RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 DNAH3Q8TD57 4116 aa10.2□□□□□ -0.78
SCLT1-208ENST00000506368 LINC01556Q5JQF7 62 aa10.19□□□□□ -0.78
SCLT1-208ENST00000506368 PRB2P02812 416 aaPredicted RBP10.19□□□□□ -0.78
SCLT1-208ENST00000506368 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
SCLT1-208ENST00000506368 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
SCLT1-208ENST00000506368 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
SCLT1-208ENST00000506368 LINC00476Q8WZB0 136 aa10.16□□□□□ -0.78
SCLT1-208ENST00000506368 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
SCLT1-208ENST00000506368 LINC00588Q9Y4M8 146 aa10.16□□□□□ -0.78
SCLT1-208ENST00000506368 RPL37AP8A6NKH3 93 aa10.15□□□□□ -0.78
SCLT1-208ENST00000506368 KRTAP29-1A8MX34 341 aaPredicted RBP10.15□□□□□ -0.78
SCLT1-208ENST00000506368 PRR4Q16378 134 aa10.15□□□□□ -0.78
SCLT1-208ENST00000506368 KTN1-AS1Q86SY8 53 aa10.15□□□□□ -0.78
SCLT1-208ENST00000506368 ATP11AUNQ6ZP68 121 aa10.14□□□□□ -0.79
SCLT1-208ENST00000506368 MEGF8Q7Z7M0 2845 aa10.14□□□□□ -0.79
SCLT1-208ENST00000506368 CHKB-CPT1BH3BT56 60 aa10.13□□□□□ -0.79
SCLT1-208ENST00000506368 H0Y9P7 68 aa10.13□□□□□ -0.79
SCLT1-208ENST00000506368 Q75L30 129 aa10.13□□□□□ -0.79
SCLT1-208ENST00000506368 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
SCLT1-208ENST00000506368 NDUFS5O43920 106 aa10.12□□□□□ -0.79
SCLT1-208ENST00000506368 IGFL1Q6UW32 110 aa10.11□□□□□ -0.79
SCLT1-208ENST00000506368 WFDC13Q8IUB5 93 aa10.11□□□□□ -0.79
SCLT1-208ENST00000506368 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
SCLT1-208ENST00000506368 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
SCLT1-208ENST00000506368 CASC2Q6XLA1 102 aa10.08□□□□□ -0.8
SCLT1-208ENST00000506368 C16orf90A8MZG2 172 aa10.08□□□□□ -0.8
SCLT1-208ENST00000506368 PRR15LQ9BU68 103 aa10.08□□□□□ -0.8
SCLT1-208ENST00000506368 PRKDCP78527 4128 aaKnown RBP10.07□□□□□ -0.8
SCLT1-208ENST00000506368 DNAH10OSP0CZ25 163 aa10.06□□□□□ -0.8
SCLT1-208ENST00000506368 A0A087WSZ3 146 aa10.05□□□□□ -0.8
SCLT1-208ENST00000506368 PHF5AQ7RTV0 110 aaKnown RBP10.05□□□□□ -0.8
SCLT1-208ENST00000506368 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
SCLT1-208ENST00000506368 A8MWP4 228 aa10.04□□□□□ -0.8
SCLT1-208ENST00000506368 K7EIL1 84 aa10.04□□□□□ -0.8
SCLT1-208ENST00000506368 FAM168BA1KXE4 195 aa10.03□□□□□ -0.8
SCLT1-208ENST00000506368 FBN3Q75N90 2809 aa10.03□□□□□ -0.8
SCLT1-208ENST00000506368 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
SCLT1-208ENST00000506368 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
SCLT1-208ENST00000506368 CDC42SE1Q9NRR8 79 aa10.02□□□□□ -0.81
SCLT1-208ENST00000506368 COA5Q86WW8 74 aa10□□□□□ -0.81
SCLT1-208ENST00000506368 A6NED7 52 aa10□□□□□ -0.81
SCLT1-208ENST00000506368 COL7A1Q02388 2944 aa10□□□□□ -0.81
SCLT1-208ENST00000506368 CNBPP62633 177 aaKnown RBP9.99□□□□□ -0.81
SCLT1-208ENST00000506368 DNAH9Q9NYC9 4486 aa9.98□□□□□ -0.81
SCLT1-208ENST00000506368 A6NN06 94 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 SPRR1BP22528 89 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 DEFB116Q30KQ4 102 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 LCA10Q71F78 164 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 TP53AIP1Q9HCN2 124 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 LINC00472Q9H8W2 130 aa9.97□□□□□ -0.81
SCLT1-208ENST00000506368 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.81
SCLT1-208ENST00000506368 A8MU10 97 aa9.95□□□□□ -0.82
SCLT1-208ENST00000506368 RBM12B-AS1Q9P1G2 102 aa9.95□□□□□ -0.82
SCLT1-208ENST00000506368 HUWE1Q7Z6Z7 4374 aaKnown RBP9.95□□□□□ -0.82
SCLT1-208ENST00000506368 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
SCLT1-208ENST00000506368 RETNQ9HD89 108 aa9.94□□□□□ -0.82
SCLT1-208ENST00000506368 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
SCLT1-208ENST00000506368 TENM3Q9P273 2699 aa9.93□□□□□ -0.82
SCLT1-208ENST00000506368 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
SCLT1-208ENST00000506368 H0Y9J4 135 aa9.92□□□□□ -0.82
SCLT1-208ENST00000506368 TGP01266 2768 aa9.92□□□□□ -0.82
SCLT1-208ENST00000506368 C7orf65Q6ZTY9 151 aa9.91□□□□□ -0.82
SCLT1-208ENST00000506368 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
SCLT1-208ENST00000506368 A0A0G2JQZ4 141 aa9.88□□□□□ -0.83
SCLT1-208ENST00000506368 A0A1W2PNN7 141 aa9.88□□□□□ -0.83
SCLT1-208ENST00000506368 MOBPQ13875 183 aa9.88□□□□□ -0.83
SCLT1-208ENST00000506368 PRLHP81277 87 aa9.87□□□□□ -0.83
SCLT1-208ENST00000506368 ASB16-AS1Q495Z4 193 aa9.86□□□□□ -0.83
SCLT1-208ENST00000506368 Q6ZR54 194 aa9.86□□□□□ -0.83
SCLT1-208ENST00000506368 C11orf45Q8TAV5 145 aa9.86□□□□□ -0.83
SCLT1-208ENST00000506368 CASC10Q5T4H9 136 aa9.81□□□□□ -0.84
SCLT1-208ENST00000506368 STAB2Q8WWQ8 2551 aa9.79□□□□□ -0.84
SCLT1-208ENST00000506368 SPAG11AQ6PDA7 123 aa9.78□□□□□ -0.84
SCLT1-208ENST00000506368 A0A096LNI7 61 aa9.77□□□□□ -0.85
SCLT1-208ENST00000506368 IGKV2-24A0A0C4DH68 120 aa9.76□□□□□ -0.85
SCLT1-208ENST00000506368 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
SCLT1-208ENST00000506368 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
SCLT1-208ENST00000506368 HRES1P13985 223 aa9.73□□□□□ -0.85
SCLT1-208ENST00000506368 A0A087X002 238 aa9.71□□□□□ -0.86
SCLT1-208ENST00000506368 C14orf177Q52M58 125 aa9.71□□□□□ -0.86
SCLT1-208ENST00000506368 Q96NJ1 140 aa9.7□□□□□ -0.86
SCLT1-208ENST00000506368 CSMD3Q7Z407 3707 aa9.69□□□□□ -0.86
SCLT1-208ENST00000506368 SPINK7P58062 85 aa9.68□□□□□ -0.86
SCLT1-208ENST00000506368 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
SCLT1-208ENST00000506368 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
SCLT1-208ENST00000506368 A0A1B0GVX0 72 aa9.67□□□□□ -0.86
SCLT1-208ENST00000506368 CDK2AP2O75956 126 aa9.65□□□□□ -0.87
SCLT1-208ENST00000506368 KRTAP13-1Q8IUC0 172 aa9.62□□□□□ -0.87
SCLT1-208ENST00000506368 DNAH1Q9P2D7 4330 aa9.62□□□□□ -0.87
SCLT1-208ENST00000506368 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
SCLT1-208ENST00000506368 ACYP2P14621 99 aa9.6□□□□□ -0.87
SCLT1-208ENST00000506368 TENM2Q9NT68 2774 aa9.59□□□□□ -0.87
SCLT1-208ENST00000506368 LINC00483Q53H64 154 aa9.59□□□□□ -0.87
SCLT1-208ENST00000506368 KRTAP11-1Q8IUC1 163 aa9.59□□□□□ -0.87
SCLT1-208ENST00000506368 PLA2G1BP04054 148 aaKnown RBP9.58□□□□□ -0.88
SCLT1-208ENST00000506368 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
SCLT1-208ENST00000506368 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
SCLT1-208ENST00000506368 LYSTQ99698 3801 aa9.57□□□□□ -0.88
SCLT1-208ENST00000506368 PLECQ15149 4684 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms