RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DNAH1Q9P2D7 4330 aa2.34□□□□□ -2.04
NEDD4-209ENST00000508871 ZNF469Q96JG9 3925 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-209ENST00000508871 DEFB130BP0DP73 79 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 DEFB130AP0DP74 79 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 A0A096LPF7 62 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 LINC01556Q5JQF7 62 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 BOD1L1Q8NFC6 3051 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
NEDD4-209ENST00000508871 DCHS2Q6V1P9 2916 aa2.32□□□□□ -2.04
NEDD4-209ENST00000508871 CDKN2A-AS1Q9UH64 79 aa2.32□□□□□ -2.04
NEDD4-209ENST00000508871 KRTAP4-5Q9BYR2 181 aa2.32□□□□□ -2.04
NEDD4-209ENST00000508871 NBEAQ8NFP9 2946 aa2.32□□□□□ -2.04
NEDD4-209ENST00000508871 IGF2RP11717 2491 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 DSPP15924 2871 aaKnown RBP2.31□□□□□ -2.04
NEDD4-209ENST00000508871 LINC00158P58513 81 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 IGFL1Q6UW32 110 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 ANKRD17O75179 2603 aaKnown RBP2.31□□□□□ -2.04
NEDD4-209ENST00000508871 TRBV7-4A0A0J9YYF1 115 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 K7EIL1 84 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 C9orf163Q8N9P6 203 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 LINC00308Q8TCZ7 52 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 TLN1Q9Y490 2541 aaKnown RBP2.31□□□□□ -2.04
NEDD4-209ENST00000508871 SVEP1Q4LDE5 3571 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 DEFB131BA0A096LNP1 70 aa2.31□□□□□ -2.04
NEDD4-209ENST00000508871 KRTAP29-1A8MX34 341 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-209ENST00000508871 MAP1BP46821 2468 aaKnown RBP2.3□□□□□ -2.04
NEDD4-209ENST00000508871 RIF1Q5UIP0 2472 aaKnown RBP2.3□□□□□ -2.04
NEDD4-209ENST00000508871 ANGP03950 147 aaKnown RBP2.3□□□□□ -2.04
NEDD4-209ENST00000508871 CYSTM1Q9H1C7 97 aa2.29□□□□□ -2.04
NEDD4-209ENST00000508871 LRBAP50851 2863 aa2.29□□□□□ -2.04
NEDD4-209ENST00000508871 KRTAP26-1Q6PEX3 210 aa2.29□□□□□ -2.04
NEDD4-209ENST00000508871 PRRC2CQ9Y520 2896 aaKnown RBP2.29□□□□□ -2.04
NEDD4-209ENST00000508871 ALMS1Q8TCU4 4167 aa2.29□□□□□ -2.04
NEDD4-209ENST00000508871 CSMD1Q96PZ7 3565 aa2.29□□□□□ -2.04
NEDD4-209ENST00000508871 CUBNO60494 3623 aa2.28□□□□□ -2.04
NEDD4-209ENST00000508871 RELNP78509 3460 aa2.28□□□□□ -2.04
NEDD4-209ENST00000508871 PLAC4Q8WY50 150 aa2.28□□□□□ -2.04
NEDD4-209ENST00000508871 APLNQ9ULZ1 77 aa2.28□□□□□ -2.04
NEDD4-209ENST00000508871 LY6G6CO95867 125 aa2.28□□□□□ -2.04
NEDD4-209ENST00000508871 ASH1LQ9NR48 2969 aaKnown RBP2.28□□□□□ -2.05
NEDD4-209ENST00000508871 DEFB4AO15263 64 aa2.28□□□□□ -2.05
NEDD4-209ENST00000508871 HUWE1Q7Z6Z7 4374 aaKnown RBP2.28□□□□□ -2.05
NEDD4-209ENST00000508871 DEFB104AQ8WTQ1 72 aa2.27□□□□□ -2.05
NEDD4-209ENST00000508871 WFDC10BQ8IUB3 73 aa2.27□□□□□ -2.05
NEDD4-209ENST00000508871 MYO18BQ8IUG5 2567 aa2.27□□□□□ -2.05
NEDD4-209ENST00000508871 HTN3P15516 51 aa2.27□□□□□ -2.05
NEDD4-209ENST00000508871 PCOTHQ58A44 107 aa2.27□□□□□ -2.05
NEDD4-209ENST00000508871 CFAP46Q8IYW2 2715 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 CELSR1Q9NYQ6 3014 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 TOMM7Q9P0U1 55 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 ADGRG4Q8IZF6 3080 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 WFDC13Q8IUB5 93 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 DNAH7Q8WXX0 4024 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 UTP20O75691 2785 aaKnown RBP2.26□□□□□ -2.05
NEDD4-209ENST00000508871 TENM4Q6N022 2769 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 NBDYA0A0U1RRE5 68 aa2.26□□□□□ -2.05
NEDD4-209ENST00000508871 SPTA1P02549 2419 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 TRRAPQ9Y4A5 3859 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 LINC00575Q6W349 94 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 KRTAP11-1Q8IUC1 163 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 APCP25054 2843 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 C6orf48Q9UBA6 75 aa2.25□□□□□ -2.05
NEDD4-209ENST00000508871 CLPSL2Q6UWE3 100 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 ZNF462Q96JM2 2506 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 CELSR2Q9HCU4 2923 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 NCOR2Q9Y618 2525 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 SPTBN4Q9H254 2564 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 CEP295Q9C0D2 2601 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 LOC110117498A0A087WWA1 95 aa2.24□□□□□ -2.05
NEDD4-209ENST00000508871 CSMD2Q7Z408 3487 aa2.23□□□□□ -2.05
NEDD4-209ENST00000508871 USP9XQ93008 2570 aaPredicted RBP2.23□□□□□ -2.05
NEDD4-209ENST00000508871 INE1O15225 51 aa2.23□□□□□ -2.05
NEDD4-209ENST00000508871 JMJD1CQ15652 2540 aa2.23□□□□□ -2.05
NEDD4-209ENST00000508871 ITPR3Q14573 2671 aa2.23□□□□□ -2.05
NEDD4-209ENST00000508871 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 DNAH9Q9NYC9 4486 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 ROS1P08922 2347 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
NEDD4-209ENST00000508871 UNQ6190/PRO20217Q6UXQ8 127 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 KCNQ1DNQ9H478 68 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 PRLHP81277 87 aa2.22□□□□□ -2.05
NEDD4-209ENST00000508871 NOTCH3Q9UM47 2321 aa2.21□□□□□ -2.06
NEDD4-209ENST00000508871 TP53AIP1Q9HCN2 124 aa2.21□□□□□ -2.06
NEDD4-209ENST00000508871 A8MU10 97 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 ANAPC11Q9NYG5 84 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 TACC2O95359 2948 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 SPRR1AP35321 89 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 C2CD3Q4AC94 2353 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 MT3P25713 68 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 ACACBO00763 2458 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 Q96NJ1 140 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 Q6ZRN7 208 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-209ENST00000508871 KRTAP7-1Q8IUC3 87 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 CRYBG3Q68DQ2 2970 aa2.2□□□□□ -2.06
NEDD4-209ENST00000508871 FAM208BQ5VWN6 2430 aa2.19□□□□□ -2.06
NEDD4-209ENST00000508871 PKHD1L1Q86WI1 4243 aa2.19□□□□□ -2.06
NEDD4-209ENST00000508871 OTOGQ6ZRI0 2925 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms