RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 DEPDC5O75140 1603 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 COL6A3P12111 3177 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 HMCN2Q8NDA2 5059 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 HECTD1Q9ULT8 2610 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 PLXNC1O60486 1568 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 LRRIQ1Q96JM4 1722 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 CD163L1Q9NR16 1453 aa0.1□□□□□ -2.39
TRAPPC13-209ENST00000508304 EIF2AK4Q9P2K8 1649 aaKnown RBP0.09□□□□□ -2.39
TRAPPC13-209ENST00000508304 NBASA2RRP1 2371 aa0.09□□□□□ -2.39
TRAPPC13-209ENST00000508304 KCNQ1DNQ9H478 68 aa0.09□□□□□ -2.4
TRAPPC13-209ENST00000508304 HILPDAQ9Y5L2 63 aa0.09□□□□□ -2.4
TRAPPC13-209ENST00000508304 IQGAP3Q86VI3 1631 aa0.09□□□□□ -2.4
TRAPPC13-209ENST00000508304 AKAP13Q12802 2813 aa0.09□□□□□ -2.4
TRAPPC13-209ENST00000508304 ZANQ9Y493 2812 aa0.09□□□□□ -2.4
TRAPPC13-209ENST00000508304 H0YAA0 97 aa0.08□□□□□ -2.4
TRAPPC13-209ENST00000508304 IAPPP10997 89 aa0.08□□□□□ -2.4
TRAPPC13-209ENST00000508304 TENM2Q9NT68 2774 aa0.07□□□□□ -2.4
TRAPPC13-209ENST00000508304 WIZO95785 1651 aa0.07□□□□□ -2.4
TRAPPC13-209ENST00000508304 ITSN1Q15811 1721 aa0.07□□□□□ -2.4
TRAPPC13-209ENST00000508304 ETDCA0A1B0GVM5 59 aa0.05□□□□□ -2.4
TRAPPC13-209ENST00000508304 LYNX1G3V0Z9 82 aa0.05□□□□□ -2.4
TRAPPC13-209ENST00000508304 PRRC2CQ9Y520 2896 aaKnown RBP0.05□□□□□ -2.4
TRAPPC13-209ENST00000508304 CDC42BPGQ6DT37 1551 aa0.03□□□□□ -2.4
TRAPPC13-209ENST00000508304 DEFB130BP0DP73 79 aa0.03□□□□□ -2.4
TRAPPC13-209ENST00000508304 DEFB130AP0DP74 79 aa0.03□□□□□ -2.4
TRAPPC13-209ENST00000508304 STAB1Q9NY15 2570 aa0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 DSPP15924 2871 aaKnown RBP0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 LRP2P98164 4655 aa0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 DIP2AQ14689 1571 aa0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 TJP1Q07157 1748 aa0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 NRAPQ86VF7 1730 aa0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 TNRC18O15417 2968 aaPredicted RBP0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 KIAA0586Q9BVV6 1533 aa0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 SPTBN4Q9H254 2564 aa-0□□□□□ -2.41
TRAPPC13-209ENST00000508304 PARP4Q9UKK3 1724 aaKnown RBP-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 ASXL1Q8IXJ9 1541 aa-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 BPTFQ12830 3046 aa-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 MAP1AP78559 2803 aaPredicted RBP-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 SETD2Q9BYW2 2564 aaPredicted RBP-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 CRIP1P50238 77 aa-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 NBEAL1Q6ZS30 2694 aa-0.01□□□□□ -2.41
TRAPPC13-209ENST00000508304 ABCA9Q8IUA7 1624 aa-0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 STAB2Q8WWQ8 2551 aa-0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 MINOS1Q5TGZ0 78 aa-0.02□□□□□ -2.41
TRAPPC13-209ENST00000508304 H3BNG1 76 aa-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 DEFB114Q30KQ6 69 aa-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 DEFB106AQ8N104 65 aa-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 NHSQ6T4R5 1651 aa-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 RNF17Q9BXT8 1623 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 SPG11Q96JI7 2443 aa-0.03□□□□□ -2.41
TRAPPC13-209ENST00000508304 ZC3H13Q5T200 1668 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-209ENST00000508304 PRLHP81277 87 aa-0.04□□□□□ -2.42
TRAPPC13-209ENST00000508304 NF1P21359 2839 aa-0.04□□□□□ -2.42
TRAPPC13-209ENST00000508304 INO80Q9ULG1 1556 aaPredicted RBP-0.05□□□□□ -2.42
TRAPPC13-209ENST00000508304 LRP1BQ9NZR2 4599 aa-0.05□□□□□ -2.42
TRAPPC13-209ENST00000508304 C9orf92A6NGG3 77 aa-0.06□□□□□ -2.42
TRAPPC13-209ENST00000508304 SPRR2AP35326 72 aa-0.06□□□□□ -2.42
TRAPPC13-209ENST00000508304 LINC01549A6NIU2 74 aa-0.07□□□□□ -2.42
TRAPPC13-209ENST00000508304 EFCAB5A4FU69 1503 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 ABCC6O95255 1503 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 ZZEF1O43149 2961 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 NCBP2-AS2Q69YL0 99 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 DSTQ03001 7570 aaKnown RBP-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 DNMBPQ6XZF7 1577 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 HTTP42858 3142 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 CEP290O15078 2479 aa-0.08□□□□□ -2.42
TRAPPC13-209ENST00000508304 PDZD2O15018 2839 aa-0.09□□□□□ -2.42
TRAPPC13-209ENST00000508304 MROH1Q8NDA8 1641 aa-0.09□□□□□ -2.42
TRAPPC13-209ENST00000508304 PKD1L2Q7Z442 2459 aa-0.1□□□□□ -2.43
TRAPPC13-209ENST00000508304 FCER1GP30273 86 aa-0.1□□□□□ -2.43
TRAPPC13-209ENST00000508304 C6orf48Q9UBA6 75 aa-0.1□□□□□ -2.43
TRAPPC13-209ENST00000508304 SRRM2Q9UQ35 2752 aaKnown RBP-0.1□□□□□ -2.43
TRAPPC13-209ENST00000508304 C3P01024 1663 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 SVEP1Q4LDE5 3571 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 KRTAP6-2Q3LI66 62 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 S4R3F8 94 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 TGP01266 2768 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
TRAPPC13-209ENST00000508304 SONP18583 2426 aaKnown RBP-0.12□□□□□ -2.43
TRAPPC13-209ENST00000508304 WT1-ASQ06250 92 aa-0.12□□□□□ -2.43
TRAPPC13-209ENST00000508304 LYSTQ99698 3801 aa-0.12□□□□□ -2.43
TRAPPC13-209ENST00000508304 ANKRD36CQ5JPF3 1778 aa-0.12□□□□□ -2.43
TRAPPC13-209ENST00000508304 A0A087WWC5 75 aa-0.13□□□□□ -2.43
TRAPPC13-209ENST00000508304 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
TRAPPC13-209ENST00000508304 MTORP42345 2549 aa-0.13□□□□□ -2.43
TRAPPC13-209ENST00000508304 PKHD1P08F94 4074 aa-0.13□□□□□ -2.43
TRAPPC13-209ENST00000508304 MADDQ8WXG6 1647 aa-0.13□□□□□ -2.43
TRAPPC13-209ENST00000508304 K7EMI3 77 aa-0.14□□□□□ -2.43
TRAPPC13-209ENST00000508304 MUC12Q9UKN1 5478 aa-0.15□□□□□ -2.43
TRAPPC13-209ENST00000508304 SERF2P84101 59 aa-0.15□□□□□ -2.43
TRAPPC13-209ENST00000508304 S100ZQ8WXG8 99 aa-0.15□□□□□ -2.43
TRAPPC13-209ENST00000508304 DMXL1Q9Y485 3027 aa-0.15□□□□□ -2.43
TRAPPC13-209ENST00000508304 CCDC180Q9P1Z9 1646 aa-0.16□□□□□ -2.43
TRAPPC13-209ENST00000508304 KIF1AQ12756 1690 aa-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 ITSN2Q9NZM3 1697 aa-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 H3BUA1 57 aa-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 SPRR2EP22531 72 aa-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 RPS27P42677 84 aaKnown RBP-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 RPS27LQ71UM5 84 aaKnown RBP-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms