RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 PRLHP81277 87 aa1.14□□□□□ -2.23
LINC01088-202ENST00000505149 PDE4DIPQ5VU43 2346 aa1.14□□□□□ -2.23
LINC01088-202ENST00000505149 FAM208BQ5VWN6 2430 aa1.13□□□□□ -2.23
LINC01088-202ENST00000505149 A8MTW9 85 aa1.12□□□□□ -2.23
LINC01088-202ENST00000505149 TMEM167AQ8TBQ9 72 aa1.12□□□□□ -2.23
LINC01088-202ENST00000505149 K7EIM0 57 aa1.11□□□□□ -2.23
LINC01088-202ENST00000505149 CLPSL2Q6UWE3 100 aa1.11□□□□□ -2.23
LINC01088-202ENST00000505149 DEFB104AQ8WTQ1 72 aa1.11□□□□□ -2.23
LINC01088-202ENST00000505149 S4R3F8 94 aa1.11□□□□□ -2.23
LINC01088-202ENST00000505149 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
LINC01088-202ENST00000505149 HELZ2Q9BYK8 2649 aaKnown RBP1.1□□□□□ -2.23
LINC01088-202ENST00000505149 JMJD1CQ15652 2540 aa1.1□□□□□ -2.23
LINC01088-202ENST00000505149 KLK9Q2XQG4 91 aa1.1□□□□□ -2.23
LINC01088-202ENST00000505149 DOPEY2Q9Y3R5 2298 aa1.1□□□□□ -2.23
LINC01088-202ENST00000505149 KNL1Q8NG31 2342 aa1.09□□□□□ -2.23
LINC01088-202ENST00000505149 PTPRQQ9UMZ3 2332 aa1.09□□□□□ -2.23
LINC01088-202ENST00000505149 DEFB106AQ8N104 65 aa1.09□□□□□ -2.23
LINC01088-202ENST00000505149 NOP10Q9NPE3 64 aaKnown RBP1.09□□□□□ -2.23
LINC01088-202ENST00000505149 ZDBF2Q9HCK1 2354 aa1.09□□□□□ -2.23
LINC01088-202ENST00000505149 RPL39P5Q59GN2 51 aa1.08□□□□□ -2.24
LINC01088-202ENST00000505149 NAV3Q8IVL0 2385 aa1.07□□□□□ -2.24
LINC01088-202ENST00000505149 SPINK1P00995 79 aa1.07□□□□□ -2.24
LINC01088-202ENST00000505149 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
LINC01088-202ENST00000505149 CNTRLQ7Z7A1 2325 aa1.06□□□□□ -2.24
LINC01088-202ENST00000505149 DEFB108AA8MXU0 73 aa1.06□□□□□ -2.24
LINC01088-202ENST00000505149 TPRP12270 2363 aaKnown RBP1.06□□□□□ -2.24
LINC01088-202ENST00000505149 PIEZO2Q9H5I5 2752 aa1.06□□□□□ -2.24
LINC01088-202ENST00000505149 PTPRZ1P23471 2315 aaPredicted RBP1.05□□□□□ -2.24
LINC01088-202ENST00000505149 A0A0D9SG42 100 aa1.05□□□□□ -2.24
LINC01088-202ENST00000505149 ROS1P08922 2347 aa1.04□□□□□ -2.24
LINC01088-202ENST00000505149 PLCE1Q9P212 2302 aa1.04□□□□□ -2.24
LINC01088-202ENST00000505149 PKDREJQ9NTG1 2253 aa1.04□□□□□ -2.24
LINC01088-202ENST00000505149 REV3LO60673 3130 aa1.03□□□□□ -2.24
LINC01088-202ENST00000505149 PCNX1Q96RV3 2341 aa1.03□□□□□ -2.25
LINC01088-202ENST00000505149 USF3Q68DE3 2245 aa1.01□□□□□ -2.25
LINC01088-202ENST00000505149 ZNF462Q96JM2 2506 aa1□□□□□ -2.25
LINC01088-202ENST00000505149 C2CD3Q4AC94 2353 aa0.99□□□□□ -2.25
LINC01088-202ENST00000505149 IGF2RP11717 2491 aa0.98□□□□□ -2.25
LINC01088-202ENST00000505149 SPTBN2O15020 2390 aa0.98□□□□□ -2.25
LINC01088-202ENST00000505149 M0QZ58 72 aa0.98□□□□□ -2.25
LINC01088-202ENST00000505149 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
LINC01088-202ENST00000505149 DSPP15924 2871 aaKnown RBP0.96□□□□□ -2.26
LINC01088-202ENST00000505149 SPTBN1Q01082 2364 aaKnown RBP0.96□□□□□ -2.26
LINC01088-202ENST00000505149 H0YGG7 62 aa0.96□□□□□ -2.26
LINC01088-202ENST00000505149 APELAP0DMC3 54 aa0.96□□□□□ -2.26
LINC01088-202ENST00000505149 RP1L1Q8IWN7 2480 aaPredicted RBP0.96□□□□□ -2.26
LINC01088-202ENST00000505149 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
LINC01088-202ENST00000505149 ABCA2Q9BZC7 2435 aa0.94□□□□□ -2.26
LINC01088-202ENST00000505149 H3BUX3 64 aa0.94□□□□□ -2.26
LINC01088-202ENST00000505149 STATHP02808 62 aa0.93□□□□□ -2.26
LINC01088-202ENST00000505149 CSPG4Q6UVK1 2322 aa0.93□□□□□ -2.26
LINC01088-202ENST00000505149 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
LINC01088-202ENST00000505149 DEFB135Q30KP9 77 aa0.92□□□□□ -2.26
LINC01088-202ENST00000505149 TRANK1O15050 2925 aa0.92□□□□□ -2.26
LINC01088-202ENST00000505149 HTN1P15515 57 aa0.91□□□□□ -2.26
LINC01088-202ENST00000505149 DEFB1P60022 68 aa0.9□□□□□ -2.27
LINC01088-202ENST00000505149 KRTAP10-4P60372 401 aaPredicted RBP0.9□□□□□ -2.27
LINC01088-202ENST00000505149 RHPN1-AS1Q9BWJ2 59 aa0.9□□□□□ -2.27
LINC01088-202ENST00000505149 CACNA1HO95180 2353 aa0.9□□□□□ -2.27
LINC01088-202ENST00000505149 MEGF8Q7Z7M0 2845 aa0.89□□□□□ -2.27
LINC01088-202ENST00000505149 ABCA12Q86UK0 2595 aa0.89□□□□□ -2.27
LINC01088-202ENST00000505149 WNK1Q9H4A3 2382 aa0.89□□□□□ -2.27
LINC01088-202ENST00000505149 SPART-AS1P0CW21 52 aa0.89□□□□□ -2.27
LINC01088-202ENST00000505149 M0R2T5 61 aa0.88□□□□□ -2.27
LINC01088-202ENST00000505149 PKD1L2Q7Z442 2459 aa0.88□□□□□ -2.27
LINC01088-202ENST00000505149 GVINP1Q7Z2Y8 2422 aa0.87□□□□□ -2.27
LINC01088-202ENST00000505149 AKAP6Q13023 2319 aa0.87□□□□□ -2.27
LINC01088-202ENST00000505149 TNP1P09430 55 aa0.87□□□□□ -2.27
LINC01088-202ENST00000505149 COX14Q96I36 57 aa0.87□□□□□ -2.27
LINC01088-202ENST00000505149 TTC28Q96AY4 2481 aa0.87□□□□□ -2.27
LINC01088-202ENST00000505149 F8P00451 2351 aa0.86□□□□□ -2.27
LINC01088-202ENST00000505149 CHD7Q9P2D1 2997 aa0.86□□□□□ -2.27
LINC01088-202ENST00000505149 KRTAP5-10Q6L8G5 202 aa0.86□□□□□ -2.27
LINC01088-202ENST00000505149 SPINK6Q6UWN8 80 aa0.86□□□□□ -2.27
LINC01088-202ENST00000505149 ZNF292O60281 2723 aa0.85□□□□□ -2.27
LINC01088-202ENST00000505149 A0A096LNI7 61 aa0.85□□□□□ -2.27
LINC01088-202ENST00000505149 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
LINC01088-202ENST00000505149 PRRC2CQ9Y520 2896 aaKnown RBP0.85□□□□□ -2.27
LINC01088-202ENST00000505149 EP300Q09472 2414 aaPredicted RBP0.85□□□□□ -2.27
LINC01088-202ENST00000505149 CSMD3Q7Z407 3707 aa0.85□□□□□ -2.27
LINC01088-202ENST00000505149 CELSR1Q9NYQ6 3014 aa0.84□□□□□ -2.27
LINC01088-202ENST00000505149 DEFB136Q30KP8 78 aa0.84□□□□□ -2.27
LINC01088-202ENST00000505149 DEFB108BQ8NET1 73 aa0.84□□□□□ -2.27
LINC01088-202ENST00000505149 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
LINC01088-202ENST00000505149 SPTA1P02549 2419 aa0.84□□□□□ -2.28
LINC01088-202ENST00000505149 HECTD1Q9ULT8 2610 aa0.84□□□□□ -2.28
LINC01088-202ENST00000505149 CHD9Q3L8U1 2897 aa0.82□□□□□ -2.28
LINC01088-202ENST00000505149 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
LINC01088-202ENST00000505149 H3BNG1 76 aa0.82□□□□□ -2.28
LINC01088-202ENST00000505149 CEP290O15078 2479 aa0.82□□□□□ -2.28
LINC01088-202ENST00000505149 MYCBP2O75592 4640 aa0.82□□□□□ -2.28
LINC01088-202ENST00000505149 SRRM2Q9UQ35 2752 aaKnown RBP0.82□□□□□ -2.28
LINC01088-202ENST00000505149 DMBT1Q9UGM3 2413 aaPredicted RBP0.81□□□□□ -2.28
LINC01088-202ENST00000505149 DNAH11Q96DT5 4516 aa0.81□□□□□ -2.28
LINC01088-202ENST00000505149 AKAP13Q12802 2813 aa0.81□□□□□ -2.28
LINC01088-202ENST00000505149 SMR3AQ99954 134 aa0.81□□□□□ -2.28
LINC01088-202ENST00000505149 NCOR1O75376 2440 aa0.81□□□□□ -2.28
LINC01088-202ENST00000505149 ACACAQ13085 2346 aa0.81□□□□□ -2.28
LINC01088-202ENST00000505149 TENM4Q6N022 2769 aa0.8□□□□□ -2.28
LINC01088-202ENST00000505149 POLQO75417 2590 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms