RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 UQCC3Q6UW78 93 aa3.33□□□□□ -1.88
VCAN-207ENST00000507162 SLC51BQ86UW2 128 aa3.33□□□□□ -1.88
VCAN-207ENST00000507162 BAGE3Q86Y29 109 aa3.33□□□□□ -1.88
VCAN-207ENST00000507162 OR13C6PQ8NH95 151 aa3.33□□□□□ -1.88
VCAN-207ENST00000507162 MIEN1Q9BRT3 115 aa3.33□□□□□ -1.88
VCAN-207ENST00000507162 TMEM223A0PJW6 202 aa3.32□□□□□ -1.88
VCAN-207ENST00000507162 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
VCAN-207ENST00000507162 COMMD7Q86VX2 200 aa3.32□□□□□ -1.88
VCAN-207ENST00000507162 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
VCAN-207ENST00000507162 MYMXA0A1B0GTQ4 84 aa3.31□□□□□ -1.88
VCAN-207ENST00000507162 LST1O00453 97 aa3.31□□□□□ -1.88
VCAN-207ENST00000507162 MT1BP07438 61 aa3.31□□□□□ -1.88
VCAN-207ENST00000507162 COX7BP24311 80 aa3.31□□□□□ -1.88
VCAN-207ENST00000507162 CBY1Q9Y3M2 126 aa3.31□□□□□ -1.88
VCAN-207ENST00000507162 NDUFC2O95298 119 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 DSCR10P59022 87 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 NPC2P61916 151 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 RHEBQ15382 184 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 Q5VV11 94 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 SMCO4Q9NRQ5 59 aa3.3□□□□□ -1.88
VCAN-207ENST00000507162 TRBV7-7A0A0K0K1E9 115 aa3.29□□□□□ -1.88
VCAN-207ENST00000507162 C9JQL5 133 aa3.29□□□□□ -1.88
VCAN-207ENST00000507162 HBDP02042 147 aa3.29□□□□□ -1.88
VCAN-207ENST00000507162 LINC01546A6NGU7 62 aa3.28□□□□□ -1.88
VCAN-207ENST00000507162 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
VCAN-207ENST00000507162 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
VCAN-207ENST00000507162 F8WEM9 126 aa3.27□□□□□ -1.89
VCAN-207ENST00000507162 ELOF1P60002 83 aaKnown RBP3.27□□□□□ -1.89
VCAN-207ENST00000507162 IMUPQ9GZP8 106 aa3.27□□□□□ -1.89
VCAN-207ENST00000507162 IGLV5-48A0A075B6I7 105 aa3.25□□□□□ -1.89
VCAN-207ENST00000507162 A0A1W2PNM2 257 aa3.25□□□□□ -1.89
VCAN-207ENST00000507162 PMCHL1Q16048 86 aa3.25□□□□□ -1.89
VCAN-207ENST00000507162 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
VCAN-207ENST00000507162 RPS10P5Q9NQ39 176 aa3.25□□□□□ -1.89
VCAN-207ENST00000507162 A0A1B0GWB2 263 aa3.24□□□□□ -1.89
VCAN-207ENST00000507162 A0A096LNJ9 63 aa3.23□□□□□ -1.89
VCAN-207ENST00000507162 LINC00313P59037 77 aa3.23□□□□□ -1.89
VCAN-207ENST00000507162 PEA15Q15121 130 aa3.23□□□□□ -1.89
VCAN-207ENST00000507162 ADAMTSL4-AS1Q5T5F5 129 aa3.23□□□□□ -1.89
VCAN-207ENST00000507162 Q6JHZ5 121 aa3.23□□□□□ -1.89
VCAN-207ENST00000507162 IGKV2-30P06310 120 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 TSPEAR-AS2P59090 65 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 IFITM2Q01629 132 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 RGS21Q2M5E4 152 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 CLEC2BQ92478 149 aa3.22□□□□□ -1.89
VCAN-207ENST00000507162 MT-ND4LP03901 98 aa3.21□□□□□ -1.9
VCAN-207ENST00000507162 NDUFV3P56181 108 aaKnown RBP3.21□□□□□ -1.9
VCAN-207ENST00000507162 SPINK7P58062 85 aa3.21□□□□□ -1.9
VCAN-207ENST00000507162 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
VCAN-207ENST00000507162 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
VCAN-207ENST00000507162 FAM236AA0A1B0GUQ0 79 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 FAM236BA0A1B0GV22 79 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 COLCA2A8K830 154 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 LEPROTO15243 131 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 SPANXDQ9BXN6 97 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 OCR1Q9BZK8 76 aa3.2□□□□□ -1.9
VCAN-207ENST00000507162 HSBP1L1C9JCN9 74 aa3.19□□□□□ -1.9
VCAN-207ENST00000507162 LINC00614P0C842 121 aa3.19□□□□□ -1.9
VCAN-207ENST00000507162 NMUP48645 174 aa3.19□□□□□ -1.9
VCAN-207ENST00000507162 FABP9Q0Z7S8 132 aa3.19□□□□□ -1.9
VCAN-207ENST00000507162 OCIAD2Q56VL3 154 aa3.19□□□□□ -1.9
VCAN-207ENST00000507162 TRBV7-6A0A0J9YX20 115 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 ZNF815PA8K554 130 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 E9PLD3 99 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 J3QQQ9 107 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 WFDC13Q8IUB5 93 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 SPANXCQ9NY87 97 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 SS18L2Q9UHA2 77 aa3.18□□□□□ -1.9
VCAN-207ENST00000507162 TRAV13-2A0A0B4J235 113 aa3.17□□□□□ -1.9
VCAN-207ENST00000507162 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
VCAN-207ENST00000507162 A0A0J9YXY3 114 aa3.17□□□□□ -1.9
VCAN-207ENST00000507162 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
VCAN-207ENST00000507162 LINC00308Q8TCZ7 52 aa3.16□□□□□ -1.9
VCAN-207ENST00000507162 IFI27L1Q96BM0 104 aa3.16□□□□□ -1.9
VCAN-207ENST00000507162 H1FX-AS1Q4G0G2 97 aa3.15□□□□□ -1.91
VCAN-207ENST00000507162 TCTE3Q8IZS6 198 aa3.15□□□□□ -1.91
VCAN-207ENST00000507162 NHP2Q9NX24 153 aaKnown RBP3.15□□□□□ -1.91
VCAN-207ENST00000507162 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
VCAN-207ENST00000507162 HMCN1Q96RW7 5635 aa3.14□□□□□ -1.91
VCAN-207ENST00000507162 H3BUT2 72 aa3.14□□□□□ -1.91
VCAN-207ENST00000507162 SEC11CQ9BY50 192 aa3.14□□□□□ -1.91
VCAN-207ENST00000507162 SPRR2GQ9BYE4 73 aa3.14□□□□□ -1.91
VCAN-207ENST00000507162 ZCCHC13Q8WW36 166 aaKnown RBP3.13□□□□□ -1.91
VCAN-207ENST00000507162 LITAFQ99732 161 aa3.13□□□□□ -1.91
VCAN-207ENST00000507162 A0A087WSZ3 146 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 A6NDN8 102 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 SERF1AO75920 110 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 HERVK_113P61574 105 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 C18orf32Q8TCD1 76 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 SNHG12Q9BXW3 62 aa3.12□□□□□ -1.91
VCAN-207ENST00000507162 IGKV4-1P06312 121 aa3.11□□□□□ -1.91
VCAN-207ENST00000507162 Q6ZQY7 126 aa3.11□□□□□ -1.91
VCAN-207ENST00000507162 IGHV6-1A0A0B4J1U7 121 aa3.1□□□□□ -1.91
VCAN-207ENST00000507162 VAMP3Q15836 100 aa3.1□□□□□ -1.91
VCAN-207ENST00000507162 IGKV2D-30A0A075B6S6 120 aa3.09□□□□□ -1.91
VCAN-207ENST00000507162 TEN1Q86WV5 123 aa3.09□□□□□ -1.91
VCAN-207ENST00000507162 hADV29S1A0JD25 119 aa3.08□□□□□ -1.92
VCAN-207ENST00000507162 HSBP1O75506 76 aa3.08□□□□□ -1.92
VCAN-207ENST00000507162 S100PP25815 95 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms