RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 BVES-AS1Q5T3Y7 98 aa7.8□□□□□ -1.16
HMGCS1-203ENST00000507004 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.79□□□□□ -1.16
HMGCS1-203ENST00000507004 Q6ZQY7 126 aa7.79□□□□□ -1.16
HMGCS1-203ENST00000507004 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 SCGB1D1O95968 90 aa7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 CFC1BP0CG36 223 aa7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 S100A1P23297 94 aa7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
HMGCS1-203ENST00000507004 SNCGO76070 127 aa7.77□□□□□ -1.17
HMGCS1-203ENST00000507004 OCIAD2Q56VL3 154 aa7.76□□□□□ -1.17
HMGCS1-203ENST00000507004 HIST1H4GQ99525 98 aa7.75□□□□□ -1.17
HMGCS1-203ENST00000507004 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
HMGCS1-203ENST00000507004 TRBV7-7A0A0K0K1E9 115 aa7.74□□□□□ -1.17
HMGCS1-203ENST00000507004 LCE2CQ5TA81 110 aa7.74□□□□□ -1.17
HMGCS1-203ENST00000507004 SNHG12Q9BXW3 62 aa7.74□□□□□ -1.17
HMGCS1-203ENST00000507004 DLEU1O43261 78 aa7.73□□□□□ -1.17
HMGCS1-203ENST00000507004 GHRHP01286 108 aa7.73□□□□□ -1.17
HMGCS1-203ENST00000507004 COX8AP10176 69 aa7.72□□□□□ -1.17
HMGCS1-203ENST00000507004 KRTAP19-2Q3LHN2 52 aa7.72□□□□□ -1.17
HMGCS1-203ENST00000507004 IGFL1Q6UW32 110 aa7.72□□□□□ -1.17
HMGCS1-203ENST00000507004 C12orf57Q99622 126 aa7.71□□□□□ -1.18
HMGCS1-203ENST00000507004 H0YGX0 51 aa7.7□□□□□ -1.18
HMGCS1-203ENST00000507004 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
HMGCS1-203ENST00000507004 MT1HP80294 61 aa7.69□□□□□ -1.18
HMGCS1-203ENST00000507004 RAB37Q96AX2 223 aa7.68□□□□□ -1.18
HMGCS1-203ENST00000507004 LST1O00453 97 aa7.67□□□□□ -1.18
HMGCS1-203ENST00000507004 HIGD1BQ9P298 99 aa7.67□□□□□ -1.18
HMGCS1-203ENST00000507004 A0A0B4J2C4 111 aa7.66□□□□□ -1.18
HMGCS1-203ENST00000507004 Q6Q795 121 aa7.66□□□□□ -1.18
HMGCS1-203ENST00000507004 COX6B2Q6YFQ2 88 aa7.66□□□□□ -1.18
HMGCS1-203ENST00000507004 A0A1B0GX51 115 aa7.65□□□□□ -1.18
HMGCS1-203ENST00000507004 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
HMGCS1-203ENST00000507004 Q75L30 129 aa7.65□□□□□ -1.18
HMGCS1-203ENST00000507004 CFC1P0CG37 223 aa7.63□□□□□ -1.19
HMGCS1-203ENST00000507004 TEN1Q86WV5 123 aa7.63□□□□□ -1.19
HMGCS1-203ENST00000507004 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
HMGCS1-203ENST00000507004 A6NJY4 79 aa7.62□□□□□ -1.19
HMGCS1-203ENST00000507004 H3BUT2 72 aa7.61□□□□□ -1.19
HMGCS1-203ENST00000507004 M0R2T5 61 aa7.61□□□□□ -1.19
HMGCS1-203ENST00000507004 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
HMGCS1-203ENST00000507004 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
HMGCS1-203ENST00000507004 C14orf144Q96I85 54 aa7.6□□□□□ -1.19
HMGCS1-203ENST00000507004 SPATA45Q537H7 98 aa7.59□□□□□ -1.19
HMGCS1-203ENST00000507004 VAMP8Q9BV40 100 aa7.59□□□□□ -1.19
HMGCS1-203ENST00000507004 H3BQ85 93 aa7.58□□□□□ -1.2
HMGCS1-203ENST00000507004 PAM16Q9Y3D7 125 aa7.58□□□□□ -1.2
HMGCS1-203ENST00000507004 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
HMGCS1-203ENST00000507004 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
HMGCS1-203ENST00000507004 PRO1854Q9UHT4 67 aa7.57□□□□□ -1.2
HMGCS1-203ENST00000507004 H3BMG7 143 aa7.56□□□□□ -1.2
HMGCS1-203ENST00000507004 CEND1Q8N111 149 aa7.56□□□□□ -1.2
HMGCS1-203ENST00000507004 Q96NJ1 140 aa7.56□□□□□ -1.2
HMGCS1-203ENST00000507004 CRCT1Q9UGL9 99 aa7.56□□□□□ -1.2
HMGCS1-203ENST00000507004 A0A087WSZ3 146 aa7.54□□□□□ -1.2
HMGCS1-203ENST00000507004 FABP2P12104 132 aa7.54□□□□□ -1.2
HMGCS1-203ENST00000507004 C2orf91Q6ZV80 131 aa7.54□□□□□ -1.2
HMGCS1-203ENST00000507004 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
HMGCS1-203ENST00000507004 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
HMGCS1-203ENST00000507004 DNAL4O96015 105 aa7.52□□□□□ -1.21
HMGCS1-203ENST00000507004 A8MUU9 505 aa7.51□□□□□ -1.21
HMGCS1-203ENST00000507004 TRBV20-1A0A075B6N2 111 aa7.5□□□□□ -1.21
HMGCS1-203ENST00000507004 COX6CP09669 75 aa7.5□□□□□ -1.21
HMGCS1-203ENST00000507004 ORMDL1Q9P0S3 153 aa7.49□□□□□ -1.21
HMGCS1-203ENST00000507004 TRBV7-4A0A0J9YYF1 115 aa7.48□□□□□ -1.21
HMGCS1-203ENST00000507004 ANKRD29Q8N6D5 301 aa7.48□□□□□ -1.21
HMGCS1-203ENST00000507004 FSIP2Q5CZC0 6907 aa7.48□□□□□ -1.21
HMGCS1-203ENST00000507004 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
HMGCS1-203ENST00000507004 TRIAP1O43715 76 aa7.47□□□□□ -1.21
HMGCS1-203ENST00000507004 FXYD2P54710 66 aa7.47□□□□□ -1.21
HMGCS1-203ENST00000507004 HSD52Q0P140 79 aa7.47□□□□□ -1.21
HMGCS1-203ENST00000507004 SIGMAR1Q99720 223 aa7.46□□□□□ -1.22
HMGCS1-203ENST00000507004 A0A1W2PNM2 257 aa7.45□□□□□ -1.22
HMGCS1-203ENST00000507004 PSMB2P49721 201 aa7.45□□□□□ -1.22
HMGCS1-203ENST00000507004 LINC00313P59037 77 aa7.44□□□□□ -1.22
HMGCS1-203ENST00000507004 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
HMGCS1-203ENST00000507004 IGKV4-1P06312 121 aa7.42□□□□□ -1.22
HMGCS1-203ENST00000507004 DSCR10P59022 87 aa7.41□□□□□ -1.22
HMGCS1-203ENST00000507004 UBE2V1Q13404 147 aa7.41□□□□□ -1.22
HMGCS1-203ENST00000507004 C21orf62-AS1Q17RA5 79 aa7.41□□□□□ -1.22
HMGCS1-203ENST00000507004 TRACP01848 142 aa7.4□□□□□ -1.22
HMGCS1-203ENST00000507004 CCKP06307 115 aa7.38□□□□□ -1.23
HMGCS1-203ENST00000507004 UQCR10Q9UDW1 63 aa7.38□□□□□ -1.23
HMGCS1-203ENST00000507004 PYY3Q5JQD4 70 aa7.37□□□□□ -1.23
HMGCS1-203ENST00000507004 LINC00472Q9H8W2 130 aa7.37□□□□□ -1.23
HMGCS1-203ENST00000507004 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
HMGCS1-203ENST00000507004 LCE2BO14633 110 aa7.35□□□□□ -1.23
HMGCS1-203ENST00000507004 KRTAP16-1A8MUX0 517 aa7.34□□□□□ -1.23
HMGCS1-203ENST00000507004 K7ERJ3 54 aa7.34□□□□□ -1.23
HMGCS1-203ENST00000507004 RBM3P98179 157 aaKnown RBP7.34□□□□□ -1.23
HMGCS1-203ENST00000507004 DSCR8Q96T75 97 aa7.34□□□□□ -1.23
HMGCS1-203ENST00000507004 RBM12B-AS1Q9P1G2 102 aa7.34□□□□□ -1.23
HMGCS1-203ENST00000507004 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
HMGCS1-203ENST00000507004 FAM236DA0A1B0GTK5 79 aa7.32□□□□□ -1.24
HMGCS1-203ENST00000507004 J3KT08 172 aa7.32□□□□□ -1.24
HMGCS1-203ENST00000507004 FAM236CP0DP71 79 aa7.32□□□□□ -1.24
HMGCS1-203ENST00000507004 A0A1B0GV72 72 aa7.31□□□□□ -1.24
HMGCS1-203ENST00000507004 IGHV6-1A0A0B4J1U7 121 aa7.3□□□□□ -1.24
HMGCS1-203ENST00000507004 VPS25Q9BRG1 176 aa7.29□□□□□ -1.24
HMGCS1-203ENST00000507004 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms