-211ENST00000509084 PCLOQ9Y6V0 5065 aa6.11□□□□□ -1.43
RFC1-211ENST00000509084 A0A1B0GW54 56 aa6.11□□□□□ -1.43
RFC1-211ENST00000509084 Q6Q795 121 aa6.11□□□□□ -1.43
RFC1-211ENST00000509084 Q6ZQT0 140 aa6.11□□□□□ -1.43
RFC1-211ENST00000509084 J3QR89 54 aa6.1□□□□□ -1.43
RFC1-211ENST00000509084 OXTP01178 125 aa6.1□□□□□ -1.43
RFC1-211ENST00000509084 CCKP06307 115 aa6.1□□□□□ -1.43
RFC1-211ENST00000509084 CD164Q04900 197 aa6.1□□□□□ -1.43
RFC1-211ENST00000509084 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
RFC1-211ENST00000509084 SPAG11AQ6PDA7 123 aa6.09□□□□□ -1.43
RFC1-211ENST00000509084 SRRM2Q9UQ35 2752 aaKnown RBP6.09□□□□□ -1.43
RFC1-211ENST00000509084 VPS25Q9BRG1 176 aa6.08□□□□□ -1.44
RFC1-211ENST00000509084 A0A1W2PNM2 257 aa6.07□□□□□ -1.44
RFC1-211ENST00000509084 LINC00304Q8N9R0 145 aa6.07□□□□□ -1.44
RFC1-211ENST00000509084 KRTAP4-5Q9BYR2 181 aa6.07□□□□□ -1.44
RFC1-211ENST00000509084 FAM240AA0A1B0GVK7 77 aa6.06□□□□□ -1.44
RFC1-211ENST00000509084 SS18L2Q9UHA2 77 aa6.06□□□□□ -1.44
RFC1-211ENST00000509084 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
RFC1-211ENST00000509084 SPINK1P00995 79 aa6.05□□□□□ -1.44
RFC1-211ENST00000509084 ACYP1P07311 99 aa6.05□□□□□ -1.44
RFC1-211ENST00000509084 KRTAP10-8P60410 259 aa6.05□□□□□ -1.44
RFC1-211ENST00000509084 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
RFC1-211ENST00000509084 LIMD2Q9BT23 127 aa6.05□□□□□ -1.44
RFC1-211ENST00000509084 A0A0G2JQZ4 141 aa6.04□□□□□ -1.44
RFC1-211ENST00000509084 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
RFC1-211ENST00000509084 K7ERU9 68 aa6.04□□□□□ -1.44
RFC1-211ENST00000509084 HRCT1Q6UXD1 115 aa6.03□□□□□ -1.44
RFC1-211ENST00000509084 A0A087WSZ3 146 aa6.02□□□□□ -1.45
RFC1-211ENST00000509084 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
RFC1-211ENST00000509084 Q5XG85 94 aa6.01□□□□□ -1.45
RFC1-211ENST00000509084 MT1HL1P0DM35 61 aa6□□□□□ -1.45
RFC1-211ENST00000509084 SVIPQ8NHG7 77 aa6□□□□□ -1.45
RFC1-211ENST00000509084 UBL5Q9BZL1 73 aa6□□□□□ -1.45
RFC1-211ENST00000509084 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
RFC1-211ENST00000509084 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms