RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 CLEC2BQ92478 149 aa5.4□□□□□ -1.54
NEDD9-212ENST00000508800 LST1O00453 97 aa5.39□□□□□ -1.55
NEDD9-212ENST00000508800 NHP2Q9NX24 153 aaKnown RBP5.39□□□□□ -1.55
NEDD9-212ENST00000508800 TMA7Q9Y2S6 64 aaKnown RBP5.39□□□□□ -1.55
NEDD9-212ENST00000508800 HERVK_113P61574 105 aa5.38□□□□□ -1.55
NEDD9-212ENST00000508800 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
NEDD9-212ENST00000508800 A4D1N5 150 aa5.37□□□□□ -1.55
NEDD9-212ENST00000508800 PLNP26678 52 aa5.37□□□□□ -1.55
NEDD9-212ENST00000508800 ADAMTSL4-AS1Q5T5F5 129 aa5.37□□□□□ -1.55
NEDD9-212ENST00000508800 LINC00308Q8TCZ7 52 aa5.36□□□□□ -1.55
NEDD9-212ENST00000508800 A0A0J9YXY3 114 aa5.35□□□□□ -1.55
NEDD9-212ENST00000508800 A6NN06 94 aa5.35□□□□□ -1.55
NEDD9-212ENST00000508800 SS18L2Q9UHA2 77 aa5.35□□□□□ -1.55
NEDD9-212ENST00000508800 TRAV13-2A0A0B4J235 113 aa5.34□□□□□ -1.55
NEDD9-212ENST00000508800 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
NEDD9-212ENST00000508800 NOTCH2NLQ7Z3S9 236 aa5.34□□□□□ -1.55
NEDD9-212ENST00000508800 CHCHD1Q96BP2 118 aaKnown RBP5.34□□□□□ -1.55
NEDD9-212ENST00000508800 TRAPPC1Q9Y5R8 145 aa5.32□□□□□ -1.56
NEDD9-212ENST00000508800 H0Y8G0 127 aa5.3□□□□□ -1.56
NEDD9-212ENST00000508800 TIMM17BO60830 172 aa5.3□□□□□ -1.56
NEDD9-212ENST00000508800 DPM2O94777 84 aa5.29□□□□□ -1.56
NEDD9-212ENST00000508800 LITAFQ99732 161 aa5.29□□□□□ -1.56
NEDD9-212ENST00000508800 OCIAD2Q56VL3 154 aa5.28□□□□□ -1.56
NEDD9-212ENST00000508800 SLC7A5P1Q8MH63 180 aa5.27□□□□□ -1.57
NEDD9-212ENST00000508800 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
NEDD9-212ENST00000508800 hCG_2014768A0A024R1R8 64 aa5.26□□□□□ -1.57
NEDD9-212ENST00000508800 SCGB1D1O95968 90 aa5.26□□□□□ -1.57
NEDD9-212ENST00000508800 IGKCP01834 107 aa5.26□□□□□ -1.57
NEDD9-212ENST00000508800 DSCR10P59022 87 aa5.26□□□□□ -1.57
NEDD9-212ENST00000508800 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
NEDD9-212ENST00000508800 E9PLD3 99 aa5.25□□□□□ -1.57
NEDD9-212ENST00000508800 HSBP1O75506 76 aa5.25□□□□□ -1.57
NEDD9-212ENST00000508800 LINC00313P59037 77 aa5.24□□□□□ -1.57
NEDD9-212ENST00000508800 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
NEDD9-212ENST00000508800 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
NEDD9-212ENST00000508800 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
NEDD9-212ENST00000508800 A6NDN8 102 aa5.23□□□□□ -1.57
NEDD9-212ENST00000508800 SERF1AO75920 110 aa5.22□□□□□ -1.57
NEDD9-212ENST00000508800 LEPROTL1O95214 131 aa5.22□□□□□ -1.57
NEDD9-212ENST00000508800 UQCC3Q6UW78 93 aa5.22□□□□□ -1.57
NEDD9-212ENST00000508800 Q6ZQY7 126 aa5.22□□□□□ -1.57
NEDD9-212ENST00000508800 PPDPFLQ8WWR9 84 aa5.22□□□□□ -1.57
NEDD9-212ENST00000508800 GPR98Q8WXG9 6306 aa5.21□□□□□ -1.57
NEDD9-212ENST00000508800 TMEM218A2RU14 115 aa5.21□□□□□ -1.58
NEDD9-212ENST00000508800 LINC00310P59036 64 aa5.21□□□□□ -1.58
NEDD9-212ENST00000508800 VAMP3Q15836 100 aa5.21□□□□□ -1.58
NEDD9-212ENST00000508800 COLCA2A8K830 154 aa5.2□□□□□ -1.58
NEDD9-212ENST00000508800 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
NEDD9-212ENST00000508800 TEN1Q86WV5 123 aa5.19□□□□□ -1.58
NEDD9-212ENST00000508800 FAM218AQ96MZ4 157 aa5.19□□□□□ -1.58
NEDD9-212ENST00000508800 PMCHL2Q9BQD1 86 aa5.19□□□□□ -1.58
NEDD9-212ENST00000508800 HSPB8Q9UJY1 196 aa5.19□□□□□ -1.58
NEDD9-212ENST00000508800 hADV29S1A0JD25 119 aa5.18□□□□□ -1.58
NEDD9-212ENST00000508800 KRTAP10-5P60370 271 aa5.18□□□□□ -1.58
NEDD9-212ENST00000508800 LINC00575Q6W349 94 aa5.18□□□□□ -1.58
NEDD9-212ENST00000508800 SNHG12Q9BXW3 62 aa5.18□□□□□ -1.58
NEDD9-212ENST00000508800 SMIM11BQ8TCY0 68 aa5.17□□□□□ -1.58
NEDD9-212ENST00000508800 A0A087WSZ3 146 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 IFITM1P13164 125 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 SPRR2EP22531 72 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 SPRR2BP35325 72 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 SPRR2AP35326 72 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 SPINK7P58062 85 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 Q5VV11 94 aa5.16□□□□□ -1.58
NEDD9-212ENST00000508800 H3BUT2 72 aa5.15□□□□□ -1.59
NEDD9-212ENST00000508800 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.15□□□□□ -1.59
NEDD9-212ENST00000508800 A0A1W2PNM2 257 aa5.14□□□□□ -1.59
NEDD9-212ENST00000508800 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
NEDD9-212ENST00000508800 MT1BP07438 61 aa5.13□□□□□ -1.59
NEDD9-212ENST00000508800 WFDC13Q8IUB5 93 aa5.13□□□□□ -1.59
NEDD9-212ENST00000508800 CLLU1Q5K131 121 aa5.12□□□□□ -1.59
NEDD9-212ENST00000508800 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
NEDD9-212ENST00000508800 ZCCHC13Q8WW36 166 aaKnown RBP5.11□□□□□ -1.59
NEDD9-212ENST00000508800 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
NEDD9-212ENST00000508800 FABP4P15090 132 aa5.1□□□□□ -1.59
NEDD9-212ENST00000508800 SCGB1D4Q6XE38 83 aa5.1□□□□□ -1.59
NEDD9-212ENST00000508800 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
NEDD9-212ENST00000508800 C3orf79P0CE67 100 aa5.09□□□□□ -1.59
NEDD9-212ENST00000508800 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
NEDD9-212ENST00000508800 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
NEDD9-212ENST00000508800 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
NEDD9-212ENST00000508800 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
NEDD9-212ENST00000508800 C12orf57Q99622 126 aa5.06□□□□□ -1.6
NEDD9-212ENST00000508800 TTTY13Q9BZ97 58 aa5.06□□□□□ -1.6
NEDD9-212ENST00000508800 IGHV6-1A0A0B4J1U7 121 aa5.05□□□□□ -1.6
NEDD9-212ENST00000508800 KRTAP4-2Q9BYR5 136 aa5.05□□□□□ -1.6
NEDD9-212ENST00000508800 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
NEDD9-212ENST00000508800 BVES-AS1Q5T3Y7 98 aa5.03□□□□□ -1.6
NEDD9-212ENST00000508800 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
NEDD9-212ENST00000508800 TRGC2P03986 189 aa5.02□□□□□ -1.61
NEDD9-212ENST00000508800 NDUFV3P56181 108 aaKnown RBP5.02□□□□□ -1.61
NEDD9-212ENST00000508800 RAB37Q96AX2 223 aa5.02□□□□□ -1.61
NEDD9-212ENST00000508800 SYS1-DBNDD2H3BUS1 97 aa5.01□□□□□ -1.61
NEDD9-212ENST00000508800 SNCGO76070 127 aa5.01□□□□□ -1.61
NEDD9-212ENST00000508800 SPRR2DP22532 72 aa5.01□□□□□ -1.61
NEDD9-212ENST00000508800 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
NEDD9-212ENST00000508800 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
NEDD9-212ENST00000508800 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
NEDD9-212ENST00000508800 LINC01545Q5VT33 79 aa5□□□□□ -1.61
NEDD9-212ENST00000508800 DSCR8Q96T75 97 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms