RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 IGFL1Q6UW32 110 aa7.51□□□□□ -1.21
UBE3D-206ENST00000505226 COL6A5A8TX70 2615 aa7.5□□□□□ -1.21
UBE3D-206ENST00000505226 PSCAO43653 123 aa7.49□□□□□ -1.21
UBE3D-206ENST00000505226 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
UBE3D-206ENST00000505226 PRLHP81277 87 aa7.49□□□□□ -1.21
UBE3D-206ENST00000505226 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
UBE3D-206ENST00000505226 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
UBE3D-206ENST00000505226 PRR4Q16378 134 aa7.47□□□□□ -1.21
UBE3D-206ENST00000505226 V9GYY9 64 aa7.47□□□□□ -1.21
UBE3D-206ENST00000505226 RPL37AP61513 92 aaKnown RBP7.46□□□□□ -1.21
UBE3D-206ENST00000505226 A0A096LNI7 61 aa7.46□□□□□ -1.22
UBE3D-206ENST00000505226 SEC61GP60059 68 aa7.46□□□□□ -1.22
UBE3D-206ENST00000505226 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.22
UBE3D-206ENST00000505226 KRTAP11-1Q8IUC1 163 aa7.46□□□□□ -1.22
UBE3D-206ENST00000505226 A0A087WSZ3 146 aa7.45□□□□□ -1.22
UBE3D-206ENST00000505226 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
UBE3D-206ENST00000505226 IGKV2-24A0A0C4DH68 120 aa7.45□□□□□ -1.22
UBE3D-206ENST00000505226 COL7A1Q02388 2944 aa7.44□□□□□ -1.22
UBE3D-206ENST00000505226 KRTAP24-1Q3LI83 254 aa7.44□□□□□ -1.22
UBE3D-206ENST00000505226 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
UBE3D-206ENST00000505226 DNAH7Q8WXX0 4024 aa7.43□□□□□ -1.22
UBE3D-206ENST00000505226 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
UBE3D-206ENST00000505226 IGLV8-61A0A075B6I0 122 aa7.42□□□□□ -1.22
UBE3D-206ENST00000505226 KRTAP29-1A8MX34 341 aaPredicted RBP7.41□□□□□ -1.22
UBE3D-206ENST00000505226 Q1T7F1 81 aa7.4□□□□□ -1.23
UBE3D-206ENST00000505226 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.23
UBE3D-206ENST00000505226 C16orf90A8MZG2 172 aa7.39□□□□□ -1.23
UBE3D-206ENST00000505226 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
UBE3D-206ENST00000505226 STAB2Q8WWQ8 2551 aa7.38□□□□□ -1.23
UBE3D-206ENST00000505226 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
UBE3D-206ENST00000505226 PSPHP1O15172 72 aa7.37□□□□□ -1.23
UBE3D-206ENST00000505226 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
UBE3D-206ENST00000505226 TRAV22A0A0B4J277 110 aa7.37□□□□□ -1.23
UBE3D-206ENST00000505226 UBE2AP49459 152 aa7.37□□□□□ -1.23
UBE3D-206ENST00000505226 CNBPP62633 177 aaKnown RBP7.37□□□□□ -1.23
UBE3D-206ENST00000505226 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.23
UBE3D-206ENST00000505226 PRR15Q8IV56 129 aa7.34□□□□□ -1.23
UBE3D-206ENST00000505226 MP68P56378 58 aa7.33□□□□□ -1.24
UBE3D-206ENST00000505226 CASC2Q6XLA1 102 aa7.33□□□□□ -1.24
UBE3D-206ENST00000505226 K7EIL1 84 aa7.33□□□□□ -1.24
UBE3D-206ENST00000505226 H0Y9P7 68 aa7.32□□□□□ -1.24
UBE3D-206ENST00000505226 NDUFB1O75438 58 aa7.32□□□□□ -1.24
UBE3D-206ENST00000505226 SPRR1BP22528 89 aa7.31□□□□□ -1.24
UBE3D-206ENST00000505226 B9D2Q9BPU9 175 aa7.31□□□□□ -1.24
UBE3D-206ENST00000505226 A8MWP4 228 aa7.31□□□□□ -1.24
UBE3D-206ENST00000505226 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
UBE3D-206ENST00000505226 A8MU10 97 aa7.3□□□□□ -1.24
UBE3D-206ENST00000505226 A8MUN3 132 aa7.3□□□□□ -1.24
UBE3D-206ENST00000505226 PANO1I0J062 215 aa7.3□□□□□ -1.24
UBE3D-206ENST00000505226 MGAM2Q2M2H8 2515 aa7.3□□□□□ -1.24
UBE3D-206ENST00000505226 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
UBE3D-206ENST00000505226 H0Y9J4 135 aa7.28□□□□□ -1.24
UBE3D-206ENST00000505226 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
UBE3D-206ENST00000505226 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
UBE3D-206ENST00000505226 SPANXA2-OT1Q8N9U9 137 aa7.26□□□□□ -1.25
UBE3D-206ENST00000505226 FRAS1Q86XX4 4008 aa7.26□□□□□ -1.25
UBE3D-206ENST00000505226 Q5VV11 94 aa7.25□□□□□ -1.25
UBE3D-206ENST00000505226 PMAIP1Q13794 54 aa7.25□□□□□ -1.25
UBE3D-206ENST00000505226 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
UBE3D-206ENST00000505226 Q8N9P0 234 aaPredicted RBP7.24□□□□□ -1.25
UBE3D-206ENST00000505226 Q96NJ1 140 aa7.24□□□□□ -1.25
UBE3D-206ENST00000505226 H3BPC8 53 aa7.23□□□□□ -1.25
UBE3D-206ENST00000505226 APLNQ9ULZ1 77 aa7.22□□□□□ -1.25
UBE3D-206ENST00000505226 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.25
UBE3D-206ENST00000505226 UBE2DNLQ8IWF7 75 aa7.21□□□□□ -1.26
UBE3D-206ENST00000505226 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
UBE3D-206ENST00000505226 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
UBE3D-206ENST00000505226 ASB16-AS1Q495Z4 193 aa7.19□□□□□ -1.26
UBE3D-206ENST00000505226 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
UBE3D-206ENST00000505226 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
UBE3D-206ENST00000505226 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
UBE3D-206ENST00000505226 MOBPQ13875 183 aa7.18□□□□□ -1.26
UBE3D-206ENST00000505226 IGLV7-46A0A075B6I9 117 aa7.17□□□□□ -1.26
UBE3D-206ENST00000505226 CD164Q04900 197 aa7.17□□□□□ -1.26
UBE3D-206ENST00000505226 COA5Q86WW8 74 aa7.17□□□□□ -1.26
UBE3D-206ENST00000505226 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
UBE3D-206ENST00000505226 PRR15LQ9BU68 103 aa7.16□□□□□ -1.26
UBE3D-206ENST00000505226 STARD9Q9P2P6 4700 aa7.15□□□□□ -1.26
UBE3D-206ENST00000505226 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
UBE3D-206ENST00000505226 A0A087X002 238 aa7.14□□□□□ -1.27
UBE3D-206ENST00000505226 NOTCH2NLQ7Z3S9 236 aa7.14□□□□□ -1.27
UBE3D-206ENST00000505226 LIMD2Q9BT23 127 aa7.14□□□□□ -1.27
UBE3D-206ENST00000505226 ANAPC11Q9NYG5 84 aa7.14□□□□□ -1.27
UBE3D-206ENST00000505226 C8orf17Q9NRJ1 99 aa7.14□□□□□ -1.27
UBE3D-206ENST00000505226 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
UBE3D-206ENST00000505226 DNAH2Q9P225 4427 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 DNAH17Q9UFH2 4485 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 NBDYA0A0U1RRE5 68 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 IGHV6-1A0A0B4J1U7 121 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 Q6ZR54 194 aa7.12□□□□□ -1.27
UBE3D-206ENST00000505226 KMT2AQ03164 3969 aa7.11□□□□□ -1.27
UBE3D-206ENST00000505226 LINC00483Q53H64 154 aa7.11□□□□□ -1.27
UBE3D-206ENST00000505226 LCA10Q71F78 164 aa7.11□□□□□ -1.27
UBE3D-206ENST00000505226 FBN3Q75N90 2809 aa7.1□□□□□ -1.27
UBE3D-206ENST00000505226 WWC2-AS2Q96NR7 200 aa7.1□□□□□ -1.27
UBE3D-206ENST00000505226 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
UBE3D-206ENST00000505226 LOC101927531A0A1B0GV80 90 aa7.09□□□□□ -1.27
UBE3D-206ENST00000505226 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
UBE3D-206ENST00000505226 NDUFS5O43920 106 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms