RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 A0A0J9YXY3 114 aa5.52□□□□□ -1.53
PDGFRA-205ENST00000507536 SERF1AO75920 110 aa5.52□□□□□ -1.53
PDGFRA-205ENST00000507536 HRCT1Q6UXD1 115 aa5.52□□□□□ -1.53
PDGFRA-205ENST00000507536 LIMD2Q9BT23 127 aa5.52□□□□□ -1.53
PDGFRA-205ENST00000507536 C20orf202A1L168 122 aa5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 DPM2O94777 84 aa5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 LEPROTL1O95214 131 aa5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 SCGB1D1O95968 90 aa5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 LGALS3P17931 250 aaKnown RBP5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 LITAFQ99732 161 aa5.51□□□□□ -1.53
PDGFRA-205ENST00000507536 IGKCP01834 107 aa5.5□□□□□ -1.53
PDGFRA-205ENST00000507536 HERVK_113P61574 105 aa5.49□□□□□ -1.53
PDGFRA-205ENST00000507536 E9PLD3 99 aa5.48□□□□□ -1.53
PDGFRA-205ENST00000507536 CD164Q04900 197 aa5.48□□□□□ -1.53
PDGFRA-205ENST00000507536 ELOF1P60002 83 aaKnown RBP5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 Q5XG85 94 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 PET117Q6UWS5 81 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 VAMP8Q9BV40 100 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 SPANXCQ9NY87 97 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 DHRS4-AS1Q9P1J3 65 aa5.47□□□□□ -1.53
PDGFRA-205ENST00000507536 H7C2G1 150 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 Q1RN00 199 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 SLC25A34Q6PIV7 304 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 SMIM29Q86T20 159 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 LAMTOR3Q9UHA4 124 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 HSPB8Q9UJY1 196 aa5.46□□□□□ -1.54
PDGFRA-205ENST00000507536 A0A0G2JQZ4 141 aa5.45□□□□□ -1.54
PDGFRA-205ENST00000507536 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-205ENST00000507536 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
PDGFRA-205ENST00000507536 TIMM17BO60830 172 aa5.44□□□□□ -1.54
PDGFRA-205ENST00000507536 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
PDGFRA-205ENST00000507536 OR13C6PQ8NH95 151 aa5.44□□□□□ -1.54
PDGFRA-205ENST00000507536 SPANXDQ9BXN6 97 aa5.44□□□□□ -1.54
PDGFRA-205ENST00000507536 UQCR10Q9UDW1 63 aa5.44□□□□□ -1.54
PDGFRA-205ENST00000507536 COX7BP24311 80 aa5.43□□□□□ -1.54
PDGFRA-205ENST00000507536 BATFQ16520 125 aa5.43□□□□□ -1.54
PDGFRA-205ENST00000507536 IGLV5-48A0A075B6I7 105 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 TEX49A0A1B0GTD5 131 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 M0R2T5 61 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 DEFB105AQ8NG35 78 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 VPS25Q9BRG1 176 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
PDGFRA-205ENST00000507536 K7ERU9 68 aa5.41□□□□□ -1.54
PDGFRA-205ENST00000507536 TAL2Q16559 108 aa5.41□□□□□ -1.54
PDGFRA-205ENST00000507536 TRBV7-6A0A0J9YX20 115 aa5.4□□□□□ -1.54
PDGFRA-205ENST00000507536 SYS1-DBNDD2H3BUS1 97 aa5.4□□□□□ -1.54
PDGFRA-205ENST00000507536 COX6B2Q6YFQ2 88 aa5.4□□□□□ -1.54
PDGFRA-205ENST00000507536 ZNF815PA8K554 130 aa5.39□□□□□ -1.55
PDGFRA-205ENST00000507536 LINC01545Q5VT33 79 aa5.39□□□□□ -1.55
PDGFRA-205ENST00000507536 PAM16Q9Y3D7 125 aa5.39□□□□□ -1.55
PDGFRA-205ENST00000507536 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
PDGFRA-205ENST00000507536 SPATA45Q537H7 98 aa5.38□□□□□ -1.55
PDGFRA-205ENST00000507536 A0A1B0GWB2 263 aa5.37□□□□□ -1.55
PDGFRA-205ENST00000507536 USH2AO75445 5202 aa5.37□□□□□ -1.55
PDGFRA-205ENST00000507536 A4D1N5 150 aa5.36□□□□□ -1.55
PDGFRA-205ENST00000507536 SCGB1A1P11684 91 aa5.36□□□□□ -1.55
PDGFRA-205ENST00000507536 VAMP3Q15836 100 aa5.36□□□□□ -1.55
PDGFRA-205ENST00000507536 OCIAD2Q56VL3 154 aa5.36□□□□□ -1.55
PDGFRA-205ENST00000507536 KRTDAPP60985 99 aa5.34□□□□□ -1.55
PDGFRA-205ENST00000507536 TCL1BO95988 128 aa5.32□□□□□ -1.56
PDGFRA-205ENST00000507536 C3orf79P0CE67 100 aa5.32□□□□□ -1.56
PDGFRA-205ENST00000507536 GTF2H5Q6ZYL4 71 aa5.32□□□□□ -1.56
PDGFRA-205ENST00000507536 MPLKIPQ8TAP9 179 aa5.32□□□□□ -1.56
PDGFRA-205ENST00000507536 IGKV2D-30A0A075B6S6 120 aa5.31□□□□□ -1.56
PDGFRA-205ENST00000507536 A6NDN8 102 aa5.31□□□□□ -1.56
PDGFRA-205ENST00000507536 Q75L30 129 aa5.31□□□□□ -1.56
PDGFRA-205ENST00000507536 SMIM11BQ8TCY0 68 aa5.31□□□□□ -1.56
PDGFRA-205ENST00000507536 A0A1B0GV72 72 aa5.3□□□□□ -1.56
PDGFRA-205ENST00000507536 IFITM1P13164 125 aa5.3□□□□□ -1.56
PDGFRA-205ENST00000507536 SCGB1D4Q6XE38 83 aa5.3□□□□□ -1.56
PDGFRA-205ENST00000507536 MTURNQ8N3F0 131 aa5.3□□□□□ -1.56
PDGFRA-205ENST00000507536 OBSCN-AS1Q96MR7 158 aa5.3□□□□□ -1.56
PDGFRA-205ENST00000507536 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
PDGFRA-205ENST00000507536 IGFL1Q6UW32 110 aa5.29□□□□□ -1.56
PDGFRA-205ENST00000507536 MUSTN1Q8IVN3 82 aa5.29□□□□□ -1.56
PDGFRA-205ENST00000507536 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
PDGFRA-205ENST00000507536 Q6Q795 121 aa5.28□□□□□ -1.56
PDGFRA-205ENST00000507536 PCP2Q8IVA1 136 aa5.28□□□□□ -1.56
PDGFRA-205ENST00000507536 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
PDGFRA-205ENST00000507536 TAX1BP3O14907 124 aa5.27□□□□□ -1.57
PDGFRA-205ENST00000507536 LINC00575Q6W349 94 aa5.27□□□□□ -1.57
PDGFRA-205ENST00000507536 Q6ZVH6 145 aa5.27□□□□□ -1.57
PDGFRA-205ENST00000507536 CLEC2BQ92478 149 aa5.27□□□□□ -1.57
PDGFRA-205ENST00000507536 NHP2Q9NX24 153 aaKnown RBP5.27□□□□□ -1.57
PDGFRA-205ENST00000507536 J3QR89 54 aa5.26□□□□□ -1.57
PDGFRA-205ENST00000507536 Q6ZQY7 126 aa5.26□□□□□ -1.57
PDGFRA-205ENST00000507536 COPS9Q8WXC6 57 aa5.26□□□□□ -1.57
PDGFRA-205ENST00000507536 TRAV13-2A0A0B4J235 113 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 F8WEM9 126 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 CFC1P0CG37 223 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 BVES-AS1Q5T3Y7 98 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 Q6JHZ5 121 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 ATOH7Q8N100 152 aa5.25□□□□□ -1.57
PDGFRA-205ENST00000507536 SIGMAR1Q99720 223 aa5.24□□□□□ -1.57
PDGFRA-205ENST00000507536 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
PDGFRA-205ENST00000507536 hADV29S1A0JD25 119 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms